Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_C07
         (1185 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024807-2|AAF59528.2|  431|Caenorhabditis elegans Hypothetical ...   239   3e-63
U64862-7|AAB52622.1|  374|Caenorhabditis elegans Hypothetical pr...    33   0.39 
AC006685-2|AAK84573.1|  334|Caenorhabditis elegans Hypothetical ...    31   1.6  
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr...    29   8.5  

>AC024807-2|AAF59528.2|  431|Caenorhabditis elegans Hypothetical
            protein Y53G8AL.2 protein.
          Length = 431

 Score =  239 bits (585), Expect = 3e-63
 Identities = 131/282 (46%), Positives = 172/282 (60%), Gaps = 1/282 (0%)
 Frame = +2

Query: 161  QATSKLLHXNGSMSVVYIKAANYSSDRKPNLAAYKRGTGGRXSFNGIVATVFGCTGFVGR 340
            QA S +   N S +V   + A+         A +++G GGR SF+G V TVFG +GF+G 
Sbjct: 14   QAVSVVGSQNFSSAVTSAENAHPEPRVSSQSAQFRKGAGGRASFSGNVVTVFGASGFLGL 73

Query: 341  YVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVI 520
             V NK  K G+Q+I+PYR D Y  +  KV G+LGQVL+ P+ L+DEESI KAV+YSNVVI
Sbjct: 74   PVVNKFAKNGSQIIIPYRQDPYYMREHKVLGELGQVLYFPFELMDEESIRKAVKYSNVVI 133

Query: 521  NLLGXDYETXNFKYNDVHVDGVRRIARICREEGVERFIHLSYLNAEEHPKPLVLKKPSAW 700
            NL+G    T  + Y DV+  G RR+ARIC+E GVE+F+HLS L A   P+       S +
Sbjct: 134  NLIGTRVPTGKYNYYDVNDTGARRLARICKEMGVEKFVHLSALGATTQPQKGHFVAKSQF 193

Query: 701  XISKYXGECAVREEYPTATIIRASDIYGSEDRFSRSLVNKMR-SHSXLMPLYKNGLXTVK 877
              SK  GE AVREE+P ATIIR S IYG  D F +  V++ R +    + LYK G  T K
Sbjct: 194  LHSKGLGEVAVREEFPEATIIRPSVIYGELDGFIQYYVSRWRKTPLDYVYLYKKGEETYK 253

Query: 878  QPVFVSDVAQGIVNAXRDXDTKCEVYXAVGPKXYLLADXVDW 1003
             P++V DVA GI +A  D   K   Y  VGP  Y L++ +D+
Sbjct: 254  MPIWVGDVAAGIQSAVNDPTAKGHTYEFVGPHCYQLSELIDF 295


>U64862-7|AAB52622.1|  374|Caenorhabditis elegans Hypothetical
           protein ZC8.1 protein.
          Length = 374

 Score = 33.1 bits (72), Expect = 0.39
 Identities = 26/127 (20%), Positives = 61/127 (48%), Gaps = 5/127 (3%)
 Frame = +2

Query: 311 VFGCTGFVGRYVCNKLGKIGT-QLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESI 487
           + G  GF+G +V + L KIG  + I+       + + +K+  D   + +     LD++ +
Sbjct: 6   IVGGGGFLGAHVISALQKIGCKERIIVVDPCPQEFKTIKI--DKSNISYIKASFLDDKVL 63

Query: 488 AKAVRYSNVVINLLGXDYETX----NFKYNDVHVDGVRRIARICREEGVERFIHLSYLNA 655
              +  ++ V++L    +           ++ +V+G +++ + C+  GV+RF++ S +  
Sbjct: 64  ENILNGASAVVHLAAVGHTGLIAGDRKSVHNFNVNGTKQLIKQCKALGVKRFLYASSVAV 123

Query: 656 EEHPKPL 676
               +PL
Sbjct: 124 SFIGEPL 130


>AC006685-2|AAK84573.1|  334|Caenorhabditis elegans Hypothetical
           protein T13G4.4 protein.
          Length = 334

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = +3

Query: 525 YLDXIMKLXISNTMMFTLMV*EELPESAEKKELRDSF 635
           +LD  +K+  SNT  F   + + +PE+AEK+EL + +
Sbjct: 111 FLDLEVKVITSNTYHFGSTLDKTIPENAEKRELYEKY 147


>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
           protein F29G6.1 protein.
          Length = 1170

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 328 ICRTLCVQQIGKNWYPVNFTIQRRFL*CPKVESVRRFRPGPV 453
           +C    +  I +  Y VN T+Q   + CP VES    +P PV
Sbjct: 660 LCEYQMLSCIFERGYGVNLTVQYIGVCCPPVESCDTEKPDPV 701


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,463,588
Number of Sequences: 27780
Number of extensions: 415724
Number of successful extensions: 707
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3245116438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)