Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_C05
(1189 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1559 - 27873345-27873407,27873549-27873830,27874162-278742... 46 8e-05
05_03_0023 + 7457836-7457976,7458313-7458480 41 0.002
03_06_0337 + 33224333-33224479,33224603-33224663,33224740-332247... 41 0.002
02_05_0796 + 31800256-31800528,31800635-31800758,31802642-318027... 37 0.036
05_01_0112 - 757514-758444,758525-758571,759074-759236,759861-76... 36 0.062
04_04_1294 - 32424762-32426309 35 0.11
09_06_0308 - 22199389-22199451,22199604-22199924,22200178-222004... 34 0.19
07_03_0252 - 15846143-15848473 33 0.58
05_03_0025 + 7462272-7462412,7462865-7463032 32 0.77
01_05_0696 - 24366857-24368200 31 2.3
03_06_0507 + 34404843-34404968,34405091-34405151,34405260-344052... 30 3.1
02_05_0810 - 31934965-31935013,31935096-31935217,31935328-319355... 30 3.1
08_01_0620 - 5416197-5416225,5416333-5416652,5417144-5417235,541... 30 4.1
06_01_0824 - 6219477-6219556,6220427-6220808,6221415-6221448,622... 29 9.5
>08_02_1559 -
27873345-27873407,27873549-27873830,27874162-27874263,
27874402-27874872
Length = 305
Score = 45.6 bits (103), Expect = 8e-05
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Frame = +1
Query: 241 LPSASRAARGGLAVDXXSIPHRPPFIAHISNLPYXVEXSAIAXLFADL-KVTNLSL--PX 411
L + +RAA G V+ P F A++ NLP+ V+ S + LF++ +V N S+
Sbjct: 197 LLNVNRAAPRGSRVERPPRQFAPAFRAYVGNLPWQVDDSRLLQLFSEHGEVVNASVVYDR 256
Query: 412 XGDRLKGHGYVDFEXRENLIEALNMPD-LTIGGRRVRIEVS 531
R +G G+V +E L +A++ D + GR +R+ V+
Sbjct: 257 ESGRSRGFGFVSMASKEELDDAISALDGQELDGRPLRVNVA 297
>05_03_0023 + 7457836-7457976,7458313-7458480
Length = 102
Score = 41.1 bits (92), Expect = 0.002
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +1
Query: 322 HISNLPYXVEXSAIAXLFADLKVTNLSLPXXGD--RLKGHGYVDFEXRENLIEALN-MPD 492
++ NLPY V+ + FAD + + + R +G G+V+FE E++ A++ M
Sbjct: 21 YVGNLPYSVDEQTLMDYFADYGAISAEIAWDSEMGRPRGFGFVNFEDNESVNAAIHGMNG 80
Query: 493 LTIGGRRVRI 522
IGGR+V +
Sbjct: 81 QDIGGRKVTV 90
>03_06_0337 +
33224333-33224479,33224603-33224663,33224740-33224776,
33225237-33225367,33225447-33225590,33225686-33225776,
33225973-33226106,33226234-33226373,33227328-33227426,
33227520-33227602,33227690-33227744,33227826-33227937,
33228274-33228766,33228881-33229094,33229203-33229273,
33229733-33229901,33229991-33230120,33230556-33230968,
33231059-33231262
Length = 975
Score = 41.1 bits (92), Expect = 0.002
Identities = 23/96 (23%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Frame = +1
Query: 259 AARGGLAVDXXSIPHRPPFIAHISNLPYXVEXSAIAXLFADLKVTN---LSLPXXGDRLK 429
A GG A + H P + +SNLPY + S + +F+++ + P + +
Sbjct: 17 ATEGGAATGGGAGGHSPSTV-FVSNLPYTFKSSDLEAVFSEVGPVRRCFMVAPKGSETSR 75
Query: 430 GHGYVDFEXRENLIEALNMPD-LTIGGRRVRIEVST 534
G G+V F ++ ++ D ++ GR++R++++T
Sbjct: 76 GFGFVQFATVQDAERSIQQKDGFSVAGRKIRVKLAT 111
>02_05_0796 +
31800256-31800528,31800635-31800758,31802642-31802771,
31804336-31804414,31804848-31805133,31805273-31805385
Length = 334
Score = 36.7 bits (81), Expect = 0.036
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 421 RLKGHGYVDFEXRENLIEALNMPDLTIGGRRVRIEVST 534
R KG+G+V F E+ EA+ P+ TIGGRR +++
Sbjct: 85 RSKGYGFVTFREPESAREAVRNPNPTIGGRRANCNIAS 122
>05_01_0112 -
757514-758444,758525-758571,759074-759236,759861-760366
Length = 548
Score = 35.9 bits (79), Expect = 0.062
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +1
Query: 322 HISNLPYXVEXSAIAXLFADLKVTNLSL---PXXGDRLKGHGYVDFEXRENLIEALNMPD 492
++ NL + + + F+D K++++ GD KG+ +VDF ++ A+ +
Sbjct: 270 YVGNLAWDITEDDLKKFFSDCKISSIRFGTDKETGD-FKGYVHVDFSEGTSVAVAMKLDQ 328
Query: 493 LTIGGRRVRIEVSTP 537
I GR VRI + P
Sbjct: 329 KVIKGRPVRIRCAVP 343
>04_04_1294 - 32424762-32426309
Length = 515
Score = 35.1 bits (77), Expect = 0.11
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 373 FADLKVTNLSLPXXGDRLKGHGYVDFEXRENLIEALNMPDLTIGGR 510
F +L+ + R KG+G+V F R + + AL P L IGGR
Sbjct: 137 FGELEDCRVISDKQSGRSKGYGFVLFRSRRSALRALRRPQLQIGGR 182
>09_06_0308 -
22199389-22199451,22199604-22199924,22200178-22200423,
22202152-22203337,22203487-22203551,22204205-22204486,
22205005-22205106,22205587-22206105
Length = 927
Score = 34.3 bits (75), Expect = 0.19
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +1
Query: 241 LPSASRAARGGLAVDXXSIPHRPPFIAHISNLPYXVEXSAIAXLFADL-KVTNLSLPXXG 417
L + ++AA G V+ P F ++ NLP+ V+ S + LF++ KV + +
Sbjct: 213 LLTVNKAAPRGARVERPPRQFGPSFRIYVGNLPWQVDDSRLVQLFSEHGKVVDARVVYDR 272
Query: 418 D--RLKGHGYVDFEXRENLIEAL 480
+ R +G G+V +E L +A+
Sbjct: 273 ETGRSRGFGFVTMATQEELDDAI 295
>07_03_0252 - 15846143-15848473
Length = 776
Score = 32.7 bits (71), Expect = 0.58
Identities = 28/94 (29%), Positives = 37/94 (39%), Gaps = 4/94 (4%)
Frame = +1
Query: 235 VVLPSASRAARGGLAVDXXSIPHR-PPFIAHISNLPYXVEXSAIAXLFADLKVTNLSLPX 411
+VLPS A GG PP A +N I +F DL + P
Sbjct: 556 IVLPSEQAGAGGGAETTEALFDQPVPPLAADCANQG---SYGVIDPVFRDLADLIVLPPE 612
Query: 412 XGDRLKGHG---YVDFEXRENLIEALNMPDLTIG 504
D + G + DF+ EN+ EAL+ D T G
Sbjct: 613 QADAMDGEAAPAWCDFDFPENIDEALSYVDFTAG 646
>05_03_0025 + 7462272-7462412,7462865-7463032
Length = 102
Score = 32.3 bits (70), Expect = 0.77
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 322 HISNLPYXVEXSAIAXLFADLKVTNLSLPXXG--DRLKGHGYVDFEXRENLIEAL-NMPD 492
++ NLP+ ++ FA+ + + R +G G+V+FE E++ A+ M
Sbjct: 21 YVGNLPFSANDRSLKDSFANYGAISAEIAWDSVMGRSRGFGFVNFEDSESVNAAIQGMNG 80
Query: 493 LTIGGRRVRI 522
IGGR V +
Sbjct: 81 QDIGGRNVTV 90
>01_05_0696 - 24366857-24368200
Length = 447
Score = 30.7 bits (66), Expect = 2.3
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 358 AIAXLFADLKVTNLSLPXXGDRLKGHGYVDFEXRENLIEALNMPDLTIGGR 510
AI F DL+ + R KG+G+V F ++ + AL P I GR
Sbjct: 94 AIFSAFGDLEEAVVITDKSTGRSKGYGFVTFRHADSAVLALKEPSKKIDGR 144
>03_06_0507 +
34404843-34404968,34405091-34405151,34405260-34405296,
34405365-34405386,34405861-34405957,34406037-34406180,
34407034-34407173,34408205-34408255,34408347-34408429,
34408515-34408590,34408646-34408760,34409080-34409575,
34409682-34409895,34410000-34410070,34410527-34410695,
34410787-34410916,34411330-34411742,34411839-34412039
Length = 881
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/78 (21%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +1
Query: 310 PFIAHISNLPYXVEXSAIAXLFADLKVTN---LSLPXXGDRLKGHGYVDFEXRENLIEAL 480
P +SNLPY + + + +F+++ + P + +G G+V + LI+
Sbjct: 26 PSTVFVSNLPYTFKSADLEAVFSEVGPVRRCFMVAPKGSETSRGFGFVQLIPQLLLIQ-- 83
Query: 481 NMPDLTIGGRRVRIEVST 534
++ GR++R++++T
Sbjct: 84 -KDGFSVAGRKIRVKLAT 100
>02_05_0810 -
31934965-31935013,31935096-31935217,31935328-31935519,
31937689-31937759,31938708-31938819,31938911-31939015
Length = 216
Score = 30.3 bits (65), Expect = 3.1
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +1
Query: 427 KGHGYVDFEXRENLIEALNMPDLTIGGRRVRI 522
KG YV+F +E + EALN+ + + GR++++
Sbjct: 130 KGFAYVEFLEQEAVQEALNLNESELHGRQIKV 161
>08_01_0620 -
5416197-5416225,5416333-5416652,5417144-5417235,
5417304-5417394,5417489-5417577,5417812-5417929,
5418007-5418098,5418180-5418215,5418323-5418403,
5418510-5418617,5418809-5418901,5419045-5419146,
5419345-5419449,5419526-5419612,5419952-5420227
Length = 572
Score = 29.9 bits (64), Expect = 4.1
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +1
Query: 373 FADL-KVTNLSLPXXGDR--LKGHGYVDFEXRENLIEALNMPDLTIGGRRVRIEVSTP 537
FAD ++T +S+P + KG Y+DF+ + + +AL + +GG + ++ + P
Sbjct: 435 FADCGEITRVSVPMDRETGASKGIAYIDFKDQASFSKALELSGSDLGGYNLYVDEAKP 492
>06_01_0824 -
6219477-6219556,6220427-6220808,6221415-6221448,
6222214-6222370,6224449-6224575,6224663-6224914
Length = 343
Score = 28.7 bits (61), Expect = 9.5
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 421 RLKGHGYVDFEXRENLIEALNMPDLTIGGRRVRIEVST 534
R KG+G+V F E A+ P+ I GRR +++
Sbjct: 78 RSKGYGFVTFREAEAARRAVQDPNPMIAGRRANCNIAS 115
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,274,450
Number of Sequences: 37544
Number of extensions: 333606
Number of successful extensions: 892
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3619931772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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