Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_C05
         (1189 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81037-3|CAB02750.1|  205|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z37139-9|CAA85493.1|  396|Caenorhabditis elegans Hypothetical pr...    31   1.6  
Z68213-3|CAA92438.1|  223|Caenorhabditis elegans Hypothetical pr...    31   2.1  
AL117204-22|CAB55151.1|  331|Caenorhabditis elegans Hypothetical...    30   2.8  
AC084197-23|AAM44389.1|  610|Caenorhabditis elegans Hypothetical...    29   8.5  

>Z81037-3|CAB02750.1|  205|Caenorhabditis elegans Hypothetical
           protein C17E4.5 protein.
          Length = 205

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 427 KGHGYVDFEXRENLIEALNMPDLTIGGRRVRIE 525
           KG  YV+F  +E +  AL M D  + GR+++++
Sbjct: 119 KGFAYVEFTEKEGMQNALAMTDSLLRGRQIKVD 151


>Z37139-9|CAA85493.1|  396|Caenorhabditis elegans Hypothetical
           protein C14B1.5 protein.
          Length = 396

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 557 EVDALIEIGTMTLSVQWVTGAPDPALYP 640
           EVD  +++    LS+ W T  P P LYP
Sbjct: 314 EVDCWVQVACPRLSIDWGTQFPKPLLYP 341


>Z68213-3|CAA92438.1|  223|Caenorhabditis elegans Hypothetical
           protein C01F6.5 protein.
          Length = 223

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = +1

Query: 208 GSASHPRAPVVLPSASRAARGGLAVDXXSIP--HRPPFIAHISNLPYXVEXSAIAXLFAD 381
           G+A   R P   P   R   GG+     SIP         ++SNL + V    +  LFA+
Sbjct: 38  GTAGPSRRPTAQP---RRQSGGIRTVDRSIPANENREVRINLSNLAHTVHSGDLRQLFAE 94

Query: 382 LKVTNLSL 405
            K+ N+S+
Sbjct: 95  FKIRNVSV 102


>AL117204-22|CAB55151.1|  331|Caenorhabditis elegans Hypothetical
           protein Y116A8C.34 protein.
          Length = 331

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/56 (23%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +1

Query: 373 FADLKVTNLSLPXXGDRLKGHGYVDFEXRENLIEAL-NMPDLTIGGRRVRIEVSTP 537
           F D+   ++ +     + +G G+V+F+  E+   A+ NM +  + G+ +R+  + P
Sbjct: 34  FGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNMNESELFGKTIRVNFARP 89


>AC084197-23|AAM44389.1|  610|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.33 protein.
          Length = 610

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 18/75 (24%), Positives = 29/75 (38%)
 Frame = +1

Query: 298 PHRPPFIAHISNLPYXVEXSAIAXLFADLKVTNLSLPXXGDRLKGHGYVDFEXRENLIEA 477
           P R  +I  +  LP+      I   FA L +  +       R  G  YV+F+  E   +A
Sbjct: 60  PPRSQYI-RLRGLPFNATEKDIHEFFAGLTIERVKFVCTTGRPNGEAYVEFKNTEEAGKA 118

Query: 478 LNMPDLTIGGRRVRI 522
           +      I  R + +
Sbjct: 119 MENDRKEISNRYIEV 133


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,626,392
Number of Sequences: 27780
Number of extensions: 251390
Number of successful extensions: 545
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3255550896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)