Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_C03
         (1175 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   4.3  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   4.3  
AF515525-1|AAM61892.1|  235|Anopheles gambiae glutathione S-tran...    24   7.5  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.0 bits (52), Expect = 4.3
 Identities = 28/125 (22%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
 Frame = +3

Query: 552 ASNKNVFETTTKDMLAALMEGYNCSVFVYGATGAGKTFTMIGSNEH-PGITYLT-----M 713
           AS + +  T  + +    +E  N   F+YG  G  +   M   +EH P +T  +     +
Sbjct: 516 ASTEQMTVTFNRPLNQWTLEDGNGESFIYGTYGDKQAVKMDSGSEHWPFMTERSELKDRL 575

Query: 714 EHLFYTINQFEKEREFDIGVSYIEVYNENVYDL--LKPSKT-PLQLREDSKY-GVMVAGL 881
             ++Y + QF++  ++ +  +Y +    + Y L  +  S T  LQL   ++Y   ++ G 
Sbjct: 576 PSVWYLVRQFDRADQW-MEYTYTKDPLTDDYQLSAISTSNTASLQLSYSNQYNSTLLTGY 634

Query: 882 TLNNI 896
           T+  +
Sbjct: 635 TIRTL 639


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.0 bits (52), Expect = 4.3
 Identities = 28/125 (22%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
 Frame = +3

Query: 552 ASNKNVFETTTKDMLAALMEGYNCSVFVYGATGAGKTFTMIGSNEH-PGITYLT-----M 713
           AS + +  T  + +    +E  N   F+YG  G  +   M   +EH P +T  +     +
Sbjct: 517 ASTEQMTVTFNRPLNQWTLEDGNGESFIYGTYGDKQAVKMDSGSEHWPFMTERSELKDRL 576

Query: 714 EHLFYTINQFEKEREFDIGVSYIEVYNENVYDL--LKPSKT-PLQLREDSKY-GVMVAGL 881
             ++Y + QF++  ++ +  +Y +    + Y L  +  S T  LQL   ++Y   ++ G 
Sbjct: 577 PSVWYLVRQFDRADQW-MEYTYTKDPLTDDYQLSAISTSNTASLQLSYSNQYNSTLLTGY 635

Query: 882 TLNNI 896
           T+  +
Sbjct: 636 TIRTL 640


>AF515525-1|AAM61892.1|  235|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 235

 Score = 24.2 bits (50), Expect = 7.5
 Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +2

Query: 596 CCSDGRLQLF-SICVWRYWCRE 658
           C  DG  +L  S+ ++RY CRE
Sbjct: 59  CIVDGSFRLAESVAIYRYLCRE 80


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,055,936
Number of Sequences: 2352
Number of extensions: 21503
Number of successful extensions: 41
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 132842775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)