Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_C03
         (1175 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      25   0.98 
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   3.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   3.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   3.9  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    23   6.9  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   6.9  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   9.1  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   9.1  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   9.1  

>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 25.4 bits (53), Expect = 0.98
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 224 NALYNFIMK*DYTSSNPHEYNQPPLK 147
           N +  +I+  +Y+S N  EYN P  K
Sbjct: 195 NNIETYIVNTNYSSKNMREYNDPEYK 220


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +2

Query: 596 CCSDGRLQLFSICVWRYWCRED-IHY 670
           CC+   L L +I + RYW   D I+Y
Sbjct: 119 CCTASILNLCAIALDRYWAITDPINY 144


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +2

Query: 596 CCSDGRLQLFSICVWRYWCRED-IHY 670
           CC+   L L +I + RYW   D I+Y
Sbjct: 119 CCTASILNLCAIALDRYWAITDPINY 144


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +2

Query: 596 CCSDGRLQLFSICVWRYWCRED-IHY 670
           CC+   L L +I + RYW   D I+Y
Sbjct: 119 CCTASILNLCAIALDRYWAITDPINY 144


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 236 HHNSNALYNFIMK*DYTSSN 177
           H+N+N  YN+  K +Y ++N
Sbjct: 91  HNNNNYKYNYNNKYNYNNNN 110


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 159 LIVLVWIARSVISF 200
           LI +VWI  S ISF
Sbjct: 166 LIAIVWICSSAISF 179


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 224 NALYNFIMK*DYTSSNPHEYNQPPLK 147
           N +  +I+  +Y+S    EYN P  K
Sbjct: 195 NNIETYIVNTNYSSKYMREYNDPEYK 220


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 14/57 (24%), Positives = 24/57 (42%)
 Frame = +3

Query: 744 EKEREFDIGVSYIEVYNENVYDLLKPSKTPLQLREDSKYGVMVAGLTLNNIKTAREL 914
           EKE E D  +   E  N++  DLL       Q+  D+   ++ A    N    + ++
Sbjct: 518 EKENEIDFKIEVTEDCNKSFNDLLTQVAELDQIYADTHAKLVQAAFEQNTTDQSMDI 574


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 7/38 (18%), Positives = 20/38 (52%)
 Frame = +1

Query: 883 H*TILKQLGNSLTCLKMETRTGPSILQMQTLXVXEVML 996
           H  ++++LG  + C+K+    G ++ ++    + +  L
Sbjct: 272 HGIVIEELGGEIQCVKISALKGINLRELTEAIIVQAEL 309


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 283,554
Number of Sequences: 438
Number of extensions: 5921
Number of successful extensions: 22
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 40006332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)