Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_B24
(1121 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI000066070E Cluster: Homolog of Homo sapiens "H2A his... 134 3e-30
UniRef50_UPI000065E2E3 Cluster: Homolog of Homo sapiens "Histone... 134 3e-30
UniRef50_Q4SKJ3 Cluster: Histone H4; n=3; Euteleostomi|Rep: Hist... 134 3e-30
UniRef50_A7SHX4 Cluster: Predicted protein; n=9; Nematostella ve... 134 3e-30
UniRef50_P62805 Cluster: Histone H4; n=364; root|Rep: Histone H4... 134 3e-30
UniRef50_Q01FF9 Cluster: Histone H4; n=1; Ostreococcus tauri|Rep... 133 7e-30
UniRef50_A3BZ47 Cluster: Histone H4; n=2; Eukaryota|Rep: Histone... 133 9e-30
UniRef50_P80739 Cluster: Histone H4; n=143; root|Rep: Histone H4... 122 2e-26
UniRef50_UPI0000660B5F Cluster: H4 histone family, member L; n=1... 117 5e-25
UniRef50_A4QW60 Cluster: Histone H4; n=1; Magnaporthe grisea|Rep... 91 6e-17
UniRef50_Q4QFI3 Cluster: Histone h4; n=19; Leishmania|Rep: Histo... 90 1e-16
UniRef50_A4HNK8 Cluster: Histone h4; n=1; Leishmania braziliensi... 88 4e-16
UniRef50_A0BJB4 Cluster: Histone H4; n=2; Paramecium tetraurelia... 85 2e-15
UniRef50_A6S8Z2 Cluster: Histone H4; n=1; Botryotinia fuckeliana... 84 7e-15
UniRef50_Q6A1P4 Cluster: Histone H4; n=1; Euplotes vannus|Rep: H... 83 2e-14
UniRef50_Q8TA36 Cluster: Histone H4; n=1; Heterodera glycines|Re... 81 4e-14
UniRef50_Q7RX38 Cluster: Histone H4; n=3; Sordariomycetes|Rep: H... 80 9e-14
UniRef50_Q0D5M3 Cluster: Os07g0549900 protein; n=1; Oryza sativa... 77 6e-13
UniRef50_Q4RFZ6 Cluster: Chromosome undetermined SCAF15108, whol... 74 6e-12
UniRef50_A2Q2T8 Cluster: Histone H4; Histone-fold; n=1; Medicago... 73 2e-11
UniRef50_UPI0000E47984 Cluster: PREDICTED: similar to RNA bindin... 72 2e-11
UniRef50_Q0UHL1 Cluster: Histone H4; n=1; Phaeosphaeria nodorum|... 70 1e-10
UniRef50_Q8SQP4 Cluster: Histone H4; n=1; Encephalitozoon cunicu... 70 1e-10
UniRef50_A0CDN4 Cluster: Histone H4; n=2; Paramecium tetraurelia... 69 2e-10
UniRef50_A4HHY8 Cluster: Histone h4; n=1; Leishmania braziliensi... 68 4e-10
UniRef50_Q0J1K7 Cluster: Os09g0433500 protein; n=10; Eukaryota|R... 68 5e-10
UniRef50_A4HBJ5 Cluster: Histone H4; n=1; Leishmania braziliensi... 62 3e-08
UniRef50_A4VCP0 Cluster: Putative uncharacterized protein; n=1; ... 61 4e-08
UniRef50_Q3LW75 Cluster: Histone H4; n=1; Bigelowiella natans|Re... 54 9e-06
UniRef50_Q5BH63 Cluster: Survival factor 1; n=18; Pezizomycotina... 50 8e-05
UniRef50_A2RAE9 Cluster: Histone H4; n=1; Aspergillus niger|Rep:... 49 2e-04
UniRef50_Q9HGK9 Cluster: Histone H4 variant; n=2; Schizosaccharo... 49 3e-04
UniRef50_Q00YR9 Cluster: Chromosome 11 contig 1, DNA sequence; n... 48 3e-04
UniRef50_A6QZ47 Cluster: Predicted protein; n=1; Ajellomyces cap... 47 0.001
UniRef50_Q0V9Y3 Cluster: Putative uncharacterized protein MGC145... 46 0.001
UniRef50_Q8JKV9 Cluster: Histone h3, h4; n=2; root|Rep: Histone ... 46 0.001
UniRef50_Q1DKH6 Cluster: Predicted protein; n=1; Coccidioides im... 44 0.009
UniRef50_UPI00005480BE Cluster: PREDICTED: hypothetical protein;... 41 0.051
UniRef50_A7DPB5 Cluster: Transcription factor CBF/NF-Y/archaeal ... 39 0.27
UniRef50_Q4JH29 Cluster: Histone; n=1; Cenarchaeum symbiosum|Rep... 38 0.47
UniRef50_A1RX27 Cluster: Transcription factor CBF/NF-Y histone; ... 38 0.62
UniRef50_A7F6E9 Cluster: Putative uncharacterized protein; n=1; ... 37 0.82
UniRef50_Q6CGH9 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 37 1.1
UniRef50_Q2H4H2 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_A6SS64 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_P48782 Cluster: Archaeal histone A1; n=21; Euryarchaeot... 36 1.4
UniRef50_Q0W3U2 Cluster: Putative archaeal histone A1; n=1; uncu... 36 2.5
UniRef50_Q9FMG4 Cluster: Similarity to splicing factor; n=6; Mag... 35 3.3
UniRef50_A6QUY0 Cluster: Predicted protein; n=1; Ajellomyces cap... 35 3.3
UniRef50_P04554 Cluster: Protamine-2 (Sperm protamine-P2) (Sperm... 35 4.4
UniRef50_A0JTV0 Cluster: Aldehyde dehydrogenase; n=4; Actinobact... 34 5.8
UniRef50_Q7RNR7 Cluster: RNA recognition motif, putative; n=6; P... 34 5.8
UniRef50_Q0UBC0 Cluster: Putative uncharacterized protein; n=1; ... 34 5.8
UniRef50_Q5QRW6 Cluster: NADH-ubiquinone oxidoreductase chain 4;... 34 7.7
UniRef50_Q4Q9T7 Cluster: Putative uncharacterized protein; n=3; ... 34 7.7
UniRef50_Q58655 Cluster: Probable archaeal histone 3; n=2; Archa... 34 7.7
>UniRef50_UPI000066070E Cluster: Homolog of Homo sapiens "H2A
histone family, member X (H2AFX), mRNA; n=2; Takifugu
rubripes|Rep: Homolog of Homo sapiens "H2A histone
family, member X (H2AFX), mRNA - Takifugu rubripes
Length = 325
Score = 134 bits (325), Expect = 3e-30
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 89
Query: 393 ALKRQG 410
ALKRQG
Sbjct: 90 ALKRQG 95
>UniRef50_UPI000065E2E3 Cluster: Homolog of Homo sapiens "Histone 1,
H2ai; n=2; Takifugu rubripes|Rep: Homolog of Homo
sapiens "Histone 1, H2ai - Takifugu rubripes
Length = 370
Score = 134 bits (325), Expect = 3e-30
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 89
Query: 393 ALKRQG 410
ALKRQG
Sbjct: 90 ALKRQG 95
>UniRef50_Q4SKJ3 Cluster: Histone H4; n=3; Euteleostomi|Rep: Histone
H4 - Tetraodon nigroviridis (Green puffer)
Length = 234
Score = 134 bits (325), Expect = 3e-30
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY
Sbjct: 161 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 220
Query: 393 ALKRQG 410
ALKRQG
Sbjct: 221 ALKRQG 226
>UniRef50_A7SHX4 Cluster: Predicted protein; n=9; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 222
Score = 134 bits (325), Expect = 3e-30
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 89
Query: 393 ALKRQG 410
ALKRQG
Sbjct: 90 ALKRQG 95
>UniRef50_P62805 Cluster: Histone H4; n=364; root|Rep: Histone H4 -
Homo sapiens (Human)
Length = 103
Score = 134 bits (325), Expect = 3e-30
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 89
Query: 393 ALKRQG 410
ALKRQG
Sbjct: 90 ALKRQG 95
>UniRef50_Q01FF9 Cluster: Histone H4; n=1; Ostreococcus tauri|Rep:
Histone H4 - Ostreococcus tauri
Length = 282
Score = 133 bits (322), Expect = 7e-30
Identities = 65/66 (98%), Positives = 66/66 (100%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHA+RKTVTAMDVVY
Sbjct: 179 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHARRKTVTAMDVVY 238
Query: 393 ALKRQG 410
ALKRQG
Sbjct: 239 ALKRQG 244
Score = 71.7 bits (168), Expect = 3e-11
Identities = 34/69 (49%), Positives = 44/69 (63%)
Frame = -1
Query: 419 QGATLAFQSVHNIHSGDGLPLGVFGVCDSVADHVFEEHFENAAGLFVYKTGDTFHSTSAS 240
+GA LA + V +IH GD L V GV + D V EEH E+A+GLFV +T D +T+AS
Sbjct: 23 EGAALALERVDDIHGGDRLSASVLGVGHGITDDVLEEHLEDASGLFVDETRDALDTTTAS 82
Query: 239 QTTDSRFRD 213
Q +D R RD
Sbjct: 83 QASDRRLRD 91
>UniRef50_A3BZ47 Cluster: Histone H4; n=2; Eukaryota|Rep: Histone H4
- Oryza sativa subsp. japonica (Rice)
Length = 285
Score = 133 bits (321), Expect = 9e-30
Identities = 64/66 (96%), Positives = 66/66 (100%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
ITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVY
Sbjct: 212 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 271
Query: 393 ALKRQG 410
ALKRQG
Sbjct: 272 ALKRQG 277
>UniRef50_P80739 Cluster: Histone H4; n=143; root|Rep: Histone H4 -
Euplotes crassus
Length = 107
Score = 122 bits (293), Expect = 2e-26
Identities = 58/66 (87%), Positives = 63/66 (95%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
+TKPAIRRLARRGGVKRIS L+YEETR VLK FLE+VIRD+VTYTEHAKRKTVTA+DVVY
Sbjct: 34 VTKPAIRRLARRGGVKRISSLVYEETRAVLKGFLESVIRDSVTYTEHAKRKTVTALDVVY 93
Query: 393 ALKRQG 410
ALKRQG
Sbjct: 94 ALKRQG 99
>UniRef50_UPI0000660B5F Cluster: H4 histone family, member L; n=1;
Takifugu rubripes|Rep: H4 histone family, member L -
Takifugu rubripes
Length = 220
Score = 117 bits (282), Expect = 5e-25
Identities = 57/57 (100%), Positives = 57/57 (100%)
Frame = +3
Query: 240 ARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQG 410
ARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQG
Sbjct: 156 ARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQG 212
>UniRef50_A4QW60 Cluster: Histone H4; n=1; Magnaporthe grisea|Rep:
Histone H4 - Magnaporthe grisea (Rice blast fungus)
(Pyricularia grisea)
Length = 144
Score = 90.6 bits (215), Expect = 6e-17
Identities = 42/70 (60%), Positives = 54/70 (77%)
Frame = +3
Query: 201 TSRXITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAM 380
T ITK IRRLARRGGVKR+SG+IY+ETRG +K +LE ++RD V Y ++ + KTVT
Sbjct: 54 TISGITKGDIRRLARRGGVKRLSGMIYDETRGAMKQYLERILRDCVAYCDYRRAKTVTVH 113
Query: 381 DVVYALKRQG 410
DV++ALKR G
Sbjct: 114 DVLHALKRIG 123
>UniRef50_Q4QFI3 Cluster: Histone h4; n=19; Leishmania|Rep: Histone
h4 - Leishmania major
Length = 100
Score = 89.8 bits (213), Expect = 1e-16
Identities = 40/68 (58%), Positives = 56/68 (82%)
Frame = +3
Query: 207 RXITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDV 386
R IT+ ++RR+ARRGGVKRIS +YEE R VLK ++E+++R + YTE+A++KTVTA DV
Sbjct: 26 RGITRGSVRRMARRGGVKRISSEVYEEVRRVLKAYVEDIVRCSTAYTEYARKKTVTACDV 85
Query: 387 VYALKRQG 410
V AL++QG
Sbjct: 86 VNALRKQG 93
>UniRef50_A4HNK8 Cluster: Histone h4; n=1; Leishmania
braziliensis|Rep: Histone h4 - Leishmania braziliensis
Length = 145
Score = 87.8 bits (208), Expect = 4e-16
Identities = 39/66 (59%), Positives = 55/66 (83%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
IT+ +RR+ARRGGVKRISG +YEE R VLK ++E+++R + YTE+A++KTVTA DVV
Sbjct: 73 ITRGCVRRMARRGGVKRISGDLYEEVRRVLKAYVEDIVRCSTAYTEYARKKTVTAADVVN 132
Query: 393 ALKRQG 410
AL+++G
Sbjct: 133 ALRKRG 138
>UniRef50_A0BJB4 Cluster: Histone H4; n=2; Paramecium
tetraurelia|Rep: Histone H4 - Paramecium tetraurelia
Length = 107
Score = 85.4 bits (202), Expect = 2e-15
Identities = 42/66 (63%), Positives = 50/66 (75%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
IT IRRLARRGGVKRIS Y TR V+ FL ++++DA+ YTEHA+R TV AMDVVY
Sbjct: 34 ITNGDIRRLARRGGVKRISSDSYPTTRDVIVNFLSSLVKDAIIYTEHAQRNTVQAMDVVY 93
Query: 393 ALKRQG 410
ALK+ G
Sbjct: 94 ALKKYG 99
>UniRef50_A6S8Z2 Cluster: Histone H4; n=1; Botryotinia fuckeliana
B05.10|Rep: Histone H4 - Botryotinia fuckeliana B05.10
Length = 138
Score = 83.8 bits (198), Expect = 7e-15
Identities = 40/66 (60%), Positives = 50/66 (75%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
ITK IRRLARRGGVKRIS +IY + R +K L +V++D V EH+KRKTVT DV++
Sbjct: 62 ITKGDIRRLARRGGVKRISSMIYGDVREAIKSRLNDVLKDCVALVEHSKRKTVTVNDVIW 121
Query: 393 ALKRQG 410
AL+RQG
Sbjct: 122 ALRRQG 127
>UniRef50_Q6A1P4 Cluster: Histone H4; n=1; Euplotes vannus|Rep:
Histone H4 - Euplotes vannus
Length = 125
Score = 82.6 bits (195), Expect = 2e-14
Identities = 38/66 (57%), Positives = 51/66 (77%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
I+ A++RLARRGG+KRIS +YEE R + VFLE ++ D+ +Y + AKRKT+ +DVVY
Sbjct: 34 ISDGAMKRLARRGGIKRISADVYEELRKIYIVFLEKLVEDSYSYADCAKRKTIIPLDVVY 93
Query: 393 ALKRQG 410
ALKRQG
Sbjct: 94 ALKRQG 99
>UniRef50_Q8TA36 Cluster: Histone H4; n=1; Heterodera glycines|Rep:
Histone H4 - Heterodera glycines (Soybean cyst nematode
worm)
Length = 170
Score = 81.4 bits (192), Expect = 4e-14
Identities = 36/70 (51%), Positives = 52/70 (74%)
Frame = +3
Query: 201 TSRXITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAM 380
+++ ITK +I RLARR GV RI+ +Y+E R L+ +LE +IRDA Y +H +RKT+ +
Sbjct: 24 SAKKITKASILRLARRAGVARINARVYDEVRAALRSYLETIIRDAAIYCQHERRKTMKSR 83
Query: 381 DVVYALKRQG 410
DVV+AL+RQG
Sbjct: 84 DVVHALRRQG 93
>UniRef50_Q7RX38 Cluster: Histone H4; n=3; Sordariomycetes|Rep:
Histone H4 - Neurospora crassa
Length = 155
Score = 80.2 bits (189), Expect = 9e-14
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = +3
Query: 207 RXITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDV 386
R I K IR + RRGGVKRIS IY+E R LK L+ ++RD VTYTEH KTVT DV
Sbjct: 45 RKIIKDTIRGITRRGGVKRISAGIYDEIRAALKERLQMILRDCVTYTEHRHAKTVTVTDV 104
Query: 387 VYALKRQG 410
++AL+R G
Sbjct: 105 IFALRRIG 112
>UniRef50_Q0D5M3 Cluster: Os07g0549900 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os07g0549900 protein -
Oryza sativa subsp. japonica (Rice)
Length = 253
Score = 77.4 bits (182), Expect = 6e-13
Identities = 32/70 (45%), Positives = 46/70 (65%)
Frame = +2
Query: 209 GHHETGYPSFGSQRWSETYLRSYIRRDPRRSQSVPRKRDPRRCHIHRTRQEEDRHRYGCC 388
G HE G P G + E +L +++R DPR +Q +PR+R PRR H+HR R +DRHR+G
Sbjct: 158 GDHEAGDPEAGEEGRGEAHLGAHLRGDPRGAQDLPRERHPRRRHLHRARPPQDRHRHGRR 217
Query: 389 VRSETPRSHP 418
+R++ P HP
Sbjct: 218 LRAQAPGPHP 227
>UniRef50_Q4RFZ6 Cluster: Chromosome undetermined SCAF15108, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF15108,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 149
Score = 74.1 bits (174), Expect = 6e-12
Identities = 35/70 (50%), Positives = 44/70 (62%)
Frame = +2
Query: 209 GHHETGYPSFGSQRWSETYLRSYIRRDPRRSQSVPRKRDPRRCHIHRTRQEEDRHRYGCC 388
GHH+T +P GS R E +LR +R DPR ++ VP +RDPRR H+H RQEED +G
Sbjct: 29 GHHQTRHPPPGSARRREAHLRPDLRGDPRGAEGVPGERDPRRRHLHGARQEEDGDGHGRG 88
Query: 389 VRSETPRSHP 418
VR E HP
Sbjct: 89 VRPEEAGPHP 98
>UniRef50_A2Q2T8 Cluster: Histone H4; Histone-fold; n=1; Medicago
truncatula|Rep: Histone H4; Histone-fold - Medicago
truncatula (Barrel medic)
Length = 289
Score = 72.5 bits (170), Expect = 2e-11
Identities = 35/48 (72%), Positives = 39/48 (81%)
Frame = +3
Query: 249 GGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
G K LIYEE RGVLK+FL+N I DAVTYTEHA+RKT+TAMDVVY
Sbjct: 15 GREKETLVLIYEEIRGVLKIFLQNEICDAVTYTEHARRKTLTAMDVVY 62
>UniRef50_UPI0000E47984 Cluster: PREDICTED: similar to RNA binding
motif, single stranded interacting protein; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
RNA binding motif, single stranded interacting protein -
Strongylocentrotus purpuratus
Length = 329
Score = 72.1 bits (169), Expect = 2e-11
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 261 RISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKT 368
RISGLIYEETRGVLKVFLENVIRDAVTY EHAK+KT
Sbjct: 118 RISGLIYEETRGVLKVFLENVIRDAVTYCEHAKQKT 153
>UniRef50_Q0UHL1 Cluster: Histone H4; n=1; Phaeosphaeria
nodorum|Rep: Histone H4 - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 238
Score = 70.1 bits (164), Expect = 1e-10
Identities = 31/66 (46%), Positives = 46/66 (69%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
+TK IRRLARRGGVKRI+ IY++ R L L ++++DA+ E + RKT++ D+++
Sbjct: 159 VTKGDIRRLARRGGVKRIAATIYDDIRQALNDRLRSILKDAIAVVECSGRKTISVTDIIF 218
Query: 393 ALKRQG 410
L RQG
Sbjct: 219 VLNRQG 224
>UniRef50_Q8SQP4 Cluster: Histone H4; n=1; Encephalitozoon
cuniculi|Rep: Histone H4 - Encephalitozoon cuniculi
Length = 103
Score = 70.1 bits (164), Expect = 1e-10
Identities = 30/69 (43%), Positives = 46/69 (66%)
Frame = +3
Query: 204 SRXITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMD 383
S I+KPAIRR+ARR GV+R+ G ++E + ++ + + A Y HAKRKT+T D
Sbjct: 29 SDSISKPAIRRIARRAGVRRVGGGCFKEINNAAREYIRDTLSIACIYATHAKRKTITCSD 88
Query: 384 VVYALKRQG 410
++++LKR G
Sbjct: 89 ILHSLKRMG 97
>UniRef50_A0CDN4 Cluster: Histone H4; n=2; Paramecium
tetraurelia|Rep: Histone H4 - Paramecium tetraurelia
Length = 116
Score = 68.9 bits (161), Expect = 2e-10
Identities = 32/69 (46%), Positives = 48/69 (69%)
Frame = +3
Query: 204 SRXITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMD 383
SR I+ IRRLARRGGVKRIS +YE ++ +K+++ N++RD++ Y ++ R T+ A D
Sbjct: 40 SRLISNGDIRRLARRGGVKRISSDVYELSKLYMKLYISNILRDSMIYANYSGRATILADD 99
Query: 384 VVYALKRQG 410
+ A KR G
Sbjct: 100 ICRAAKRAG 108
>UniRef50_A4HHY8 Cluster: Histone h4; n=1; Leishmania
braziliensis|Rep: Histone h4 - Leishmania braziliensis
Length = 131
Score = 68.1 bits (159), Expect = 4e-10
Identities = 33/57 (57%), Positives = 44/57 (77%)
Frame = +3
Query: 228 IRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYAL 398
IRR+AR GVKRISG +YEE R VLK ++E+++R + E+A++KTVTA DVV AL
Sbjct: 34 IRRMARCDGVKRISGDLYEEVRRVLKAYVEDIVRCSAACIEYARKKTVTASDVVNAL 90
>UniRef50_Q0J1K7 Cluster: Os09g0433500 protein; n=10; Eukaryota|Rep:
Os09g0433500 protein - Oryza sativa subsp. japonica
(Rice)
Length = 781
Score = 67.7 bits (158), Expect = 5e-10
Identities = 33/69 (47%), Positives = 39/69 (56%)
Frame = -1
Query: 419 QGATLAFQSVHNIHSGDGLPLGVFGVCDSVADHVFEEHFENAAGLFVYKTGDTFHSTSAS 240
+GA LA + V ++H GDGL GV GV D VAD V EE E+ AGL V + D H
Sbjct: 333 EGAALALEGVDDVHGGDGLAAGVLGVGDGVADDVLEEDLEHPAGLLVDEPRDALHPAPPR 392
Query: 239 QTTDSRFRD 213
Q D R RD
Sbjct: 393 QPPDRRLRD 401
>UniRef50_A4HBJ5 Cluster: Histone H4; n=1; Leishmania
braziliensis|Rep: Histone H4 - Leishmania braziliensis
Length = 106
Score = 61.7 bits (143), Expect = 3e-08
Identities = 26/44 (59%), Positives = 37/44 (84%)
Frame = +3
Query: 237 LARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKT 368
+ARRGGVKRISG +YEE R VLK ++E+++R + YTE+A++KT
Sbjct: 1 MARRGGVKRISGDLYEEVRRVLKAYVEDIVRCSTAYTEYARKKT 44
>UniRef50_A4VCP0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 193
Score = 61.3 bits (142), Expect = 4e-08
Identities = 25/65 (38%), Positives = 46/65 (70%)
Frame = -1
Query: 419 QGATLAFQSVHNIHSGDGLPLGVFGVCDSVADHVFEEHFENAAGLFVYKTGDTFHSTSAS 240
+ + L+ + V N+HS DG VF V DSV+++VF+E ++ +G+ V + G++ ++TS+S
Sbjct: 54 ESSALSLEGVDNVHSSDGFSSSVFSVSDSVSNNVFQERLQDLSGVVVNERGNSLNTTSSS 113
Query: 239 QTTDS 225
Q++DS
Sbjct: 114 QSSDS 118
>UniRef50_Q3LW75 Cluster: Histone H4; n=1; Bigelowiella natans|Rep:
Histone H4 - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 95
Score = 53.6 bits (123), Expect = 9e-06
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +3
Query: 198 ITSRX-ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVT 374
ITS+ I+K +I+RLAR+ G+KR+S IY E + FL +++D + + + R +
Sbjct: 17 ITSKSYISKLSIKRLARKSGIKRMSCTIYAEINKFIVEFLTKIVKDIIIFCRYENRTLIK 76
Query: 375 AMDVVYALKRQG 410
DV+ L+R G
Sbjct: 77 VSDVLVVLRRYG 88
>UniRef50_Q5BH63 Cluster: Survival factor 1; n=18;
Pezizomycotina|Rep: Survival factor 1 - Emericella
nidulans (Aspergillus nidulans)
Length = 546
Score = 50.4 bits (115), Expect = 8e-05
Identities = 32/58 (55%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +3
Query: 234 RLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYT-EHAKRKTVTAMDVVYALKR 404
RLARRGGV RI IY+E R VLK L V + T ++RK VT DVVYALKR
Sbjct: 481 RLARRGGVYRIKNEIYDEIRIVLKERLAEVCLVMESGTIPSSERKLVTTRDVVYALKR 538
>UniRef50_A2RAE9 Cluster: Histone H4; n=1; Aspergillus niger|Rep:
Histone H4 - Aspergillus niger
Length = 97
Score = 49.2 bits (112), Expect = 2e-04
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHA-----KRKTVTA 377
IT+P+IRRLARRGGV RIS +Y E R +K L +IR + E + +RK V
Sbjct: 31 ITRPSIRRLARRGGVIRISADVYPEVRKTVKNRLTEIIRQIILVMESSTTPGHERKLVRT 90
Query: 378 MDV 386
D+
Sbjct: 91 QDI 93
>UniRef50_Q9HGK9 Cluster: Histone H4 variant; n=2;
Schizosaccharomyces pombe|Rep: Histone H4 variant -
Schizosaccharomyces pombe (Fission yeast)
Length = 479
Score = 48.8 bits (111), Expect = 3e-04
Identities = 22/60 (36%), Positives = 34/60 (56%)
Frame = +3
Query: 228 IRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQ 407
IR+LA K+I+G + EE ++F + + D + +HA RKT+ DVV +KRQ
Sbjct: 391 IRKLANSYSQKKIAGSVIEELTTASELFFKQIANDLSAFADHAHRKTIDTQDVVLLMKRQ 450
>UniRef50_Q00YR9 Cluster: Chromosome 11 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 11 contig 1, DNA
sequence - Ostreococcus tauri
Length = 180
Score = 48.4 bits (110), Expect = 3e-04
Identities = 33/68 (48%), Positives = 39/68 (57%)
Frame = +1
Query: 214 SRNRLSVVWLAEVE*NVSPVLYTKRPAAFSKCSSKT*SATLSHTPNTPRGRPSPLWMLCT 393
SR+R S WLA V + SPV TKRP A S+CSS+T TL+ R SP WM T
Sbjct: 48 SRSRRSDAWLAVVVSSASPVSSTKRPEASSRCSSRT---TLAE-------RRSPPWMSST 97
Query: 394 L*NAKVAP 417
+AK AP
Sbjct: 98 RSSAKAAP 105
>UniRef50_A6QZ47 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 112
Score = 46.8 bits (106), Expect = 0.001
Identities = 32/64 (50%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Frame = +3
Query: 213 ITKPA-IRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAK-----RKTVT 374
I KP IRRLARRGGV RI IY+ R V+ L +IR V E +K RKTVT
Sbjct: 34 IAKPTTIRRLARRGGVIRIQKDIYDTVRSVVLERLREIIRRLVNLLEGSKYPNRERKTVT 93
Query: 375 AMDV 386
DV
Sbjct: 94 TRDV 97
>UniRef50_Q0V9Y3 Cluster: Putative uncharacterized protein
MGC145722; n=1; Xenopus tropicalis|Rep: Putative
uncharacterized protein MGC145722 - Xenopus tropicalis
(Western clawed frog) (Silurana tropicalis)
Length = 777
Score = 46.4 bits (105), Expect = 0.001
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +3
Query: 228 IRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQ 407
I++L ++S Y+E LKV+ E + D Y HA RKT+T D+ ++RQ
Sbjct: 677 IKQLVNHSTQMKVSKDSYKEVETCLKVYFEQLCGDLTAYAMHANRKTITCSDIELLMRRQ 736
Query: 408 G 410
G
Sbjct: 737 G 737
>UniRef50_Q8JKV9 Cluster: Histone h3, h4; n=2; root|Rep: Histone h3,
h4 - Heliothis zea virus 1
Length = 1111
Score = 46.4 bits (105), Expect = 0.001
Identities = 26/66 (39%), Positives = 34/66 (51%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
I K IRR A R G+ RIS +Y E +++ F++ V R E KRKTV D+
Sbjct: 914 INKNIIRRFAERLGIDRISKDVYPELSRIIEFFMKEVKRRVTLLVECGKRKTVEIRDIKS 973
Query: 393 ALKRQG 410
LK G
Sbjct: 974 ILKSVG 979
>UniRef50_Q1DKH6 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 131
Score = 43.6 bits (98), Expect = 0.009
Identities = 28/59 (47%), Positives = 32/59 (54%)
Frame = +3
Query: 234 RLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQG 410
RLARRGGVKRI IY+ R VL L +IR V E + T VVY L+R G
Sbjct: 61 RLARRGGVKRIQKSIYDTAREVLLDRLRMIIRQIVEVLESGGSSSKT-RKVVYVLQRIG 118
>UniRef50_UPI00005480BE Cluster: PREDICTED: hypothetical protein; n=3;
Danio rerio|Rep: PREDICTED: hypothetical protein - Danio
rerio
Length = 914
Score = 41.1 bits (92), Expect = 0.051
Identities = 29/121 (23%), Positives = 54/121 (44%)
Frame = +3
Query: 48 PSFVAQRVKVCCSSSSKTQTEXVRQVXPVAVKEAKVLERGALNVTGRCCVITSRXITKPA 227
P+FV Q+ +V S S++T +++V A + TG + + K
Sbjct: 761 PAFVKQK-RVFASPSAQTTLTVLKEVNAGAGPQVSRRAPRQKRQTG------TDVLPKSY 813
Query: 228 IRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQ 407
+ + + +++ +Y +LK + + + D TY HAKRKT+ D ++RQ
Sbjct: 814 VMSIFKHFAKTKVASDVYPVINEILKKYFDRLADDLETYATHAKRKTIEVEDFELLMRRQ 873
Query: 408 G 410
G
Sbjct: 874 G 874
>UniRef50_A7DPB5 Cluster: Transcription factor CBF/NF-Y/archaeal
histone; n=1; Candidatus Nitrosopumilus maritimus
SCM1|Rep: Transcription factor CBF/NF-Y/archaeal histone
- Candidatus Nitrosopumilus maritimus SCM1
Length = 78
Score = 38.7 bits (86), Expect = 0.27
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +3
Query: 225 AIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALK 401
A+ R+ ++ G +R+S +E R V++ + + AV HA RKTV DV A K
Sbjct: 15 AMYRILKKAGAERVSDESADELRRVIEEVANGIAKSAVDMASHAGRKTVKGEDVKLASK 73
>UniRef50_Q4JH29 Cluster: Histone; n=1; Cenarchaeum symbiosum|Rep:
Histone - Cenarchaeum symbiosum
Length = 75
Score = 37.9 bits (84), Expect = 0.47
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = +3
Query: 225 AIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKR 404
A+ R+ ++ G +R+S +E R ++ ++ R+AV + HA R+TV A DV A ++
Sbjct: 12 AMYRILKKSGAQRVSDESADELRRTIEEIALSIARNAVDMSSHAGRRTVKAEDVRLASRQ 71
>UniRef50_A1RX27 Cluster: Transcription factor CBF/NF-Y histone;
n=1; Thermofilum pendens Hrk 5|Rep: Transcription factor
CBF/NF-Y histone - Thermofilum pendens (strain Hrk 5)
Length = 86
Score = 37.5 bits (83), Expect = 0.62
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +3
Query: 228 IRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKR 404
+RR+ R G +RIS R L+ + +A+ + HA R+TVT DV +A+ R
Sbjct: 18 LRRIFRSQGAERISDDAVVFLREYLEKLAREIALEAIEASRHANRRTVTDEDVKFAISR 76
>UniRef50_A7F6E9 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 411
Score = 37.1 bits (82), Expect = 0.82
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVK--RISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDV 386
+ K AI L R GG K ++S + + F E + D TY+EHA RKT+ DV
Sbjct: 341 VKKNAIS-LGRNGGGKGDKLSRDALDAIMQATEWFFEQISDDLSTYSEHAGRKTIDESDV 399
Query: 387 VYALKR 404
+ +KR
Sbjct: 400 LMLMKR 405
>UniRef50_Q6CGH9 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 456
Score = 36.7 bits (81), Expect = 1.1
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
+ +P ++ L + + EE ++F + D YT+H KRKTV DV
Sbjct: 329 LPRPFLKSLVASITGDNVDKSVIEELVTSSEMFFDQAADDLAAYTDHCKRKTVEPKDVTQ 388
Query: 393 ALKRQ 407
++RQ
Sbjct: 389 LMRRQ 393
>UniRef50_Q2H4H2 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 504
Score = 36.3 bits (80), Expect = 1.4
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVK-RISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVV 389
+ K + A+ GG+K +I+ + F E + D Y +HA RKT+ DV+
Sbjct: 391 VVKRLAQNFAKAGGIKGKITPDAMKSIMQASDWFFEQMSEDLQAYAKHAGRKTIDESDVL 450
Query: 390 YALKRQ 407
+KRQ
Sbjct: 451 TLMKRQ 456
>UniRef50_A6SS64 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 496
Score = 36.3 bits (80), Expect = 1.4
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVK--RISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDV 386
+ K AI LAR G + ++SG + F E + D TY+EHA RKT+ DV
Sbjct: 426 VKKYAIN-LARNGAGRGDKLSGDALDAIMQATDWFFEQISDDLSTYSEHAGRKTIDESDV 484
Query: 387 VYALKR 404
+ ++R
Sbjct: 485 LMLMRR 490
>UniRef50_P48782 Cluster: Archaeal histone A1; n=21;
Euryarchaeota|Rep: Archaeal histone A1 -
Methanobacterium formicicum
Length = 68
Score = 36.3 bits (80), Expect = 1.4
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +3
Query: 228 IRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALK 401
+ R+ + G R+S + VL+ E + +AV +HA RKTV A D+ A+K
Sbjct: 9 VGRIIKNAGAPRVSDDARDALAKVLEEMGEGIAAEAVKLAKHAGRKTVKASDIEMAVK 66
>UniRef50_Q0W3U2 Cluster: Putative archaeal histone A1; n=1;
uncultured methanogenic archaeon RC-I|Rep: Putative
archaeal histone A1 - Uncultured methanogenic archaeon
RC-I
Length = 70
Score = 35.5 bits (78), Expect = 2.5
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
I+K I RL G +RIS +E + ++ + R+A HA RKT+ A D+
Sbjct: 4 ISKAPISRLLSEAGGERISAEAVDEMVKYTEDYVLKIGREASKLCAHAGRKTIKAEDIKL 63
Query: 393 ALKR 404
A++R
Sbjct: 64 AVER 67
>UniRef50_Q9FMG4 Cluster: Similarity to splicing factor; n=6;
Magnoliophyta|Rep: Similarity to splicing factor -
Arabidopsis thaliana (Mouse-ear cress)
Length = 303
Score = 35.1 bits (77), Expect = 3.3
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 284 RDPRRSQSVPRKRDPRRCHIHRTRQEED 367
R PRRS+S PR+R PRR R R +D
Sbjct: 125 RSPRRSRSPPRRRSPRRSRSPRRRSRDD 152
>UniRef50_A6QUY0 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 387
Score = 35.1 bits (77), Expect = 3.3
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +3
Query: 213 ITKPAIRRLARRGG--VKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDV 386
I K R AR GG RIS + + E D TY +HA RKT+ DV
Sbjct: 291 IIKKLATRFARTGGGGKSRISKDTLAAIEQATEWYFEQASDDLSTYAKHAGRKTIDETDV 350
Query: 387 VYALKRQ 407
++RQ
Sbjct: 351 TTLMRRQ 357
>UniRef50_P04554 Cluster: Protamine-2 (Sperm protamine-P2) (Sperm
histone P2) [Contains: Basic nuclear protein HPI1; Basic
nuclear protein HPI2; Basic nuclear protein HPS1; Basic
nuclear protein HPS2; Sperm histone HP4 (Sperm protamine
P4); Sperm histone HP2 (Sperm protamine P2) (P2'); Sperm
histone HP3 (Sperm protamine P3) (P2'')]; n=24;
Eutheria|Rep: Protamine-2 (Sperm protamine-P2) (Sperm
histone P2) [Contains: Basic nuclear protein HPI1; Basic
nuclear protein HPI2; Basic nuclear protein HPS1; Basic
nuclear protein HPS2; Sperm histone HP4 (Sperm protamine
P4); Sperm histone HP2 (Sperm protamine P2) (P2'); Sperm
histone HP3 (Sperm protamine P3) (P2'')] - Homo sapiens
(Human)
Length = 102
Score = 34.7 bits (76), Expect = 4.4
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Frame = +2
Query: 179 HRKVLRDNIQGHH---ETGYPSFGSQRWSETYLRSYIRRD--PRRSQSVPRKRDPRRCHI 343
+R+ L QGHH E G + + T+ +S+ RR RR +R R C
Sbjct: 17 YRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRR 76
Query: 344 HRTR--QEEDRHRYGCCVRSETPRSH 415
+ R + RHR GC R T R H
Sbjct: 77 RKRRSCRHRRRHRRGCRTRKRTCRRH 102
>UniRef50_A0JTV0 Cluster: Aldehyde dehydrogenase; n=4;
Actinobacteria (class)|Rep: Aldehyde dehydrogenase -
Arthrobacter sp. (strain FB24)
Length = 505
Score = 34.3 bits (75), Expect = 5.8
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +3
Query: 135 AVKEAKVLERGALNVTGRCCVITSRXITKPAIR 233
A K AKV+ GA +TG+ C TSR P IR
Sbjct: 285 ARKAAKVVAAGAFGLTGQACTATSRVYVTPGIR 317
>UniRef50_Q7RNR7 Cluster: RNA recognition motif, putative; n=6;
Plasmodium (Vinckeia)|Rep: RNA recognition motif,
putative - Plasmodium yoelii yoelii
Length = 1312
Score = 34.3 bits (75), Expect = 5.8
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = +2
Query: 242 SQRWSETYLRSYIRRDPRRSQSVPRKRDPRRCHIHRTRQEEDRHRYGCCVRSETPRS 412
S R + Y R Y RR+ RR + ++D RR H R R R G R E+ RS
Sbjct: 1007 SVRRRDRYSRKYDRRENRRDEKKSDRKDERR-HSRRDRSRRGESRRGESRRGESRRS 1062
>UniRef50_Q0UBC0 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 468
Score = 34.3 bits (75), Expect = 5.8
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 228 IRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALK 401
+R +A G+ ++ + EE + L V+ +A+ + H KR T++ D+ +ALK
Sbjct: 10 VRDVAESVGIASLADNVVEELARDVDFRLAQVLEEAMKFMRHGKRTTLSTHDISHALK 67
>UniRef50_Q5QRW6 Cluster: NADH-ubiquinone oxidoreductase chain 4;
n=2; Mesobuthus|Rep: NADH-ubiquinone oxidoreductase
chain 4 - Mesobuthus gibbosus (Mediterranean checkered
scorpion)
Length = 439
Score = 33.9 bits (74), Expect = 7.7
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +3
Query: 573 ASNTRRGPSRNMFQELFAVVDVVNQSQVTLVRLIIIKFFVLEY 701
++N PS N+F E+ ++ ++N + +TL+ L++I F Y
Sbjct: 348 SNNMAVPPSMNLFSEICLLIGILNWNYITLIPLMLISFLSASY 390
>UniRef50_Q4Q9T7 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 750
Score = 33.9 bits (74), Expect = 7.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 257 ETYLRSYIRRDPRRSQSVPRKRDPRRCHIHRTR 355
+T +++ RDP Q VPR ++P C +HR R
Sbjct: 467 DTSATNFMYRDPLMEQLVPRTQEPITCFVHRVR 499
>UniRef50_Q58655 Cluster: Probable archaeal histone 3; n=2;
Archaea|Rep: Probable archaeal histone 3 - Methanococcus
jannaschii
Length = 67
Score = 33.9 bits (74), Expect = 7.7
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 234 RLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALK 401
R+ ++ G +R+S + L+ + R +V +HAKRKTV DV AL+
Sbjct: 11 RILKKAGAQRVSEAAGKYFAEALEEIALEIARKSVDLAKHAKRKTVKVEDVKAALR 66
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 703,996,075
Number of Sequences: 1657284
Number of extensions: 10996239
Number of successful extensions: 30013
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 28885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29959
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 110186985653
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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