Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_B24
(1121 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0780 - 20500344-20500655 133 3e-31
09_06_0213 - 21610887-21611198 133 3e-31
09_04_0227 + 15861410-15861721 133 3e-31
07_03_0825 + 21773710-21774021 133 3e-31
05_05_0150 + 22758060-22758371 133 3e-31
05_05_0128 - 22591720-22592031 133 3e-31
04_04_0926 - 29462363-29462674 133 3e-31
03_01_0134 + 1060551-1060862 133 3e-31
02_05_0333 - 28012829-28013140 133 3e-31
01_06_1262 + 35833882-35834193 133 3e-31
05_05_0130 - 22598744-22599043,22599296-22599307 113 2e-25
05_04_0209 - 19073147-19074041,19074117-19074163,19074258-190744... 29 5.1
07_03_0162 - 14565165-14565350,14565757-14566131,14566287-14566922 29 6.7
01_02_0078 - 10894871-10895841,10897268-10898426 29 8.9
>10_08_0780 - 20500344-20500655
Length = 103
Score = 133 bits (321), Expect = 3e-31
Identities = 64/66 (96%), Positives = 66/66 (100%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
ITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 393 ALKRQG 410
ALKRQG
Sbjct: 90 ALKRQG 95
>09_06_0213 - 21610887-21611198
Length = 103
Score = 133 bits (321), Expect = 3e-31
Identities = 64/66 (96%), Positives = 66/66 (100%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
ITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 393 ALKRQG 410
ALKRQG
Sbjct: 90 ALKRQG 95
>09_04_0227 + 15861410-15861721
Length = 103
Score = 133 bits (321), Expect = 3e-31
Identities = 64/66 (96%), Positives = 66/66 (100%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
ITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 393 ALKRQG 410
ALKRQG
Sbjct: 90 ALKRQG 95
>07_03_0825 + 21773710-21774021
Length = 103
Score = 133 bits (321), Expect = 3e-31
Identities = 64/66 (96%), Positives = 66/66 (100%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
ITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 393 ALKRQG 410
ALKRQG
Sbjct: 90 ALKRQG 95
>05_05_0150 + 22758060-22758371
Length = 103
Score = 133 bits (321), Expect = 3e-31
Identities = 64/66 (96%), Positives = 66/66 (100%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
ITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 393 ALKRQG 410
ALKRQG
Sbjct: 90 ALKRQG 95
>05_05_0128 - 22591720-22592031
Length = 103
Score = 133 bits (321), Expect = 3e-31
Identities = 64/66 (96%), Positives = 66/66 (100%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
ITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 393 ALKRQG 410
ALKRQG
Sbjct: 90 ALKRQG 95
>04_04_0926 - 29462363-29462674
Length = 103
Score = 133 bits (321), Expect = 3e-31
Identities = 64/66 (96%), Positives = 66/66 (100%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
ITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 393 ALKRQG 410
ALKRQG
Sbjct: 90 ALKRQG 95
>03_01_0134 + 1060551-1060862
Length = 103
Score = 133 bits (321), Expect = 3e-31
Identities = 64/66 (96%), Positives = 66/66 (100%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
ITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 393 ALKRQG 410
ALKRQG
Sbjct: 90 ALKRQG 95
>02_05_0333 - 28012829-28013140
Length = 103
Score = 133 bits (321), Expect = 3e-31
Identities = 64/66 (96%), Positives = 66/66 (100%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
ITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 393 ALKRQG 410
ALKRQG
Sbjct: 90 ALKRQG 95
>01_06_1262 + 35833882-35834193
Length = 103
Score = 133 bits (321), Expect = 3e-31
Identities = 64/66 (96%), Positives = 66/66 (100%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
ITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 393 ALKRQG 410
ALKRQG
Sbjct: 90 ALKRQG 95
>05_05_0130 - 22598744-22599043,22599296-22599307
Length = 103
Score = 113 bits (272), Expect = 2e-25
Identities = 54/66 (81%), Positives = 60/66 (90%)
Frame = +3
Query: 213 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 392
I KP IRRLAR+GGVKRISGLIY+ETRGVL++FL+NVI DA+TYTEHA RKTV AMDVVY
Sbjct: 30 IAKPVIRRLARKGGVKRISGLIYKETRGVLEIFLKNVICDAITYTEHAHRKTVMAMDVVY 89
Query: 393 ALKRQG 410
ALK QG
Sbjct: 90 ALKLQG 95
>05_04_0209 -
19073147-19074041,19074117-19074163,19074258-19074437,
19074839-19074955,19075105-19075227,19075391-19075776,
19076177-19076303,19077140-19077202,19078035-19078086,
19078189-19080023
Length = 1274
Score = 29.5 bits (63), Expect = 5.1
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +3
Query: 201 TSRXITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVT 341
T+ T +R R+ V R S L+ GVL V LENV+ D T
Sbjct: 124 TTAEPTPEGVRWTVRKD-VTRYSALLRSPPGGVLSVMLENVVNDKYT 169
>07_03_0162 - 14565165-14565350,14565757-14566131,14566287-14566922
Length = 398
Score = 29.1 bits (62), Expect = 6.7
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +2
Query: 224 GYPSFGSQRWSETYLRSYIRR---DPRRSQSVPRKRDPRRCHIHRTRQEE 364
GYP + +R YL++Y R +PR +QSV R + R R E+
Sbjct: 74 GYPEYPDRRQFVDYLQAYAARAGVEPRFNQSVTSARYDDAAGLWRVRAED 123
>01_02_0078 - 10894871-10895841,10897268-10898426
Length = 709
Score = 28.7 bits (61), Expect = 8.9
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 287 DPRRSQSVPRKRDPRRCH--IHRTRQEEDRHRYGCCVRSETPRSHPXTVSAV 436
+P + PR+R RR H I R R+ + RH G VR + + V AV
Sbjct: 559 EPSALTAAPRRRQIRRVHVRIRRARRCQARHAVGELVRRQARHAVGEIVRAV 610
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,246,232
Number of Sequences: 37544
Number of extensions: 308947
Number of successful extensions: 801
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3386386840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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