Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_B22
         (1141 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416...    87   3e-17
07_03_0445 - 18281715-18281832,18282274-18282505,18283486-182835...    83   5e-16
12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215...    81   2e-15
10_08_0945 - 21738643-21738760,21740056-21740287,21740582-217406...    76   5e-14
05_04_0341 + 20420657-20420925,20421192-20421246                       29   6.8  
06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    29   9.0  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   9.0  

>05_07_0347 -
           29440541-29440664,29440908-29441020,29441522-29441689,
           29442341-29442391,29442518-29442555,29442885-29442978
          Length = 195

 Score = 86.6 bits (205), Expect = 3e-17
 Identities = 38/61 (62%), Positives = 46/61 (75%)
 Frame = -2

Query: 252 AEQRERTFIMVKPDGVQRGLVGTIIVRFEKKGFKLVGLKFVWPSEELLQQHYSDXXSRPF 73
           A + ERTFI +KPDGVQRGL+  I+ RFE+KGFKLV +K V PS+E  Q+HY D   RPF
Sbjct: 42  AAEMERTFIAIKPDGVQRGLISEILSRFERKGFKLVAIKLVVPSKEFAQKHYHDLKDRPF 101

Query: 72  F 70
           F
Sbjct: 102 F 102


>07_03_0445 -
           18281715-18281832,18282274-18282505,18283486-18283534,
           18283733-18283783
          Length = 149

 Score = 82.6 bits (195), Expect = 5e-16
 Identities = 36/58 (62%), Positives = 44/58 (75%)
 Frame = -2

Query: 240 ERTFIMVKPDGVQRGLVGTIIVRFEKKGFKLVGLKFVWPSEELLQQHYSDXXSRPFFP 67
           E++FIM+KPDGVQRGL+G II RFEKKGF L G+KF+       QQHY+D   +PFFP
Sbjct: 2   EQSFIMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFP 59


>12_02_0695 +
           22220054-22220056,22221226-22221276,22221415-22221501,
           22222064-22222144,22222241-22222353,22222482-22222531,
           22222790-22222857
          Length = 150

 Score = 81.0 bits (191), Expect = 2e-15
 Identities = 36/58 (62%), Positives = 44/58 (75%)
 Frame = -2

Query: 240 ERTFIMVKPDGVQRGLVGTIIVRFEKKGFKLVGLKFVWPSEELLQQHYSDXXSRPFFP 67
           E+++IM+KPDGVQRGLVG II RFEKKGF L GLK     ++L Q+HY D   +PFFP
Sbjct: 3   EQSYIMIKPDGVQRGLVGEIISRFEKKGFVLKGLKLFQCPKDLAQEHYKDLKEKPFFP 60


>10_08_0945 -
           21738643-21738760,21740056-21740287,21740582-21740630,
           21740720-21740776
          Length = 151

 Score = 76.2 bits (179), Expect = 5e-14
 Identities = 32/57 (56%), Positives = 43/57 (75%)
 Frame = -2

Query: 240 ERTFIMVKPDGVQRGLVGTIIVRFEKKGFKLVGLKFVWPSEELLQQHYSDXXSRPFF 70
           E+TFIM+KPDGVQRGL+G +I RFEKKGF L  +K +   +   ++HY+D  S+PFF
Sbjct: 4   EQTFIMIKPDGVQRGLIGEVIGRFEKKGFYLKAMKLINVEKSFAEKHYADLSSKPFF 60


>05_04_0341 + 20420657-20420925,20421192-20421246
          Length = 107

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -3

Query: 962 GERRTGIPVXRQGRNRRAHEG 900
           GERR G+P  R+GR RR   G
Sbjct: 6   GERRPGLPCRRRGRGRREIRG 26


>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 15/49 (30%), Positives = 19/49 (38%)
 Frame = +1

Query: 781 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLXAPSCALLFRP 927
           CWR  +        T  D Q    +    +KD    P   PSC L+F P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIP 331


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +1

Query: 613 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 768
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,502,975
Number of Sequences: 37544
Number of extensions: 465472
Number of successful extensions: 1258
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3456450016
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)