Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_B22
         (1141 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13107-1|CAA31500.1|  153|Drosophila melanogaster protein ( Dros...   105   1e-22
AY113576-1|AAM29581.1|  153|Drosophila melanogaster RH27794p pro...   105   1e-22
AE014297-4796|AAF57188.3|  172|Drosophila melanogaster CG2210-PA...   105   1e-22
BT001459-1|AAN71214.1|  118|Drosophila melanogaster GM19775p pro...   103   5e-22
X85331-1|CAA59680.1|  437|Drosophila melanogaster msh protein.         32   1.7  
AY069763-1|AAL39908.1|  387|Drosophila melanogaster RE01365p pro...    31   3.9  
AF202050-1|AAF20908.1|  244|Drosophila melanogaster nmdyn-D7 pro...    31   3.9  
AE014297-999|AAF54425.1|  387|Drosophila melanogaster CG8362-PA ...    31   3.9  

>X13107-1|CAA31500.1|  153|Drosophila melanogaster protein (
           Drosophila melanogasterawd mRNA ( abnormal wing disc ).
           ).
          Length = 153

 Score =  105 bits (252), Expect = 1e-22
 Identities = 47/63 (74%), Positives = 54/63 (85%)
 Frame = -2

Query: 255 MAEQRERTFIMVKPDGVQRGLVGTIIVRFEKKGFKLVGLKFVWPSEELLQQHYSDXXSRP 76
           MA  +ERTFIMVKPDGVQRGLVG II RFE+KGFKLV LKF W S+ELL++HY+D  +RP
Sbjct: 1   MAANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARP 60

Query: 75  FFP 67
           FFP
Sbjct: 61  FFP 63


>AY113576-1|AAM29581.1|  153|Drosophila melanogaster RH27794p
           protein.
          Length = 153

 Score =  105 bits (252), Expect = 1e-22
 Identities = 47/63 (74%), Positives = 54/63 (85%)
 Frame = -2

Query: 255 MAEQRERTFIMVKPDGVQRGLVGTIIVRFEKKGFKLVGLKFVWPSEELLQQHYSDXXSRP 76
           MA  +ERTFIMVKPDGVQRGLVG II RFE+KGFKLV LKF W S+ELL++HY+D  +RP
Sbjct: 1   MAANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARP 60

Query: 75  FFP 67
           FFP
Sbjct: 61  FFP 63


>AE014297-4796|AAF57188.3|  172|Drosophila melanogaster CG2210-PA
           protein.
          Length = 172

 Score =  105 bits (252), Expect = 1e-22
 Identities = 47/63 (74%), Positives = 54/63 (85%)
 Frame = -2

Query: 255 MAEQRERTFIMVKPDGVQRGLVGTIIVRFEKKGFKLVGLKFVWPSEELLQQHYSDXXSRP 76
           MA  +ERTFIMVKPDGVQRGLVG II RFE+KGFKLV LKF W S+ELL++HY+D  +RP
Sbjct: 20  MAANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARP 79

Query: 75  FFP 67
           FFP
Sbjct: 80  FFP 82


>BT001459-1|AAN71214.1|  118|Drosophila melanogaster GM19775p
           protein.
          Length = 118

 Score =  103 bits (247), Expect = 5e-22
 Identities = 46/62 (74%), Positives = 53/62 (85%)
 Frame = -2

Query: 252 AEQRERTFIMVKPDGVQRGLVGTIIVRFEKKGFKLVGLKFVWPSEELLQQHYSDXXSRPF 73
           A  +ERTFIMVKPDGVQRGLVG II RFE+KGFKLV LKF W S+ELL++HY+D  +RPF
Sbjct: 1   AANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPF 60

Query: 72  FP 67
           FP
Sbjct: 61  FP 62


>X85331-1|CAA59680.1|  437|Drosophila melanogaster msh protein.
          Length = 437

 Score = 31.9 bits (69), Expect = 1.7
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +2

Query: 107 WRSSSDGHTNFKPTSLKPFFSKRTIMVPTRPRCTPS 214
           WRS+S  H   K TS    FS  +++  TRPR  P+
Sbjct: 41  WRSASAAHHLHKTTSRLSNFSVASLLADTRPRTPPN 76


>AY069763-1|AAL39908.1|  387|Drosophila melanogaster RE01365p
           protein.
          Length = 387

 Score = 30.7 bits (66), Expect = 3.9
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -2

Query: 243 RERTFIMVKPDGVQRGLVGTIIVRFEKKGFKLVGLKFV 130
           +  T  ++KP  ++ GL+G II      GF+L  ++ +
Sbjct: 245 KNTTLAIIKPHSIKDGLLGDIISEILSNGFRLTAMRMI 282


>AF202050-1|AAF20908.1|  244|Drosophila melanogaster nmdyn-D7
           protein.
          Length = 244

 Score = 30.7 bits (66), Expect = 3.9
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -2

Query: 243 RERTFIMVKPDGVQRGLVGTIIVRFEKKGFKLVGLKFV 130
           +  T  ++KP  ++ GL+G II      GF+L  ++ +
Sbjct: 102 KNTTLAIIKPHSIKDGLLGDIISEILSNGFRLTAMRMI 139


>AE014297-999|AAF54425.1|  387|Drosophila melanogaster CG8362-PA
           protein.
          Length = 387

 Score = 30.7 bits (66), Expect = 3.9
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -2

Query: 243 RERTFIMVKPDGVQRGLVGTIIVRFEKKGFKLVGLKFV 130
           +  T  ++KP  ++ GL+G II      GF+L  ++ +
Sbjct: 245 KNTTLAIIKPHSIKDGLLGDIISEILSNGFRLTAMRMI 282


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,023,930
Number of Sequences: 53049
Number of extensions: 764578
Number of successful extensions: 1637
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1635
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5984863122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)