Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_B21
         (1130 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0126 - 13797395-13797451,13797590-13797707,13797802-13798004     29   5.1  
12_02_1088 - 25954506-25954652,25954769-25954918,25955011-259551...    29   6.8  
11_04_0224 + 15059904-15059910,15059955-15060185,15060345-150604...    29   6.8  
03_05_0451 - 24456923-24457069,24457161-24457310,24457408-244575...    29   6.8  
01_01_0703 - 5425713-5425862,5426302-5426451,5426853-5426964,542...    29   6.8  
04_04_0841 - 28574497-28574883,28575815-28576188,28576262-285764...    29   9.0  

>07_03_0126 - 13797395-13797451,13797590-13797707,13797802-13798004
          Length = 125

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = +1

Query: 55  NQMAELEXEYTRTKYLDXXXXXXXXXXXXXXXXTIKIWFQNRRIKEK 195
           +Q+  LE  + R  YL                  +K WFQNRR ++K
Sbjct: 61  DQIKHLESVFERCTYLGGNQRVQLAKKLGMEERQVKFWFQNRRTRKK 107


>12_02_1088 -
           25954506-25954652,25954769-25954918,25955011-25955116,
           25955247-25955569,25955656-25955790,25956310-25956444,
           25956445-25956525,25956619-25956807,25956935-25957127,
           25957244-25957350,25957457-25957531,25957619-25957774,
           25957968-25958051,25958152-25958265,25958345-25958440,
           25958543-25958633,25958721-25958836,25958934-25959093,
           25960390-25960634
          Length = 900

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = +1

Query: 157 IKIWFQNRRIKEKK 198
           IK+WFQNRR +EK+
Sbjct: 74  IKVWFQNRRCREKQ 87


>11_04_0224 +
           15059904-15059910,15059955-15060185,15060345-15060424,
           15060497-15060547,15060548-15060670,15062151-15062184,
           15062363-15062441,15062779-15062848,15075787-15075889,
           15076247-15076284,15076449-15076550,15077027-15077107,
           15077506-15077657,15077731-15077857,15078193-15078311,
           15078636-15078749,15079001-15079214
          Length = 574

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 415 TCDSKYFKP-DARLQIAVAVSPNCNRQIILIHILK 516
           TC  KY  P +AR + ++    NC + I ++H+L+
Sbjct: 311 TCRGKYSAPGNARCEQSIQAIRNCTKDINMLHVLE 345


>03_05_0451 -
           24456923-24457069,24457161-24457310,24457408-24457513,
           24457715-24458040,24458129-24458263,24458350-24458430,
           24458516-24458704,24458794-24458986,24459068-24459174,
           24459280-24459354,24459446-24459601,24459745-24459828,
           24459933-24460046,24460119-24460214,24460302-24460392,
           24460500-24460615,24460878-24461037,24461964-24462217
          Length = 859

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = +1

Query: 157 IKIWFQNRRIKEKK 198
           IK+WFQNRR +EK+
Sbjct: 77  IKVWFQNRRCREKQ 90


>01_01_0703 -
           5425713-5425862,5426302-5426451,5426853-5426964,
           5427120-5427481,5427578-5427712,5427812-5427889,
           5427989-5428174,5428266-5428452,5428552-5428658,
           5428732-5428806,5428885-5429040,5429165-5429437,
           5429548-5429643,5429724-5429814,5429883-5430385
          Length = 886

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = +1

Query: 157 IKIWFQNRRIKEKK 198
           IK+WFQNRR +EK+
Sbjct: 50  IKVWFQNRRCREKQ 63


>04_04_0841 -
           28574497-28574883,28575815-28576188,28576262-28576439,
           28576816-28576896,28578134-28578361,28578460-28578579,
           28578646-28579353,28579471-28579588,28579686-28579978,
           28580101-28580169
          Length = 851

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 15/52 (28%), Positives = 21/52 (40%)
 Frame = +1

Query: 58  QMAELEXEYTRTKYLDXXXXXXXXXXXXXXXXTIKIWFQNRRIKEKKILTQH 213
           Q+ ELE  +    + D                 +K WFQNRR + K  L +H
Sbjct: 115 QIQELEAMFKECPHPDEKQRAELSKRLGLEPRQVKFWFQNRRTQMKMQLERH 166


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,064,156
Number of Sequences: 37544
Number of extensions: 430606
Number of successful extensions: 794
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3421418428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)