Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_B20
(1188 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098992-15|AAN39673.1| 340|Caenorhabditis elegans Hypothetical... 109 5e-24
AF098992-14|AAD34669.1| 346|Caenorhabditis elegans Hypothetical... 109 5e-24
AF098992-13|AAN39672.1| 385|Caenorhabditis elegans Hypothetical... 109 5e-24
U28738-7|AAA68312.1| 341|Caenorhabditis elegans Hypothetical pr... 70 3e-12
U28738-6|AAT92056.1| 274|Caenorhabditis elegans Hypothetical pr... 70 3e-12
U28738-5|AAT92055.1| 342|Caenorhabditis elegans Hypothetical pr... 70 3e-12
Z68105-4|CAA92120.2| 304|Caenorhabditis elegans Hypothetical pr... 59 7e-09
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z92973-8|CAO82049.1| 517|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z81554-6|CAO82038.1| 517|Caenorhabditis elegans Hypothetical pr... 29 4.9
U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily ass... 29 4.9
AC006677-10|AAF39946.1| 330|Caenorhabditis elegans Serpentine r... 29 4.9
U43375-3|AAA83620.1| 110|Caenorhabditis elegans Hypothetical pr... 29 8.5
AL033514-10|CAE47472.1| 436|Caenorhabditis elegans Hypothetical... 29 8.5
AL033514-9|CAA22098.1| 605|Caenorhabditis elegans Hypothetical ... 29 8.5
>AF098992-15|AAN39673.1| 340|Caenorhabditis elegans Hypothetical
protein F53C3.13c protein.
Length = 340
Score = 109 bits (261), Expect = 5e-24
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Frame = +2
Query: 326 KIIVDFVVLACVSFPLLALLLWAEPYHRGYFEDDLSLRLPFKQQSISEGLLAGVGFAFII 505
+++ DF+VL ++ PL + P RG++ DD S+R PF+ ++ +L VG I
Sbjct: 11 RVLCDFLVLTLIAIPLYVFHEFIPPVRRGFYCDDESIRYPFRDSKVTRQMLIVVGLLIPI 70
Query: 506 FTVLITEIVRDRQG-KGIGGKF----LSGSLIPGWLWETYSTVGIFTFGAACQQLTANLA 670
+L TE+ R K +F + + + Y +G F G QL ++A
Sbjct: 71 LLILATELFRTLAWEKKCETEFKTYHVRNHSVHRLVVRLYCFIGYFFVGVCFNQLMVDIA 130
Query: 671 KYVIGRLRPHFFDVCRP-IPDAGSSQNALGYIQEYRCSGGDEALLKDMRLSFPSAHASFS 847
KY IGR RPHF DVCRP I SQ L YI +++C+ D + + +LSF S H++FS
Sbjct: 131 KYTIGRQRPHFMDVCRPDIGYQTCSQPDL-YITDFKCTTTDTKKIHEAQLSFYSGHSAFS 189
Query: 848 MYCAIFFIFY 877
Y A F Y
Sbjct: 190 FYAAWFTSLY 199
>AF098992-14|AAD34669.1| 346|Caenorhabditis elegans Hypothetical
protein F53C3.13a protein.
Length = 346
Score = 109 bits (261), Expect = 5e-24
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Frame = +2
Query: 326 KIIVDFVVLACVSFPLLALLLWAEPYHRGYFEDDLSLRLPFKQQSISEGLLAGVGFAFII 505
+++ DF+VL ++ PL + P RG++ DD S+R PF+ ++ +L VG I
Sbjct: 11 RVLCDFLVLTLIAIPLYVFHEFIPPVRRGFYCDDESIRYPFRDSKVTRQMLIVVGLLIPI 70
Query: 506 FTVLITEIVRDRQG-KGIGGKF----LSGSLIPGWLWETYSTVGIFTFGAACQQLTANLA 670
+L TE+ R K +F + + + Y +G F G QL ++A
Sbjct: 71 LLILATELFRTLAWEKKCETEFKTYHVRNHSVHRLVVRLYCFIGYFFVGVCFNQLMVDIA 130
Query: 671 KYVIGRLRPHFFDVCRP-IPDAGSSQNALGYIQEYRCSGGDEALLKDMRLSFPSAHASFS 847
KY IGR RPHF DVCRP I SQ L YI +++C+ D + + +LSF S H++FS
Sbjct: 131 KYTIGRQRPHFMDVCRPDIGYQTCSQPDL-YITDFKCTTTDTKKIHEAQLSFYSGHSAFS 189
Query: 848 MYCAIFFIFY 877
Y A F Y
Sbjct: 190 FYAAWFTSLY 199
>AF098992-13|AAN39672.1| 385|Caenorhabditis elegans Hypothetical
protein F53C3.13b protein.
Length = 385
Score = 109 bits (261), Expect = 5e-24
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Frame = +2
Query: 326 KIIVDFVVLACVSFPLLALLLWAEPYHRGYFEDDLSLRLPFKQQSISEGLLAGVGFAFII 505
+++ DF+VL ++ PL + P RG++ DD S+R PF+ ++ +L VG I
Sbjct: 11 RVLCDFLVLTLIAIPLYVFHEFIPPVRRGFYCDDESIRYPFRDSKVTRQMLIVVGLLIPI 70
Query: 506 FTVLITEIVRDRQG-KGIGGKF----LSGSLIPGWLWETYSTVGIFTFGAACQQLTANLA 670
+L TE+ R K +F + + + Y +G F G QL ++A
Sbjct: 71 LLILATELFRTLAWEKKCETEFKTYHVRNHSVHRLVVRLYCFIGYFFVGVCFNQLMVDIA 130
Query: 671 KYVIGRLRPHFFDVCRP-IPDAGSSQNALGYIQEYRCSGGDEALLKDMRLSFPSAHASFS 847
KY IGR RPHF DVCRP I SQ L YI +++C+ D + + +LSF S H++FS
Sbjct: 131 KYTIGRQRPHFMDVCRPDIGYQTCSQPDL-YITDFKCTTTDTKKIHEAQLSFYSGHSAFS 189
Query: 848 MYCAIFFIFY 877
Y A F Y
Sbjct: 190 FYAAWFTSLY 199
>U28738-7|AAA68312.1| 341|Caenorhabditis elegans Hypothetical
protein T28D9.3a protein.
Length = 341
Score = 70.1 bits (164), Expect = 3e-12
Identities = 53/167 (31%), Positives = 79/167 (47%), Gaps = 10/167 (5%)
Frame = +2
Query: 407 RGYFEDDLSLRLPFKQQSISEGLLAGVGFAFIIFTVLITEIVRDRQGKGIGGKFLSGSLI 586
RG+F DD S+R +++ +I+ L TVL E R + K S
Sbjct: 53 RGFFCDDDSIRYEYRKDTITAVQLMLYNLVLNAATVLFVEYYRMQ-------KVESNINN 105
Query: 587 PGWLWETYSTVGIFT-----FGAACQQLTANLA-----KYVIGRLRPHFFDVCRPIPDAG 736
P + W +F FG + N+A K+V+GRLRPHF DVC+ D
Sbjct: 106 PRYRWRNNHLHVLFVRLLTYFGYSQIGFVMNIALNIVTKHVVGRLRPHFLDVCKLANDTC 165
Query: 737 SSQNALGYIQEYRCSGGDEALLKDMRLSFPSAHASFSMYCAIFFIFY 877
+ ++ YI +Y C+G E +L + R SF S H++ S+YCA + Y
Sbjct: 166 VTGDSHRYITDYTCTGPPELVL-EARKSFYSGHSAVSLYCATWSALY 211
>U28738-6|AAT92056.1| 274|Caenorhabditis elegans Hypothetical
protein T28D9.3c protein.
Length = 274
Score = 70.1 bits (164), Expect = 3e-12
Identities = 53/167 (31%), Positives = 79/167 (47%), Gaps = 10/167 (5%)
Frame = +2
Query: 407 RGYFEDDLSLRLPFKQQSISEGLLAGVGFAFIIFTVLITEIVRDRQGKGIGGKFLSGSLI 586
RG+F DD S+R +++ +I+ L TVL E R + K S
Sbjct: 54 RGFFCDDDSIRYEYRKDTITAVQLMLYNLVLNAATVLFVEYYRMQ-------KVESNINN 106
Query: 587 PGWLWETYSTVGIFT-----FGAACQQLTANLA-----KYVIGRLRPHFFDVCRPIPDAG 736
P + W +F FG + N+A K+V+GRLRPHF DVC+ D
Sbjct: 107 PRYRWRNNHLHVLFVRLLTYFGYSQIGFVMNIALNIVTKHVVGRLRPHFLDVCKLANDTC 166
Query: 737 SSQNALGYIQEYRCSGGDEALLKDMRLSFPSAHASFSMYCAIFFIFY 877
+ ++ YI +Y C+G E +L + R SF S H++ S+YCA + Y
Sbjct: 167 VTGDSHRYITDYTCTGPPELVL-EARKSFYSGHSAVSLYCATWSALY 212
>U28738-5|AAT92055.1| 342|Caenorhabditis elegans Hypothetical
protein T28D9.3b protein.
Length = 342
Score = 70.1 bits (164), Expect = 3e-12
Identities = 53/167 (31%), Positives = 79/167 (47%), Gaps = 10/167 (5%)
Frame = +2
Query: 407 RGYFEDDLSLRLPFKQQSISEGLLAGVGFAFIIFTVLITEIVRDRQGKGIGGKFLSGSLI 586
RG+F DD S+R +++ +I+ L TVL E R + K S
Sbjct: 54 RGFFCDDDSIRYEYRKDTITAVQLMLYNLVLNAATVLFVEYYRMQ-------KVESNINN 106
Query: 587 PGWLWETYSTVGIFT-----FGAACQQLTANLA-----KYVIGRLRPHFFDVCRPIPDAG 736
P + W +F FG + N+A K+V+GRLRPHF DVC+ D
Sbjct: 107 PRYRWRNNHLHVLFVRLLTYFGYSQIGFVMNIALNIVTKHVVGRLRPHFLDVCKLANDTC 166
Query: 737 SSQNALGYIQEYRCSGGDEALLKDMRLSFPSAHASFSMYCAIFFIFY 877
+ ++ YI +Y C+G E +L + R SF S H++ S+YCA + Y
Sbjct: 167 VTGDSHRYITDYTCTGPPELVL-EARKSFYSGHSAVSLYCATWSALY 212
>Z68105-4|CAA92120.2| 304|Caenorhabditis elegans Hypothetical
protein F13E6.5 protein.
Length = 304
Score = 58.8 bits (136), Expect = 7e-09
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 11/192 (5%)
Frame = +2
Query: 335 VDFVVLACVSFPLLALLLW-----AEPYHRGYFEDDLSLRLPFKQQSIS--EGLLAGVGF 493
+D V++ +S +L LW PY R D+S++ PFK+ ++ L+ +G
Sbjct: 40 LDIVIVLGIS---CSLFLWFSGSGINPYERAMPCGDISIQQPFKENTVGLKHLLVITLGS 96
Query: 494 AFIIFTVLITEIVRDRQGKGIG--GKFLSGSLIPGWLWETYSTVGIFTFGAACQQLTANL 667
F+I V + E + + KG KF S + I TY + AAC
Sbjct: 97 PFLI--VALVEAILHFKSKGSNRLAKFFSATTI------TY--LKYLLMYAACT-FAMEF 145
Query: 668 AKYVIGRLRPHFFDVCRPIPDAGSSQNALGYI--QEYRCSGGDEALLKDMRLSFPSAHAS 841
K +GRLRPHFF VC+P + +I + C+ + ++ R SFPS H +
Sbjct: 146 LKCYVGRLRPHFFSVCKPDWSKVDCTDKQSFIDSSDLVCTNPNPRKIRTARTSFPSGHTA 205
Query: 842 FSMYCAIFFIFY 877
+ + +F Y
Sbjct: 206 AAFHVFLFVYIY 217
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 31.1 bits (67), Expect = 1.6
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = -3
Query: 715 ADIEEMWAQSPDHVLREIGCELLTGGPKREDSHG-RVRLPQPAGYERPRQKLSADTLTLP 539
AD+ + + Q+ + +R +GC LL +D G V PAGY R + +S LP
Sbjct: 119 ADLNQYYTQNAE--MRSLGCALLF--ISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLP 174
Query: 538 VTHYLSD*NRENNE 497
T +L ++ +E
Sbjct: 175 ATSFLEKKIKKKSE 188
>Z92973-8|CAO82049.1| 517|Caenorhabditis elegans Hypothetical
protein Y6G8.8 protein.
Length = 517
Score = 29.5 bits (63), Expect = 4.9
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 239 MLPLLLGLYGSVTSALKASFTMAVDRLIWKIIVDFVVLACVSF 367
M P +LG +V+SALK F V + + D ++ +CV F
Sbjct: 1 MAPEILGQSSTVSSALKIIFIAQVVEICVSVEDDLILFSCVVF 43
>Z81554-6|CAO82038.1| 517|Caenorhabditis elegans Hypothetical
protein Y6G8.8 protein.
Length = 517
Score = 29.5 bits (63), Expect = 4.9
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 239 MLPLLLGLYGSVTSALKASFTMAVDRLIWKIIVDFVVLACVSF 367
M P +LG +V+SALK F V + + D ++ +CV F
Sbjct: 1 MAPEILGQSSTVSSALKIIFIAQVVEICVSVEDDLILFSCVVF 43
>U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily
assigned gene nameprotein 158 protein.
Length = 1003
Score = 29.5 bits (63), Expect = 4.9
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 494 AFIIFTVLITEIVRDRQGKGIGGKFLSGSLIPGWLWETYSTVGIF--TFGAACQQL 655
AFI + ++RD+ G+ +GG+ + L W +G F TFGAA Q L
Sbjct: 379 AFIFGGAIDNAVLRDKNGQSVGGQMVVALL--SWPSPWVLLIGSFLSTFGAALQCL 432
>AC006677-10|AAF39946.1| 330|Caenorhabditis elegans Serpentine
receptor, class j protein18 protein.
Length = 330
Score = 29.5 bits (63), Expect = 4.9
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 266 GSVTSALKASFTMAVDRLIWKIIVDFVVLACVSFPLLALLLWAEPY 403
GS T +LK + RL W + + ++ CVSF + L+L+ +
Sbjct: 226 GSATMSLKTA--QMQKRLFWALTIQTIIPICVSFMPVTLVLYGSAF 269
>U43375-3|AAA83620.1| 110|Caenorhabditis elegans Hypothetical
protein K09C4.7 protein.
Length = 110
Score = 28.7 bits (61), Expect = 8.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 389 WAEPYHRGYFEDDLSLRLPFKQQSISE 469
W P+HR + DL RLP++ + I++
Sbjct: 72 WQLPWHRSRYSKDLLNRLPYQSELIAQ 98
>AL033514-10|CAE47472.1| 436|Caenorhabditis elegans Hypothetical
protein Y75B8A.9b protein.
Length = 436
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 389 WAEPYHRGYFEDDLSLRLPFKQQSISEGLLA 481
W P HR YFED ++ P K +++ GL A
Sbjct: 312 WDYP-HRSYFEDPMNYVNPLKSPTMAGGLFA 341
>AL033514-9|CAA22098.1| 605|Caenorhabditis elegans Hypothetical
protein Y75B8A.9a protein.
Length = 605
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 389 WAEPYHRGYFEDDLSLRLPFKQQSISEGLLA 481
W P HR YFED ++ P K +++ GL A
Sbjct: 312 WDYP-HRSYFEDPMNYVNPLKSPTMAGGLFA 341
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,837,074
Number of Sequences: 27780
Number of extensions: 507153
Number of successful extensions: 1561
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1547
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3255550896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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