Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_B20
         (1188 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   7.0  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    22   9.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   9.2  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    22   9.2  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    22   9.2  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   9.2  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 677 VIGRLRPHFFDVCRPI 724
           ++G+   HFFD+ RP+
Sbjct: 238 LVGKKITHFFDLVRPL 253


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 738 DPASGIGLQTSKKCGRSL 685
           DPA+   + T  +CGRSL
Sbjct: 97  DPANEFIVSTRVRCGRSL 114


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 649 LTGGPKREDSHGRVRLPQPAGYERPR 572
           LTG  +   + GR+ + +P G  RP+
Sbjct: 187 LTGETRLSATKGRLVITEPVGSVRPK 212


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 693 AHISSMSAGRSRTPDPRKTP 752
           A+       R   PDP+KTP
Sbjct: 192 AYFGFYDTARGMLPDPKKTP 211


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 693 AHISSMSAGRSRTPDPRKTP 752
           A+       R   PDP+KTP
Sbjct: 192 AYFGFYDTARGMLPDPKKTP 211


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 738 DPASGIGLQTSKKCGRSL 685
           DPA+   + T  +CGRSL
Sbjct: 113 DPANEFIVSTRVRCGRSL 130


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 304,888
Number of Sequences: 438
Number of extensions: 6505
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 40488336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)