Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_B18
         (1220 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83234-7|CAB76745.1|  667|Caenorhabditis elegans Hypothetical pr...    50   4e-06
Z82067-4|CAB76738.1|  667|Caenorhabditis elegans Hypothetical pr...    50   4e-06
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p...    29   6.7  
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr...    29   6.7  

>Z83234-7|CAB76745.1|  667|Caenorhabditis elegans Hypothetical
           protein W03H9.4 protein.
          Length = 667

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 19/36 (52%), Positives = 27/36 (75%)
 Frame = +1

Query: 658 YTNQDNPFGDSALTNTFVWAKKLAKEGVKNVSREEL 765
           YTN +NPF D+ LT TFVW KKL +EG   ++++E+
Sbjct: 90  YTNLNNPFNDTKLTQTFVWGKKLEREGKSGLTQDEI 125


>Z82067-4|CAB76738.1|  667|Caenorhabditis elegans Hypothetical
           protein W03H9.4 protein.
          Length = 667

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 19/36 (52%), Positives = 27/36 (75%)
 Frame = +1

Query: 658 YTNQDNPFGDSALTNTFVWAKKLAKEGVKNVSREEL 765
           YTN +NPF D+ LT TFVW KKL +EG   ++++E+
Sbjct: 90  YTNLNNPFNDTKLTQTFVWGKKLEREGKSGLTQDEI 125


>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
            protein F36A2.13 protein.
          Length = 2944

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 20/52 (38%), Positives = 25/52 (48%)
 Frame = -1

Query: 815  FSNSILFSNCFXLFKASSSSLDTFFTPSLASFLAQTNVLVSAESPNGLSWLV 660
            F + +LF+N   LFKA  S LDT F  S+    A    +     PNG   LV
Sbjct: 2723 FYDPVLFNNLRALFKAHPSELDTDF--SIVEQSADGKAVTVNLKPNGDEVLV 2772


>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
            F36A2.13 protein.
          Length = 2944

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 20/52 (38%), Positives = 25/52 (48%)
 Frame = -1

Query: 815  FSNSILFSNCFXLFKASSSSLDTFFTPSLASFLAQTNVLVSAESPNGLSWLV 660
            F + +LF+N   LFKA  S LDT F  S+    A    +     PNG   LV
Sbjct: 2723 FYDPVLFNNLRALFKAHPSELDTDF--SIVEQSADGKAVTVNLKPNGDEVLV 2772


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,936,884
Number of Sequences: 27780
Number of extensions: 214993
Number of successful extensions: 527
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3370329934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)