Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_B16
         (1151 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    27   0.20 
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    24   2.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   3.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   7.6  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    22   7.6  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 27.5 bits (58), Expect = 0.20
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = -2

Query: 613 FLLIFLFKVPSCFFIKFFQL 554
           +LLIF+ ++P CFF++  +L
Sbjct: 180 YLLIFVQQIPFCFFVRVIRL 199


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -2

Query: 277 VCSHLCDGSNVHHHHIFNFRIFLLIKSTRQRHLVCLFNS 161
           +CS      ++ H  I+     LL+KS  Q H  C   S
Sbjct: 4   ICSGNLGSMDIKHEMIYREDDVLLVKSEPQLHSPCATGS 42


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 14/60 (23%), Positives = 27/60 (45%)
 Frame = +2

Query: 425 IDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAELLHYETSEQLEELYKKTAWYFEEKY 604
           I+L K   S  D++K     A      ++L H   +L+Y  S + E        +F++++
Sbjct: 128 INLLKHYQSTTDLHKKIRYSAFGMIFVALLEHCFSMLNYVYSSKCENNSTGVEHFFKKQF 187


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +2

Query: 593 EEKYKKKASAYDFFKQAAVDPSVLDECGLDEETKDVLLANIK 718
           E+K ++K  A+       VDP+ ++    DEET   + +N++
Sbjct: 413 EQKSRRKGPAFK------VDPTQVESEEEDEETSTTVFSNVE 448


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 725 LTSQAVKIRADIECACY 775
           + S  VK+R   EC CY
Sbjct: 112 VNSMDVKLREPAECKCY 128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,820
Number of Sequences: 336
Number of extensions: 4379
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 33506525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)