Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_B16
         (1151 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    28   0.45 
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           26   1.8  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          25   5.5  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 28.3 bits (60), Expect = 0.45
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 467 KCTERYAKAKAVNSILRHVAELLHYETSEQ 556
           KC +R   A  V+SILR+ A + H  T  Q
Sbjct: 793 KCAKRRLLASVVDSILRYAAPVWHEATKNQ 822


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 26.2 bits (55), Expect = 1.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 988  QMAPKVVTATDXAXWXDXWNARR 1056
            Q  P+VV A D   W + W +RR
Sbjct: 170  QSHPQVVVAGDFNAWHEEWGSRR 192


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 24.6 bits (51), Expect = 5.5
 Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 11/93 (11%)
 Frame = +2

Query: 602 YKKKASAYDFFKQAAVDPSVLDE------CGLDEETKDVLLANIK-----RKLTSQAVKI 748
           Y +  S +DF     VDP  + E       GL     D++    K     R L S+ + +
Sbjct: 136 YHENGSLFDFLTARCVDPDTMLEMAFSIATGLAHLHMDIVGTRGKPAIAHRDLKSKNILV 195

Query: 749 RADIECACYGYEGIDAVRAALKAGLALSTVDMP 847
           ++++ C C G  G+     A++  +A  TVD P
Sbjct: 196 KSNLTC-CIGDLGL-----AVRHIVATDTVDQP 222


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 994,625
Number of Sequences: 2352
Number of extensions: 17967
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 129572799
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)