Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_B16
         (1151 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

J02645-1|AAA52373.1|  315|Homo sapiens EIF2 protein.                  339   1e-92
BC002513-1|AAH02513.1|  315|Homo sapiens EIF2S1 protein protein.      339   1e-92
U93570-2|AAC51273.1| 1275|Homo sapiens putative p150 protein.          31   5.9  
U93564-2|AAC51263.1| 1275|Homo sapiens putative p150 protein.          31   7.9  

>J02645-1|AAA52373.1|  315|Homo sapiens EIF2 protein.
          Length = 315

 Score =  339 bits (833), Expect = 1e-92
 Identities = 168/255 (65%), Positives = 197/255 (77%), Gaps = 2/255 (0%)
 Frame = +2

Query: 182 MP-LSCRFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLEYNNIEGMXXXXXXXXXXXXXXN 358
           MP LSCRFYQ K+PEVEDVVMVNVRSIAEMGAYV LLEYNNIEGM              N
Sbjct: 1   MPGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSIN 60

Query: 359 KLIRVGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAELLH 538
           KLIR+G+ E VVVIRVDKEKGYIDLSKRRVS E+  KC +++ K+K V SILRHVAE+L 
Sbjct: 61  KLIRIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLE 120

Query: 539 YETSEQLEELYKKTAWYFEEKYKKKA-SAYDFFKQAAVDPSVLDECGLDEETKDVLLANI 715
           Y   EQLE L+++TAW F++KYK+    AYD FK A  DPS+LD   L+E+ ++VL+ NI
Sbjct: 121 YTKDEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDPSILDSLDLNEDEREVLINNI 180

Query: 716 KRKLTSQAVKIRADIECACYGYEGIDAVRAALKAGLALSTVDMPIKINLIAPPLYVMTTS 895
            R+LT QAVKIRADIE ACYGYEGIDAV+ AL+AGL  ST +MPIKINLIAPP YVMTT+
Sbjct: 181 NRRLTPQAVKIRADIEVACYGYEGIDAVKEALRAGLNCSTENMPIKINLIAPPRYVMTTT 240

Query: 896 TPEKTDGLKALQDAI 940
           T E+T+GL  L  A+
Sbjct: 241 TLERTEGLSVLSQAM 255



 Score = 33.5 bits (73), Expect = 1.5
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = +1

Query: 958  IXEAGGVFNIQMAPKVVTATD 1020
            I E  GVFN+QM PKVVT TD
Sbjct: 262  IEEKRGVFNVQMEPKVVTDTD 282


>BC002513-1|AAH02513.1|  315|Homo sapiens EIF2S1 protein protein.
          Length = 315

 Score =  339 bits (833), Expect = 1e-92
 Identities = 168/255 (65%), Positives = 197/255 (77%), Gaps = 2/255 (0%)
 Frame = +2

Query: 182 MP-LSCRFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLEYNNIEGMXXXXXXXXXXXXXXN 358
           MP LSCRFYQ K+PEVEDVVMVNVRSIAEMGAYV LLEYNNIEGM              N
Sbjct: 1   MPGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSIN 60

Query: 359 KLIRVGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAELLH 538
           KLIR+G+ E VVVIRVDKEKGYIDLSKRRVS E+  KC +++ K+K V SILRHVAE+L 
Sbjct: 61  KLIRIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLE 120

Query: 539 YETSEQLEELYKKTAWYFEEKYKKKA-SAYDFFKQAAVDPSVLDECGLDEETKDVLLANI 715
           Y   EQLE L+++TAW F++KYK+    AYD FK A  DPS+LD   L+E+ ++VL+ NI
Sbjct: 121 YTKDEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDPSILDSLDLNEDEREVLINNI 180

Query: 716 KRKLTSQAVKIRADIECACYGYEGIDAVRAALKAGLALSTVDMPIKINLIAPPLYVMTTS 895
            R+LT QAVKIRADIE ACYGYEGIDAV+ AL+AGL  ST +MPIKINLIAPP YVMTT+
Sbjct: 181 NRRLTPQAVKIRADIEVACYGYEGIDAVKEALRAGLNCSTENMPIKINLIAPPRYVMTTT 240

Query: 896 TPEKTDGLKALQDAI 940
           T E+T+GL  L  A+
Sbjct: 241 TLERTEGLSVLSQAM 255



 Score = 33.5 bits (73), Expect = 1.5
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = +1

Query: 958  IXEAGGVFNIQMAPKVVTATD 1020
            I E  GVFN+QM PKVVT TD
Sbjct: 262  IEEKRGVFNVQMEPKVVTDTD 282


>U93570-2|AAC51273.1| 1275|Homo sapiens putative p150 protein.
          Length = 1275

 Score = 31.5 bits (68), Expect = 5.9
 Identities = 19/79 (24%), Positives = 40/79 (50%)
 Frame = +2

Query: 359 KLIRVGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAELLH 538
           K +  GK   +   +  +E+  ID    ++  +++ K  + ++KA     I +  AEL  
Sbjct: 292 KAVCRGKFTALNAYKRKQERSKIDTLTSQL--KELEKQEQTHSKASRRQEITKIRAELKE 349

Query: 539 YETSEQLEELYKKTAWYFE 595
            ET + L+++ +  +W+FE
Sbjct: 350 IETQKTLQKINESRSWFFE 368


>U93564-2|AAC51263.1| 1275|Homo sapiens putative p150 protein.
          Length = 1275

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 19/79 (24%), Positives = 40/79 (50%)
 Frame = +2

Query: 359 KLIRVGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAELLH 538
           K +  GK   +   +  +E+  ID    ++  +++ K  + ++KA     I +  AEL  
Sbjct: 292 KAVCRGKLIALNAYKRKQERSKIDTLTSQL--KELEKQEQTHSKASRRQEITKIRAELKE 349

Query: 539 YETSEQLEELYKKTAWYFE 595
            ET + L+++ +  +W+FE
Sbjct: 350 IETQKTLQKINESRSWFFE 368


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,455,237
Number of Sequences: 237096
Number of extensions: 2459871
Number of successful extensions: 6440
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6432
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16018452930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)