Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_B15
(1142 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI000051A59D Cluster: PREDICTED: similar to Exosome co... 265 1e-69
UniRef50_Q7Q0D9 Cluster: ENSANGP00000011759; n=2; Culicidae|Rep:... 233 5e-60
UniRef50_Q96B26 Cluster: Exosome complex exonuclease RRP43; n=37... 229 1e-58
UniRef50_Q10205 Cluster: Putative exosome complex exonuclease RR... 167 5e-40
UniRef50_Q5KMZ6 Cluster: Opa-interacting protein OIP2, putative;... 166 8e-40
UniRef50_Q8U0M0 Cluster: Probable exosome complex exonuclease 2;... 148 3e-34
UniRef50_Q9ZUI4 Cluster: T2K10.14 protein; n=10; Magnoliophyta|R... 138 2e-31
UniRef50_O26778 Cluster: Probable exosome complex exonuclease 2;... 135 2e-30
UniRef50_A7SQ50 Cluster: Predicted protein; n=1; Nematostella ve... 134 4e-30
UniRef50_A3H8A6 Cluster: 3' exoribonuclease; n=1; Caldivirga maq... 130 5e-29
UniRef50_Q8TGX5 Cluster: Probable exosome complex exonuclease 2;... 129 1e-28
UniRef50_Q06265 Cluster: Exosome complex exonuclease RRP45; n=40... 127 5e-28
UniRef50_Q2NEX4 Cluster: Putative exosome complex, exonuclease 2... 126 8e-28
UniRef50_Q4P345 Cluster: Putative uncharacterized protein; n=1; ... 125 2e-27
UniRef50_A1RXQ5 Cluster: 3' exoribonuclease; n=1; Thermofilum pe... 124 3e-27
UniRef50_Q9UXC0 Cluster: Probable exosome complex exonuclease 2;... 124 3e-27
UniRef50_Q64CA6 Cluster: TRNA nucleotidyltransferase; n=4; envir... 124 4e-27
UniRef50_Q8ZVN0 Cluster: Probable exosome complex exonuclease 2;... 116 9e-25
UniRef50_Q9YC05 Cluster: Probable exosome complex exonuclease 2;... 115 3e-24
UniRef50_Q54CU6 Cluster: Putative uncharacterized protein; n=1; ... 114 3e-24
UniRef50_UPI00015B5DF5 Cluster: PREDICTED: similar to SCL75 prot... 113 6e-24
UniRef50_UPI0000E45C6E Cluster: PREDICTED: similar to SCL75 prot... 109 1e-22
UniRef50_Q6L224 Cluster: Ribonuclease PH; n=2; Thermoplasmatales... 108 3e-22
UniRef50_UPI0000D55D29 Cluster: PREDICTED: similar to Exosome co... 107 4e-22
UniRef50_A5K2Q0 Cluster: Exosome complex exonuclease, putative; ... 107 5e-22
UniRef50_A7DRS4 Cluster: 3' exoribonuclease; n=1; Candidatus Nit... 107 5e-22
UniRef50_Q23PW9 Cluster: 3' exoribonuclease family, domain 1 con... 107 7e-22
UniRef50_Q9M209 Cluster: Nucleolar autoantigen-like protein; n=8... 104 4e-21
UniRef50_Q8ID62 Cluster: Exosome complex exonuclease, putative; ... 100 6e-20
UniRef50_Q15024 Cluster: Exosome complex exonuclease RRP42; n=36... 100 6e-20
UniRef50_UPI0000DB70B0 Cluster: PREDICTED: similar to exosome co... 99 1e-19
UniRef50_O74918 Cluster: Putative exosome complex exonuclease RR... 99 2e-19
UniRef50_A0RXU0 Cluster: RNase PH-related exoribonuclease; n=1; ... 97 6e-19
UniRef50_UPI00006610C8 Cluster: Exosome complex exonuclease RRP4... 97 7e-19
UniRef50_A7AUY6 Cluster: 3' exoribonuclease family, domain 1 con... 93 2e-17
UniRef50_Q8T4A9 Cluster: AT07738p; n=2; Sophophora|Rep: AT07738p... 91 4e-17
UniRef50_UPI0000498B14 Cluster: exosome complex exonuclease; n=1... 91 6e-17
UniRef50_Q55BJ2 Cluster: Putative uncharacterized protein; n=1; ... 90 9e-17
UniRef50_Q05636 Cluster: Exosome complex exonuclease RRP45; n=9;... 90 1e-16
UniRef50_Q20128 Cluster: Putative uncharacterized protein; n=3; ... 89 1e-16
UniRef50_Q6CFB7 Cluster: Yarrowia lipolytica chromosome B of str... 89 2e-16
UniRef50_Q4YPT7 Cluster: Exoribonuclease PH, putative; n=5; Plas... 87 1e-15
UniRef50_Q0ULD2 Cluster: Putative uncharacterized protein; n=1; ... 86 1e-15
UniRef50_UPI0000E49695 Cluster: PREDICTED: hypothetical protein;... 86 2e-15
UniRef50_Q5CYG9 Cluster: RRP45-like archaeo-eukaryotic exosomal ... 86 2e-15
UniRef50_Q7SEX2 Cluster: Putative uncharacterized protein NCU031... 54 3e-15
UniRef50_Q5KKS4 Cluster: Exosome complex exonuclease rrp45, puta... 84 7e-15
UniRef50_Q2TZL0 Cluster: Exosomal 3'-5' exoribonuclease complex;... 81 4e-14
UniRef50_Q29QQ9 Cluster: IP10364p; n=8; Endopterygota|Rep: IP103... 80 1e-13
UniRef50_Q7RZN0 Cluster: Putative uncharacterized protein NCU003... 79 2e-13
UniRef50_A0D7R2 Cluster: Chromosome undetermined scaffold_40, wh... 79 3e-13
UniRef50_Q4UFY0 Cluster: Exosome complex exonuclease, putative; ... 78 4e-13
UniRef50_A2DPV1 Cluster: Nucleolar autoantigen-like protein, put... 77 1e-12
UniRef50_Q5DA97 Cluster: SJCHGC04772 protein; n=1; Schistosoma j... 75 3e-12
UniRef50_Q2QT85 Cluster: 3' exoribonuclease family, domain 1 con... 74 8e-12
UniRef50_A2R0H9 Cluster: Contig An12c0290, complete genome; n=1;... 72 2e-11
UniRef50_Q8MPG3 Cluster: Exosome-associated protein 2; n=3; Tryp... 69 2e-10
UniRef50_Q9SSE1 Cluster: MLP3.20 protein; n=5; core eudicotyledo... 64 6e-09
UniRef50_Q5CZ14 Cluster: RPR45-like archaeo-eukaryotic exosomal ... 64 6e-09
UniRef50_Q59X53 Cluster: Potential exosome component Rrp45p; n=1... 64 9e-09
UniRef50_Q4PFY5 Cluster: Putative uncharacterized protein; n=1; ... 64 9e-09
UniRef50_Q4UI91 Cluster: Exosome ribonuclease PH (Rrp42 homologu... 63 1e-08
UniRef50_A5C744 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_A5DZH2 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_Q4D743 Cluster: Ribosomal RNA processing protein 45, pu... 61 6e-08
UniRef50_A6SAV5 Cluster: Putative uncharacterized protein; n=1; ... 58 3e-07
UniRef50_Q01CP9 Cluster: Exosc8 protein; n=2; Ostreococcus|Rep: ... 58 4e-07
UniRef50_Q5XQ91 Cluster: Putative uncharacterized protein; n=1; ... 57 7e-07
UniRef50_UPI0000E4A2CF Cluster: PREDICTED: similar to Exosc7 pro... 57 1e-06
UniRef50_Q4QBI9 Cluster: Exosome complex exonuclease RRP45 homol... 56 1e-06
UniRef50_Q74ML0 Cluster: NEQ111; n=1; Nanoarchaeum equitans|Rep:... 56 2e-06
UniRef50_Q7QP16 Cluster: GLP_83_5565_6509; n=1; Giardia lamblia ... 55 3e-06
UniRef50_A7ARR1 Cluster: Putative uncharacterized protein; n=1; ... 54 5e-06
UniRef50_A5ATT2 Cluster: Putative uncharacterized protein; n=1; ... 54 7e-06
UniRef50_A2F1P7 Cluster: Putative uncharacterized protein; n=1; ... 54 7e-06
UniRef50_Q00YJ4 Cluster: Exosomal 3'-5' exoribonuclease complex,... 53 2e-05
UniRef50_A3FQP8 Cluster: Exoribonuclease PH, putative; n=2; Cryp... 52 3e-05
UniRef50_A2FQU8 Cluster: Putative uncharacterized protein; n=1; ... 52 3e-05
UniRef50_Q54VM4 Cluster: Putative uncharacterized protein; n=1; ... 50 8e-05
UniRef50_Q6BHU9 Cluster: Similar to sp|P25359 Saccharomyces cere... 49 2e-04
UniRef50_Q5KFI0 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-04
UniRef50_A1DL29 Cluster: 3' exoribonuclease family protein; n=3;... 48 3e-04
UniRef50_O45424 Cluster: Putative uncharacterized protein exos-7... 48 5e-04
UniRef50_A2F1F8 Cluster: Putative uncharacterized protein; n=1; ... 48 6e-04
UniRef50_A1CMV2 Cluster: 3' exoribonuclease family protein; n=5;... 46 0.001
UniRef50_A7RQ94 Cluster: Predicted protein; n=1; Nematostella ve... 33 0.002
UniRef50_Q6L223 Cluster: Ribonuclease PH; n=2; Thermoplasmatales... 44 0.006
UniRef50_Q9UXC2 Cluster: Probable exosome complex exonuclease 1;... 44 0.010
UniRef50_Q4T221 Cluster: Chromosome undetermined SCAF10362, whol... 43 0.017
UniRef50_UPI0000498B51 Cluster: exosome complex exonuclease; n=1... 42 0.030
UniRef50_A2ZJR3 Cluster: Putative uncharacterized protein; n=1; ... 42 0.030
UniRef50_O27290 Cluster: Inosine-5'-monophosphate dehydrogenase ... 41 0.052
UniRef50_Q9SP08 Cluster: Exonuclease RRP41; n=5; Magnoliophyta|R... 41 0.069
UniRef50_Q24GF7 Cluster: 3' exoribonuclease family, domain 1 con... 41 0.069
UniRef50_Q5BWV4 Cluster: SJCHGC04363 protein; n=1; Schistosoma j... 40 0.091
UniRef50_Q74NF6 Cluster: NEQ248; n=1; Nanoarchaeum equitans|Rep:... 40 0.16
UniRef50_Q5CWV7 Cluster: Archeo-eukaryotice exosomal RNAse PH; n... 39 0.28
UniRef50_Q4Q4S6 Cluster: Exosome-associated protein 2, putative;... 39 0.28
UniRef50_Q2H4W8 Cluster: Putative uncharacterized protein; n=1; ... 38 0.37
UniRef50_Q95QG7 Cluster: Putative uncharacterized protein; n=2; ... 37 0.84
UniRef50_Q6CEK7 Cluster: Similar to tr|Q8NKJ5 Saccharomyces cere... 37 1.1
UniRef50_P55995 Cluster: ATP-dependent protease La; n=4; Helicob... 36 2.0
UniRef50_Q6CA11 Cluster: Yarrowia lipolytica chromosome D of str... 36 2.6
UniRef50_A1DFF4 Cluster: Exosome complex endonuclease 1/ribosoma... 36 2.6
UniRef50_O42872 Cluster: Putative exosome complex exonuclease RR... 36 2.6
UniRef50_A7RP27 Cluster: Predicted protein; n=1; Nematostella ve... 35 3.4
UniRef50_Q54EU6 Cluster: Putative uncharacterized protein; n=1; ... 35 4.5
UniRef50_Q5KWI5 Cluster: Ribonuclease PH; n=82; Bacteria|Rep: Ri... 35 4.5
UniRef50_Q9VU20 Cluster: CG11010-PA; n=6; Diptera|Rep: CG11010-P... 34 6.0
UniRef50_UPI00004991B7 Cluster: predicted protein; n=1; Entamoeb... 34 7.9
UniRef50_Q15YM9 Cluster: Peptidase S41; n=2; Alteromonadales|Rep... 34 7.9
UniRef50_Q6CUN6 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 34 7.9
UniRef50_Q3KRU5 Cluster: PKSX1; n=1; Xylaria sp. BCC 1067|Rep: P... 34 7.9
>UniRef50_UPI000051A59D Cluster: PREDICTED: similar to Exosome
complex exonuclease RRP43 (Ribosomal RNA-processing
protein 43) (Exosome component 8) (p9) (Opa-interacting
protein 2); n=3; Endopterygota|Rep: PREDICTED: similar
to Exosome complex exonuclease RRP43 (Ribosomal
RNA-processing protein 43) (Exosome component 8) (p9)
(Opa-interacting protein 2) - Apis mellifera
Length = 281
Score = 265 bits (650), Expect = 1e-69
Identities = 125/256 (48%), Positives = 172/256 (67%)
Frame = +3
Query: 156 MSEVYKLIHPVKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVC 335
M YK+IHPVK+ D+++ R DGR F R I +N++SI AD+SA+ K GNT +VC
Sbjct: 1 MDSQYKIIHPVKYLQDHLAQDVRPDGRQFLSFRPISVNISSITHADSSAIFKIGNTTIVC 60
Query: 336 GIKLELAVPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCID 515
GIK ELAVPKAE P+ G+++ N+ELP LCS K+RPGPPSD AQVI +V I++NS ID
Sbjct: 61 GIKSELAVPKAESPECGYIVPNIELPPLCSPKFRPGPPSDQAQVITKLVENILRNSAAID 120
Query: 516 LKDLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVE 695
LK+LC+ KL WV+YCD+VCI++DGS++DACI AL A+ TL LP + Y+ ET + +
Sbjct: 121 LKELCVYKGKLVWVLYCDLVCINYDGSIIDACIGALTATLNTLTLPEIFYNVETGHVSIN 180
Query: 696 TNERINLKIHGLPVATSFAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGLLCG 875
+ +RI I LPV+ +FA++++ +L+ DPT+ EE +C G L I N+ +C
Sbjct: 181 STKRIRFPIKALPVSITFAIFDN----QLLIADPTDDEESLCLG---KLTIVMNEEKICC 233
Query: 876 IQKXGGGSYXQKIMRK 923
I K GG Q I K
Sbjct: 234 IHKPGGIPISQDIFLK 249
>UniRef50_Q7Q0D9 Cluster: ENSANGP00000011759; n=2; Culicidae|Rep:
ENSANGP00000011759 - Anopheles gambiae str. PEST
Length = 274
Score = 233 bits (571), Expect = 5e-60
Identities = 111/257 (43%), Positives = 165/257 (64%)
Frame = +3
Query: 162 EVYKLIHPVKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGI 341
+ +KL+HPVK++ DY+ R DGR +E R + ++ + IK+AD SA+VK GNT VVCGI
Sbjct: 4 KTFKLLHPVKYYKDYLENNIRPDGRELEELRPLAISFDVIKSADGSAIVKVGNTTVVCGI 63
Query: 342 KLELAVPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLK 521
K ELA P A P GFL+ NV+L + S YRPGPP D AQV + V++ I N++CIDL+
Sbjct: 64 KAELATPNALAPRHGFLVPNVDLSPVSSPSYRPGPPCDEAQVYSQSVADAISNARCIDLQ 123
Query: 522 DLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETN 701
LCI P KL W +YCD+VC+DHDG ++DA IIAL+A+F T+ LP++ Y+++TEE + +T+
Sbjct: 124 QLCISPGKLVWCLYCDLVCLDHDGCVLDAAIIALVAAFHTVKLPTIQYNSDTEETEADTS 183
Query: 702 ERINLKIHGLPVATSFAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGLLCGIQ 881
+ L + +PV TSF + L+ DPT EE++ + L ++ + G +
Sbjct: 184 RLLPLTVDCVPVTTSFVMVAG-----RLIADPTTEEEKLA---STTLTVTVSDGKMSFFN 235
Query: 882 KXGGGSYXQKIMRKX*D 932
+ GG + ++K D
Sbjct: 236 QSGGDPMDSRTLKKCTD 252
>UniRef50_Q96B26 Cluster: Exosome complex exonuclease RRP43; n=37;
Eumetazoa|Rep: Exosome complex exonuclease RRP43 - Homo
sapiens (Human)
Length = 276
Score = 229 bits (560), Expect = 1e-58
Identities = 104/246 (42%), Positives = 158/246 (64%)
Frame = +3
Query: 156 MSEVYKLIHPVKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVC 335
M+ +K + P++++ ++ R DGR E R +N+ SI TAD SA+VK GNT V+C
Sbjct: 1 MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVIC 60
Query: 336 GIKLELAVPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCID 515
G+K E A P + PD G+++ NV+LP LCSS++R GPP + AQV + ++++I+NS+ I
Sbjct: 61 GVKAEFAAPSTDAPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQ 120
Query: 516 LKDLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVE 695
+DLCI P KL WV+YCD++C+D+DG+++DAC AL+A+ K + LP V + ET +V
Sbjct: 121 KEDLCISPGKLVWVLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVN 180
Query: 696 TNERINLKIHGLPVATSFAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGLLCG 875
++ L I PVATSFAV++ +L+ DPT EE + G+ I+ +G LC
Sbjct: 181 LKKKSYLNIRTHPVATSFAVFD----DTLLIVDPTGEEEHL--ATGTLTIVMDEEGKLCC 234
Query: 876 IQKXGG 893
+ K GG
Sbjct: 235 LHKPGG 240
>UniRef50_Q10205 Cluster: Putative exosome complex exonuclease
RRP43; n=1; Schizosaccharomyces pombe|Rep: Putative
exosome complex exonuclease RRP43 - Schizosaccharomyces
pombe (Fission yeast)
Length = 270
Score = 167 bits (406), Expect = 5e-40
Identities = 86/253 (33%), Positives = 152/253 (60%)
Frame = +3
Query: 165 VYKLIHPVKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIK 344
++K I P ++ + ++ R DGR+ E R I +N N I TA+ SA+++ G + VCGIK
Sbjct: 16 IFKKITPEQYLSHLLNQDVRSDGRSVSEFREIVINDNCISTANGSAIIRAGENVFVCGIK 75
Query: 345 LELAVPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKD 524
E+A P P+ G+++ N+EL LCSSK++PGPPSD AQV++ + + ++ S I+L+
Sbjct: 76 AEIAEPFENSPNEGWIVPNLELSPLCSSKFKPGPPSDLAQVVSQELHQTLQQSNLINLQS 135
Query: 525 LCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNE 704
LCI K AWV+Y D++C+++DGS D AL A+ KT+ LP+ +D + E + +
Sbjct: 136 LCIFEKKAAWVLYADIICLNYDGSAFDYAWAALFAALKTVKLPTAVWDEDLERVICASTL 195
Query: 705 RINLKIHGLPVATSFAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGLLCGIQK 884
+++ + S++V++ LL DPT+ EE++ ++++ +K ++ I+
Sbjct: 196 TRPVQLSTEVRSFSWSVFDD-----KLLADPTDEEEDL-STEFLTIMLNSSKNIVKIIKL 249
Query: 885 XGGGSYXQKIMRK 923
GG++ Q ++ K
Sbjct: 250 --GGTHIQPLLLK 260
>UniRef50_Q5KMZ6 Cluster: Opa-interacting protein OIP2, putative;
n=1; Filobasidiella neoformans|Rep: Opa-interacting
protein OIP2, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 297
Score = 166 bits (404), Expect = 8e-40
Identities = 83/217 (38%), Positives = 126/217 (58%), Gaps = 18/217 (8%)
Frame = +3
Query: 165 VYKLIHPVKHFNDYISIKTRLDGRNF------------------DEHRNIKLNVNSIKTA 290
V+K +HP + + ++S R DGR D R + +N SI TA
Sbjct: 27 VFKRLHPASYLSRFLSSGYRPDGRPILPSSSFQSTASASASAADDVWRQVSINTGSISTA 86
Query: 291 DASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVI 470
SA+V+ G+T +VCG+K E+ P AE P GF++ N++LPAL S K++PGPP D AQ
Sbjct: 87 HGSALVRMGDTTMVCGVKAEVGEPDAEAPGEGFVVPNIDLPALSSPKFKPGPPGDEAQTY 146
Query: 471 NNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLL 650
+N + E++ +SK I L L I P K AWV+Y D+VCI++DG+ DA ++A++A+ + L
Sbjct: 147 SNWLYELLVSSKTIPLSSLLIAPGKAAWVLYIDVVCINYDGNAFDAAVLAVMAALRNTRL 206
Query: 651 PSVNYDTETEEIKVETNERINLKIHGLPVATSFAVYE 761
P YD +T+ ER L + +P+A SF ++E
Sbjct: 207 PKAVYDDDTQRTICSRTERYPLSLGRMPLACSFGIFE 243
>UniRef50_Q8U0M0 Cluster: Probable exosome complex exonuclease 2;
n=8; Euryarchaeota|Rep: Probable exosome complex
exonuclease 2 - Pyrococcus furiosus
Length = 277
Score = 148 bits (358), Expect = 3e-34
Identities = 80/229 (34%), Positives = 134/229 (58%)
Frame = +3
Query: 216 KTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLI 395
K R+D R F+++R I++ V I+ A+ SA+VK GNT V+ GIK L P + P++G +
Sbjct: 22 KKRIDDRGFEDYRPIEVEVGVIEKAEGSALVKLGNTQVLVGIKATLGEPFPDTPNMGVMT 81
Query: 396 TNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMV 575
TNVEL L S + PGPP + A + ++ I+ S+ ++L+ + I P K+ VV+ D+
Sbjct: 82 TNVELVPLASPTFEPGPPDERAIELARVIDRGIRESRALNLEKMVIAPGKIVRVVFIDVH 141
Query: 576 CIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNERINLKIHGLPVATSFAV 755
+DHDG+L+DA I IA+ +P V Y+ ET E+++ E+ L + +P++ +FA
Sbjct: 142 VLDHDGNLMDAIGIGAIAALLNARVPKVLYNEETGEVEI-LEEKEPLPVEKIPISVTFAK 200
Query: 756 YEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGLLCGIQKXGGGSY 902
++ L+ DPT EE++ +G I + G + +QK GG++
Sbjct: 201 IGNY-----LVVDPTLEEEQIM--DGRLTITTDETGHISAVQKSEGGAF 242
>UniRef50_Q9ZUI4 Cluster: T2K10.14 protein; n=10; Magnoliophyta|Rep:
T2K10.14 protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 302
Score = 138 bits (334), Expect = 2e-31
Identities = 62/166 (37%), Positives = 102/166 (61%)
Frame = +3
Query: 162 EVYKLIHPVKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGI 341
+ ++ I P++ F ++S R DGR + R+ +N+ + TAD SA+ K G+T ++ I
Sbjct: 17 DAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAI 76
Query: 342 KLELAVPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLK 521
++E+ P + PD G + +P +CS RPG P++ A VI+ +S+ I +S IDLK
Sbjct: 77 RMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLK 136
Query: 522 DLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSV 659
+LC+V K AW+ Y D+ C+D DG+L DA ++A +A+F L +P V
Sbjct: 137 ELCLVSGKAAWMGYLDIYCLDADGALFDAALLAAVAAFSNLQIPIV 182
>UniRef50_O26778 Cluster: Probable exosome complex exonuclease 2;
n=2; Methanobacteriaceae|Rep: Probable exosome complex
exonuclease 2 - Methanobacterium thermoautotrophicum
Length = 271
Score = 135 bits (327), Expect = 2e-30
Identities = 73/236 (30%), Positives = 130/236 (55%)
Frame = +3
Query: 189 KHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKA 368
K D I+ K R+DGR+ E R+I + I A+ S+ VK GNT ++ G+K ++ P
Sbjct: 14 KSITDLINNKERIDGRSLHEFRDISIETGVISKAEGSSRVKLGNTQIIVGVKPQIGEPFP 73
Query: 369 EEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKL 548
+ P++G ++TN EL + S + PGPP + + ++ +V I+ S+ IDL+ LCI+
Sbjct: 74 DTPEMGVILTNSELLPMASPTFEPGPPDERSVELSRVVDRCIRESRMIDLEKLCIIEGSK 133
Query: 549 AWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNERINLKIHG 728
W+++ D+ ID+DG+L DA ++A +A+ +P+ + E E+ + + L ++
Sbjct: 134 VWMLFLDLHIIDYDGNLFDAAVLATVAALLDTRIPAA--EVEDGEVVINREKMQPLPVNR 191
Query: 729 LPVATSFAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGLLCGIQKXGGG 896
+ +FA ++I+L DP+ EE++ S I +G +C +QK G G
Sbjct: 192 KALMCTFA---KIGNEIVL--DPSLEEEDILTARIS--IGVTEEGSICAMQKGGEG 240
>UniRef50_A7SQ50 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 225
Score = 134 bits (324), Expect = 4e-30
Identities = 72/213 (33%), Positives = 121/213 (56%)
Frame = +3
Query: 330 VCGIKLELAVPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKC 509
+C K E A P A+ P+ GF++ NV+LP LCS +RPGPPS++AQV++ + +I
Sbjct: 12 LCFFKKEFAEPAADVPNKGFIVPNVDLPPLCSPSFRPGPPSEHAQVLSTFIDNLITKRSM 71
Query: 510 IDLKDLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIK 689
+L L WV+Y D++C+D+DG++ DA +IA++A+ + L +V + ETE +
Sbjct: 72 ----ELLQHAKYLVWVLYIDLMCLDYDGNVADAAVIAMLAALQNTRLHTVTINEETETPE 127
Query: 690 VETNERINLKIHGLPVATSFAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGLL 869
N+ I+LK+ +PVA +F +++ + DPT+ EE + G S ++ + NK +
Sbjct: 128 PSENKDIHLKLKSMPVAVTFGIFDDDH----IYCDPTDEEERLASGKVSVVMTTNNK--V 181
Query: 870 CGIQKXGGGSYXQKIMRKX*D*LTTPIAXEKXQ 968
+ K GG Q +++ D +TT E Q
Sbjct: 182 VAVHKPGGPPLTQDKLQECFD-VTTGRVLEVQQ 213
>UniRef50_A3H8A6 Cluster: 3' exoribonuclease; n=1; Caldivirga
maquilingensis IC-167|Rep: 3' exoribonuclease -
Caldivirga maquilingensis IC-167
Length = 279
Score = 130 bits (315), Expect = 5e-29
Identities = 69/207 (33%), Positives = 112/207 (54%)
Frame = +3
Query: 207 ISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLG 386
IS R D R R++ + V IKTAD SA+V GNT V+ GIK EL P + P+ G
Sbjct: 21 ISEGKRPDDRQLISMRDLTIRVGVIKTADGSALVNLGNTKVIAGIKFELGKPFEDTPNEG 80
Query: 387 FLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYC 566
LI N+E P L + + PGPP + A I I+ +++S I L+DL I+P K + ++
Sbjct: 81 NLIVNLETPPLAAPTFEPGPPDENAIEIARIIDRALRHSNYIPLRDLVIIPGKSVYSMWV 140
Query: 567 DMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNERINLKIHGLPVATS 746
D+ ++HDG+L+D+ ++A +++ +P D E ++ T +N+ +P+ +
Sbjct: 141 DIYVLNHDGNLIDSSMLAAVSAIANAQVPRAIIDGENVKLDKSTKIPLNINPQNMPLTVT 200
Query: 747 FAVYEHFQSQIILLTDPTNYEEEMCGG 827
+ + + L+ DPT EE M G
Sbjct: 201 YYKIDKY-----LIVDPTLEEEVMSDG 222
>UniRef50_Q8TGX5 Cluster: Probable exosome complex exonuclease 2;
n=9; Archaea|Rep: Probable exosome complex exonuclease 2
- Methanosarcina acetivorans
Length = 266
Score = 129 bits (312), Expect = 1e-28
Identities = 83/246 (33%), Positives = 132/246 (53%)
Frame = +3
Query: 153 KMSEVYKLIHPVKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVV 332
KMSE+ + +N I K R DGR F + R++KL N I A+ SA V GNT V+
Sbjct: 3 KMSEIIATLKKDYIYNLMIKGK-RQDGRGFKDFRDLKLETNVIVKAEGSAKVTLGNTQVL 61
Query: 333 CGIKLELAVPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCI 512
G+KL+ P + D G +ITN+EL + S ++ PGPP + A + +V I+ S I
Sbjct: 62 VGVKLQTGTPFPDSQDEGVIITNLELNPIASPEFEPGPPREEAIEMARVVDRGIRESGAI 121
Query: 513 DLKDLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKV 692
D+K LCI + W+V+ D+ ++ DG+++DA +A IA+ T ++P+ E + +
Sbjct: 122 DIKKLCITVGESVWIVFIDVHVLNDDGNIIDASCLAAIAALMTTMVPN-----EQQGL-- 174
Query: 693 ETNERINLKIHGLPVATSFAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGLLC 872
E + L + +PV + A S+ L+ DP+ EE +C I+S + G +
Sbjct: 175 --GEDVPLAMKEMPVGITIA---KIGSK--LMVDPSLDEEAVC--ETKLTIVSSSDGSVA 225
Query: 873 GIQKXG 890
G+QK G
Sbjct: 226 GMQKMG 231
>UniRef50_Q06265 Cluster: Exosome complex exonuclease RRP45; n=40;
Eumetazoa|Rep: Exosome complex exonuclease RRP45 - Homo
sapiens (Human)
Length = 439
Score = 127 bits (307), Expect = 5e-28
Identities = 78/231 (33%), Positives = 115/231 (49%), Gaps = 2/231 (0%)
Frame = +3
Query: 207 ISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLG 386
I K RLDGR ++RNI++ S T +V+ G T V+ + EL PK G
Sbjct: 18 IEEKKRLDGRQTYDYRNIRI---SFGTDYGCCIVELGKTRVLGQVSCELVSPKLNRATEG 74
Query: 387 FLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYC 566
L N+EL + + + PG SD +N ++ ++NSKCID + LC+V + W +
Sbjct: 75 ILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAGEKVWQIRV 134
Query: 567 DMVCIDHDGSLVDACIIALIASFKTLLLPSVNYD-TETEEIKVETNERINLKIHGLPVAT 743
D+ ++HDG+++DA IA I + P V+ E E + + L IH +P+
Sbjct: 135 DLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEERDPVPLSIHHMPICV 194
Query: 744 SFAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGL-LCGIQKXGG 893
SFA FQ LL DP EE + G L+I+ NK +C IQ GG
Sbjct: 195 SFA---FFQQGTYLLVDPNEREERVMDG---LLVIAMNKHREICTIQSSGG 239
>UniRef50_Q2NEX4 Cluster: Putative exosome complex, exonuclease 2
subunit; n=1; Methanosphaera stadtmanae DSM 3091|Rep:
Putative exosome complex, exonuclease 2 subunit -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 265
Score = 126 bits (305), Expect = 8e-28
Identities = 73/242 (30%), Positives = 123/242 (50%), Gaps = 1/242 (0%)
Frame = +3
Query: 201 DYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPD 380
D ++ R+D R F E+RNI + N I AD SA+V G T V+ G+K ++ P P+
Sbjct: 15 DLLNQGKRIDDRKFSEYRNISIKTNYIGKADGSAMVSIGCTTVIVGVKAQMTTPFNNAPN 74
Query: 381 LGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVV 560
G +ITN EL A+ S + GPP+ +A I+ +V I+ S +DL LC++ +W +
Sbjct: 75 SGIIITNTELLAIASRNFEYGPPNKFAVEISRVVDRAIRESPVVDLDKLCVIEGSKSWKL 134
Query: 561 YCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNERINLKIHGLPVA 740
+ DM +D DG+++DA + I + T +P+ + EI ++ L I +
Sbjct: 135 HIDMYIVDFDGNIMDAACLGAICALLTTKIPTAT--SVNGEIVIDEENLTPLPIKNRSIL 192
Query: 741 TSFAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNK-GLLCGIQKXGGGSYXQKIM 917
+ +Q+I+ DP+ EE + S++ + + G LC +QK G + K +
Sbjct: 193 CTVV---KINNQLIV--DPSKIEEILM---DSSVSFGFREDGSLCALQKCGLNTLTHKEV 244
Query: 918 RK 923
K
Sbjct: 245 TK 246
>UniRef50_Q4P345 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 332
Score = 125 bits (302), Expect = 2e-27
Identities = 57/159 (35%), Positives = 95/159 (59%)
Frame = +3
Query: 156 MSEVYKLIHPVKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVC 335
++ +K + P+ + + ++ R DGR R+ + + SI TAD S+ V+ GNT +
Sbjct: 9 VATTFKRLRPISYLSRFLDASIREDGRPLAAFRDATITLGSISTADGSSFVRIGNTSCIA 68
Query: 336 GIKLELAVPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCID 515
IK E+A P+ P G+LI NVELPA+CSSK++PG P D AQV+ + + ++ +S +D
Sbjct: 69 AIKAEVATPQLSRPREGYLIPNVELPAVCSSKFKPGAPGDEAQVLTSRLLALLNSSNLLD 128
Query: 516 LKDLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIAS 632
+ LCI W +Y D+ I DG+ +DA ++A +++
Sbjct: 129 RQLLCIQDAIAVWCLYLDISFICFDGNAMDAAVLAAVSA 167
Score = 46.0 bits (104), Expect = 0.002
Identities = 26/85 (30%), Positives = 49/85 (57%)
Frame = +3
Query: 594 SLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNERINLKIHGLPVATSFAVYEHFQS 773
SL DA ++ A KT LP+ YD +TE+++ ++ R L + +P A+SF+++E+
Sbjct: 187 SLTDALVLTPTA--KTAKLPAATYDPDTEQVRC-SSSRTALHLEHVPFASSFSIFEN--- 240
Query: 774 QIILLTDPTNYEEEMCGGNGSNLII 848
LL+DPT +E + + + ++
Sbjct: 241 -QYLLSDPTAFESALSSSHATVAVL 264
>UniRef50_A1RXQ5 Cluster: 3' exoribonuclease; n=1; Thermofilum
pendens Hrk 5|Rep: 3' exoribonuclease - Thermofilum
pendens (strain Hrk 5)
Length = 272
Score = 124 bits (300), Expect = 3e-27
Identities = 79/228 (34%), Positives = 118/228 (51%), Gaps = 1/228 (0%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITN 401
RLDGR D++R I+L I AD SA V G+T V+ G+KL + P + P+ G I N
Sbjct: 25 RLDGRKADQYREIRLEKGIIGKADGSARVFLGSTQVIAGVKLAIGTPFPDAPNEGVQIVN 84
Query: 402 VELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMVCI 581
EL + S + PGPP + + +V +++K +DL L I+P W +Y D+ +
Sbjct: 85 AELSPVASPFFEPGPPGEEDIELARVVDRGFRSAKVVDLAKLSIIPSAKCWTLYIDIYPL 144
Query: 582 DHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVET-NERINLKIHGLPVATSFAVY 758
DHDG+LVDA +A + + LP T +E K+ +E+ L I+ L V + A
Sbjct: 145 DHDGNLVDAAGLAALLALLDTKLPR----TSVQENKIAVLDEKDPLPINTLVVYVTVAKI 200
Query: 759 EHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGLLCGIQKXGGGSY 902
+ L+ DPT EEE+ I+ +G +C IQK G GS+
Sbjct: 201 GEY-----LVVDPT-LEEELTADAKITFGIT-ERGEICAIQKSGEGSF 241
>UniRef50_Q9UXC0 Cluster: Probable exosome complex exonuclease 2;
n=5; Sulfolobaceae|Rep: Probable exosome complex
exonuclease 2 - Sulfolobus solfataricus
Length = 275
Score = 124 bits (300), Expect = 3e-27
Identities = 78/228 (34%), Positives = 119/228 (52%), Gaps = 2/228 (0%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITN 401
R DGR ++R + + ++ K AD SA+VK G T+V+ G KLE+ P + P+ G LI N
Sbjct: 28 RQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVN 87
Query: 402 VELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMVCI 581
VEL L + PGPP + A + +V +++SK +DL L I P K W V+ D+ +
Sbjct: 88 VELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVL 147
Query: 582 DHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNERINLKIHGLPVAT-SFAVY 758
D+ G+++DAC +A +A+ + V + + I V NE + PV T S A
Sbjct: 148 DYGGNVLDACTLASVAALYNTKVYKV--EQHSNGISVNKNEVVGKLPLNYPVVTISVAKV 205
Query: 759 EHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGL-LCGIQKXGGGS 899
+ + L+ DP EE + + + SY L + GIQK G GS
Sbjct: 206 DKY-----LVVDPDLDEESIM---DAKISFSYTPDLKIVGIQKSGKGS 245
>UniRef50_Q64CA6 Cluster: TRNA nucleotidyltransferase; n=4;
environmental samples|Rep: TRNA nucleotidyltransferase -
uncultured archaeon GZfos24D9
Length = 260
Score = 124 bits (299), Expect = 4e-27
Identities = 82/241 (34%), Positives = 125/241 (51%), Gaps = 1/241 (0%)
Frame = +3
Query: 201 DYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPD 380
D I R DGR F + R+I + + IK AD S V+ G+T+V+ G+K+E P + P+
Sbjct: 16 DLIEKGKRADGRGFLDFRDIIVERDLIKKADGSTRVQIGDTVVLVGVKVEPGAPFPDTPN 75
Query: 381 LGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVV 560
G L+TN EL L S ++ GPP++ + + +V I+ S+ IDL+ LCI + W+V
Sbjct: 76 KGILMTNAELVPLASPEFESGPPNEDSIELARVVDRGIRGSETIDLEKLCIEEGEKVWMV 135
Query: 561 YCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNERINLKIHGLPVA 740
+ D+ +D+DG+LVDA + I S + +P Y E+ L+I PVA
Sbjct: 136 FIDIHTLDNDGNLVDAAALGAITSLLNVTIPYERYGLTGED---------TLQIRDTPVA 186
Query: 741 TSFAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGLLCGIQKXGG-GSYXQKIM 917
+ V E + LL DP YEE +IS G + G+QK G G +KI+
Sbjct: 187 VT--VVEIGGN---LLVDPNVYEES--AATSKLTVISNADGSISGLQKSGSTGLTEEKIV 239
Query: 918 R 920
+
Sbjct: 240 K 240
>UniRef50_Q8ZVN0 Cluster: Probable exosome complex exonuclease 2;
n=4; Pyrobaculum|Rep: Probable exosome complex
exonuclease 2 - Pyrobaculum aerophilum
Length = 274
Score = 116 bits (280), Expect = 9e-25
Identities = 71/206 (34%), Positives = 114/206 (55%), Gaps = 2/206 (0%)
Frame = +3
Query: 207 ISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLG 386
++ K R+DGR ++ RN+++NV +KTAD SA VK G T VV G+K+ L P + PD G
Sbjct: 24 LATKYRVDGRGPEQTRNVEINVGVVKTADGSAEVKLGKTHVVAGVKVGLGQPFPDAPDEG 83
Query: 387 FLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYC 566
L+ N E+ S GPP ++A + +V I++ +D K L + K A+V++
Sbjct: 84 VLVVNAEVLPHASPYTEVGPPDEFAIELARVVDRGIRHCGYVDFKKLAVEGGK-AYVLWI 142
Query: 567 DMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNER--INLKIHGLPVA 740
D+ I+ DG+L+D +A +A+ K LP V D E +K++ N + + + I P+A
Sbjct: 143 DLYVINDDGNLIDVANLASVAALKNTQLPVVVKD-EAGVVKLDRNNKAPLPVDISKAPIA 201
Query: 741 TSFAVYEHFQSQIILLTDPTNYEEEM 818
S + +L DPT +EEE+
Sbjct: 202 VSVGKIGN-----VLFLDPT-FEEEL 221
>UniRef50_Q9YC05 Cluster: Probable exosome complex exonuclease 2;
n=4; Desulfurococcales|Rep: Probable exosome complex
exonuclease 2 - Aeropyrum pernix
Length = 276
Score = 115 bits (276), Expect = 3e-24
Identities = 72/223 (32%), Positives = 113/223 (50%), Gaps = 1/223 (0%)
Frame = +3
Query: 234 RNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITNVELP 413
R+ RN+K+ I+ A+ SA+VK G T V+ G+K + P + P+ G L + E
Sbjct: 32 RDLKTPRNVKIETGIIEKAEGSALVKLGKTQVIAGVKAGVGAPFKDTPNQGVLTVHAEFV 91
Query: 414 ALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMVCIDHDG 593
L S + PGPP + A + +V ++ +DL+ L I P + WV++ D+ IDHDG
Sbjct: 92 PLASPVFEPGPPDENAIELARVVDRSLREVGAVDLESLVIRPGEKVWVLWVDLYIIDHDG 151
Query: 594 SLVDACIIALIASFKTLLLPSVNYDTETEEIKV-ETNERINLKIHGLPVATSFAVYEHFQ 770
+L DA ++A +A T LP ++ET EI + + E LK+ V + A + +
Sbjct: 152 NLFDASMLATMAVLLTARLPRYE-ESETGEIIISKEGEGEELKVKTRVVTVTTAKIDRY- 209
Query: 771 SQIILLTDPTNYEEEMCGGNGSNLIISYNKGLLCGIQKXGGGS 899
++ DP N EEE + N G + G+QK G GS
Sbjct: 210 ----IVVDP-NIEEEAVSDVRLVTAVDEN-GRIVGLQKTGMGS 246
>UniRef50_Q54CU6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 293
Score = 114 bits (275), Expect = 3e-24
Identities = 68/242 (28%), Positives = 126/242 (52%), Gaps = 9/242 (3%)
Frame = +3
Query: 162 EVYKLIHPVKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGI 341
E ++ IHP++ + Y+ R DGR+ D+ R ++ SI TAD S+ VK G+T VVCG+
Sbjct: 2 EAFQKIHPLEFYRKYLVRSVRPDGRSLDDIRKTTISTGSITTADGSSFVKIGSTSVVCGV 61
Query: 342 KLEL----AVPKAEEPDLGF-----LITNVELPALCSSKYRPGPPSDYAQVINNIVSEII 494
+ E+ ++ K++ L + N+EL +CS+ + PSD A + + ++ +I
Sbjct: 62 RAEVGEKPSIDKSKFSTLNVHENKNIFINIELGPICSNTFSSSKPSDIAMSLCSRLNSLI 121
Query: 495 KNSKCIDLKDLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTE 674
+ + K W +Y D+ C+D+DG++ DA ++++I++ K + LP +
Sbjct: 122 NRLEIPETDYYFDEEGKALWYLYVDVYCLDYDGNIYDAAVLSIISALKNVKLPKGIIENN 181
Query: 675 TEEIKVETNERINLKIHGLPVATSFAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISY 854
E K + + L I + SF+V + + +L DP+ EE++ G + I+Y
Sbjct: 182 DEFYKDLESPQRKLNIQHYLIPLSFSVIDDY-----ILADPSLDEEKLSSG---TINITY 233
Query: 855 NK 860
N+
Sbjct: 234 NE 235
>UniRef50_UPI00015B5DF5 Cluster: PREDICTED: similar to SCL75
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to SCL75 protein - Nasonia vitripennis
Length = 412
Score = 113 bits (273), Expect = 6e-24
Identities = 72/222 (32%), Positives = 108/222 (48%), Gaps = 1/222 (0%)
Frame = +3
Query: 156 MSEVYKLIHPVKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVC 335
M E + I N I TR+DGR E R +K+N T VV G T
Sbjct: 1 MKETFISICEKNFVNKAIQTDTRIDGRTLLEPRPLKINFG---TNWGCCVVSLGQTRAAA 57
Query: 336 GIKLELAVPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCID 515
+ ++ PKA P+ G L NVEL L + + G S+ A +IN + + +K S+C+D
Sbjct: 58 QVSCDIQQPKASRPNEGMLHVNVELNPLAAQHFESGRQSEAAALINRQLEKSLKESRCVD 117
Query: 516 LKDLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVE 695
L+ LCIV DK W + D+ I+HDG+L+D IA +A+ P V E I
Sbjct: 118 LESLCIVADKKVWNIRVDVSIINHDGNLIDCASIAALAALMHFHRPDVTSTGEEVIIHPF 177
Query: 696 T-NERINLKIHGLPVATSFAVYEHFQSQIILLTDPTNYEEEM 818
T + + L ++ PV SF +E+ ++ + DP+ EE +
Sbjct: 178 TEKDPLPLTLYHHPVCISFITFENGKT----VVDPSYLEERV 215
>UniRef50_UPI0000E45C6E Cluster: PREDICTED: similar to SCL75
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to SCL75 protein - Strongylocentrotus
purpuratus
Length = 437
Score = 109 bits (262), Expect = 1e-22
Identities = 64/225 (28%), Positives = 114/225 (50%), Gaps = 2/225 (0%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITN 401
RLDGR ++R K+ + +V G+T ++ + E+ PK P+ G L N
Sbjct: 21 RLDGRQPYDYRRTKIEFGVER---GCCMVHMGDTRILAQVSCEVVEPKENRPNEGQLFVN 77
Query: 402 VELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMVCI 581
+EL + S+ + G SDY +N ++ +K+S+ +D++ LCIV + W + D+ +
Sbjct: 78 LELSPMASTTFEAGRLSDYGIELNRLLERTVKDSRAVDVESLCIVAGEKVWKIRLDVHVL 137
Query: 582 DHDGSLVDACIIALIASFKTLLLPSVNYDTETEEI-KVETNERINLKIHGLPVATSFAVY 758
+HDG+++D+ +A +A+ P V E+ I + + + L +H +PV +FA Y
Sbjct: 138 NHDGNILDSACLAALAALSHFRRPDVTVIGESVTIHSPQDRDPVPLNVHHIPVCVTFAFY 197
Query: 759 EHFQSQIILLTDPTNYEEEMCGGNGSNLIISYN-KGLLCGIQKXG 890
+ LL DPT EE++ G +++ N LC +Q G
Sbjct: 198 HKGKR---LLVDPTEKEEKVMEG---TMVVGMNVHRELCTMQVTG 236
>UniRef50_Q6L224 Cluster: Ribonuclease PH; n=2;
Thermoplasmatales|Rep: Ribonuclease PH - Picrophilus
torridus
Length = 260
Score = 108 bits (259), Expect = 3e-22
Identities = 54/160 (33%), Positives = 89/160 (55%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITN 401
RLDGR ++ R+IK+ N I A SA+V+ G T VV G+K+E P + PD G + N
Sbjct: 26 RLDGRGLNDFRDIKIFENYIPKASGSAMVELGRTKVVAGVKIEEGEPFPDTPDQGVMALN 85
Query: 402 VELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMVCI 581
+E+ + + GPP + A + +V I+ SK ID+ L I P W+V+ D+ I
Sbjct: 86 IEMLPMAFPTFEAGPPGEEAIEYSRVVDRGIRESKMIDVTRLVIEPGTKVWMVFIDIDII 145
Query: 582 DHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETN 701
++ G+++DA IA +A+ + ++P+ E ++ V N
Sbjct: 146 NYAGNIIDASTIAAVAALRNAIVPASRIGGEDFKLPVNAN 185
>UniRef50_UPI0000D55D29 Cluster: PREDICTED: similar to Exosome
complex exonuclease RRP45 (Exosome component 9)
(Polymyositis/scleroderma autoantigen 1) (Autoantigen
PM/Scl 1) (Polymyositis/scleroderma autoantigen 75 kDa)
(PM/Scl-75) (P75 polymyositis-scleroderma overlap
syndrome associated a...; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to Exosome complex exonuclease RRP45
(Exosome component 9) (Polymyositis/scleroderma
autoantigen 1) (Autoantigen PM/Scl 1)
(Polymyositis/scleroderma autoantigen 75 kDa)
(PM/Scl-75) (P75 polymyositis-scleroderma overlap
syndrome associated a... - Tribolium castaneum
Length = 389
Score = 107 bits (258), Expect = 4e-22
Identities = 63/198 (31%), Positives = 101/198 (51%), Gaps = 1/198 (0%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITN 401
RLDGR+FDE R ++L S V GNT V+ E+ PK+ P G L N
Sbjct: 26 RLDGRSFDEFRPLELKFGK---QWGSCYVSLGNTKVLAQTSCEIQQPKSSRPSEGILNIN 82
Query: 402 VELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMVCI 581
+EL L + + G S+ + +N ++ + +K+SK +DL+ LCI ++ W + D+ +
Sbjct: 83 IELNPLAAPHFEAGRQSELSVQLNRLLEKCVKDSKAVDLESLCIKTNEKVWALKVDINVL 142
Query: 582 DHDGSLVDACIIALIASFKTLLLPSVNYDTETEEI-KVETNERINLKIHGLPVATSFAVY 758
+H+G+++D IA++AS P V D E I + + I IH PV ++A+
Sbjct: 143 NHEGNILDCASIAMLASLTHFRRPDVTCDGEEFIIHSYQQRDPIPTVIHHYPVCITYAI- 201
Query: 759 EHFQSQIILLTDPTNYEE 812
F +L DP+ EE
Sbjct: 202 --FNGGEYILADPSLLEE 217
>UniRef50_A5K2Q0 Cluster: Exosome complex exonuclease, putative;
n=4; Plasmodium|Rep: Exosome complex exonuclease,
putative - Plasmodium vivax
Length = 518
Score = 107 bits (257), Expect = 5e-22
Identities = 72/229 (31%), Positives = 116/229 (50%), Gaps = 3/229 (1%)
Frame = +3
Query: 216 KTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLI 395
K RLDGR F++ RNI + + V G+T V+C I E+ P + P+ G +
Sbjct: 18 KLRLDGRKFEDSRNISIYFLG---EHGNVEVSIGHTKVICKITSEIVKPFDKRPNEGIIK 74
Query: 396 TNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMV 575
N+++ + + SD I N++ I+K+S ++L+ LCI+P K W + +++
Sbjct: 75 VNLDIDSFTNVNDN-SQISDECLEIKNLIERILKSSNLLNLESLCIIPHKKVWCLLVNII 133
Query: 576 CIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEI--KVETNERINLKIHGLPVATSF 749
I++DG+L D+C ++ + V D+ I + ETN L IH P+ T+F
Sbjct: 134 VIENDGNLYDSCYLSAYSGLVHYRNNEVTVDSSGNIIIEEGETN-YTPLSIHNTPILTTF 192
Query: 750 AVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNK-GLLCGIQKXGG 893
A +F + I L DP+ +EEE S L ++ NK G L I K GG
Sbjct: 193 A---YFNCEDICLIDPSIHEEEFM---SSKLSVALNKNGKLVSILKPGG 235
>UniRef50_A7DRS4 Cluster: 3' exoribonuclease; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: 3' exoribonuclease -
Candidatus Nitrosopumilus maritimus SCM1
Length = 272
Score = 107 bits (257), Expect = 5e-22
Identities = 71/230 (30%), Positives = 110/230 (47%), Gaps = 1/230 (0%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITN 401
R+DGR DE R + + N+I A+ SA V+ G+T VVCG+K++ P + D G I
Sbjct: 24 RVDGRALDESREVSIETNAIPKANGSARVRLGDTEVVCGVKIQPDRPFPDTGDKGLFICT 83
Query: 402 VELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMVCI 581
EL L GPP + +V I+ S ID+ L I DK V+ D V +
Sbjct: 84 AELLPLSHPTVETGPPGPEVIELARVVDRGIRESHMIDVSQLVIEKDKSVIGVFADNVVV 143
Query: 582 DHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNERINLKIHGLPVATSFA-VY 758
D+DG+L DAC A A+ + P N+ + + VE E +++ I +PV+ + +
Sbjct: 144 DYDGNLFDACSYAATAALLSSKSPKWNWVDDAPAL-VE-GEEVDVPITTIPVSVTMGKIG 201
Query: 759 EHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGLLCGIQKXGGGSYXQ 908
H ++ DP +E + I S + G +C +QK G + Q
Sbjct: 202 NH------IIVDPNG--DEWASMDARITITSDSDGNICALQKGGDDGFTQ 243
>UniRef50_Q23PW9 Cluster: 3' exoribonuclease family, domain 1
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: 3' exoribonuclease family, domain 1 containing
protein - Tetrahymena thermophila SB210
Length = 776
Score = 107 bits (256), Expect = 7e-22
Identities = 70/237 (29%), Positives = 124/237 (52%), Gaps = 3/237 (1%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITN 401
RLDGR + RNIK+ + + ++ G+T ++ E+ PK E+P+ G L N
Sbjct: 466 RLDGRKLMDSRNIKVIFGN-NVGEIEVLI--GDTHIITKTTAEIIQPKQEKPNEGSLKFN 522
Query: 402 VELPALCSSKYRPGPPS--DYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMV 575
V+L ++ + +P + Y+ I ++ +IIK SK ID++ LCIV +K W + D
Sbjct: 523 VDLSSM-QDEQQPNNVNIKKYSNEIQKLLEKIIKGSKAIDMESLCIVTNKRVWSINVDSS 581
Query: 576 CIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNERIN-LKIHGLPVATSFA 752
+ + G+L+DA +++I S P V+ + ++ IK+ T + L IH +P+ +FA
Sbjct: 582 VVSNGGNLIDAIYLSVIISLLHFRKPYVSVEQQS-NIKIHTEKNPQPLSIHHIPIPFTFA 640
Query: 753 VYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGLLCGIQKXGGGSYXQKIMRK 923
F+ +L++DP EE++ G + + YN +C I K GG +++ K
Sbjct: 641 ---FFKKSTLLVSDPLVLEEQIMEGRLTISVNIYND--VCNIHKPGGAPIKLELINK 692
>UniRef50_Q9M209 Cluster: Nucleolar autoantigen-like protein; n=8;
Magnoliophyta|Rep: Nucleolar autoantigen-like protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 438
Score = 104 bits (250), Expect = 4e-21
Identities = 74/262 (28%), Positives = 128/262 (48%), Gaps = 7/262 (2%)
Frame = +3
Query: 153 KMSEVYKL-IHPVKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIV 329
+++ +++L ++ K + + R+DGR ++R KL + K +S V + G T V
Sbjct: 4 RLANMWRLTVNESKFVETALQSELRVDGRGLYDYR--KLTIKFGKEYGSSEV-QLGQTHV 60
Query: 330 VCGIKLELAVPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKC 509
+ + +L P + P+ G L E + + PG P + A + I+ ++ S+
Sbjct: 61 MGFVTAQLVQPYKDRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRA 120
Query: 510 IDLKDLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTET-EEI 686
+D + LC++ K+ W V D+ +D+ G+LVDA IA +A+ T P E +E+
Sbjct: 121 VDTESLCVLAGKMVWSVRIDLHILDNGGNLVDAANIAALAALMTFRRPDCTVGGENGQEV 180
Query: 687 ---KVETNERINLKIHGLPVATSFAVYEHFQSQIILLTDPTNYEEE-MCGGNGSNLIISY 854
+E E + L IH LP+A +F F I++ DPT EE MCG + ++
Sbjct: 181 IIHPLEEREPLPLIIHHLPIAFTFG---FFNKGNIVVMDPTYVEEAVMCG----RMTVTV 233
Query: 855 N-KGLLCGIQKXGGGSYXQKIM 917
N G +C IQK G Q ++
Sbjct: 234 NANGDICAIQKPGEEGVNQSVI 255
>UniRef50_Q8ID62 Cluster: Exosome complex exonuclease, putative;
n=1; Plasmodium falciparum 3D7|Rep: Exosome complex
exonuclease, putative - Plasmodium falciparum (isolate
3D7)
Length = 477
Score = 100 bits (240), Expect = 6e-20
Identities = 73/240 (30%), Positives = 111/240 (46%), Gaps = 4/240 (1%)
Frame = +3
Query: 186 VKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPK 365
V HF I RLDGR F++ RN+ +N +K + G T V+C I E+ P
Sbjct: 8 VNHFWKNIKKNIRLDGRTFEDSRNVCINF--LKDY-GHVEISIGFTKVICKITSEIVKPH 64
Query: 366 AEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDK 545
+ G L N+++ SD I NI+ ++K S I+ + LCI+P K
Sbjct: 65 DRKLKEGILKINLDIDNFIEDNENSDNMSDECLEIKNIIDRVLKTSNIINFESLCIIPGK 124
Query: 546 LAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNERIN---L 716
W + +++ I++DG+L DAC ++ V + +I ++ E IN L
Sbjct: 125 KVWCICINIMVIENDGNLTDACYLSAYCGLVHFKNHQVRV-IKNGDIIID-KEEINYSPL 182
Query: 717 KIHGLPVATSFAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNK-GLLCGIQKXGG 893
I P+ T+FA YE + L DP +EEE S + I+ NK G L + K GG
Sbjct: 183 SILNSPIVTTFAYYEEHD---VCLIDPCLHEEEFM---SSKISIALNKNGNLISLLKPGG 236
>UniRef50_Q15024 Cluster: Exosome complex exonuclease RRP42; n=36;
Eumetazoa|Rep: Exosome complex exonuclease RRP42 - Homo
sapiens (Human)
Length = 291
Score = 100 bits (240), Expect = 6e-20
Identities = 67/233 (28%), Positives = 115/233 (49%), Gaps = 7/233 (3%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITN 401
R+DGR +++R +++ + + SA VK G+T ++ G+K E+ PK E+P+ G+L
Sbjct: 23 RVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILVGVKAEMGTPKLEKPNEGYLEFF 82
Query: 402 VELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMVCI 581
V+ A + ++ D I N + I N +DLK LCI P + WV+Y D++ +
Sbjct: 83 VDCSASATPEFEGRGGDDLGTEIANTLYRIFNNKSSVDLKTLCISPREHCWVLYVDVLLL 142
Query: 582 DHDGSLVDACIIALIASFKTLLLPSVNYDTETE-----EIKVETNERINLKIHGLPVATS 746
+ G+L DA IA+ A+ +P V + E E+ + + I L + +P +
Sbjct: 143 ECGGNLFDAISIAVKAALFNTRIPRVRVLEDEEGSKDIELSDDPYDCIRLSVENVPCIVT 202
Query: 747 FAV--YEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGLLCGIQKXGGGS 899
Y H + D T +EE C S L+ +KG++ ++K G GS
Sbjct: 203 LCKIGYRH-------VVDAT-LQEEAC-SLASLLVSVTSKGVVTCMRKVGKGS 246
>UniRef50_UPI0000DB70B0 Cluster: PREDICTED: similar to exosome
component 9; n=1; Apis mellifera|Rep: PREDICTED: similar
to exosome component 9 - Apis mellifera
Length = 396
Score = 99 bits (238), Expect = 1e-19
Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 2/212 (0%)
Frame = +3
Query: 189 KHF-NDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPK 365
K+F N + RLDGR+ E R +K+ S S +V G T V+ + ++ PK
Sbjct: 11 KNFVNKSVEQGIRLDGRSLLEARPVKIYFASNW---GSCMVLLGQTRVIAQVTCDIQQPK 67
Query: 366 AEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDK 545
P+ G L NVEL + + + G S+ + +I+ + + ++SKCIDL+ LCI+ DK
Sbjct: 68 TSRPNEGMLHINVELNPMAAQHFDSGRQSEISILISRQLEKCYQDSKCIDLESLCIIADK 127
Query: 546 LAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEI-KVETNERINLKI 722
W + D+ I+HDG+L+D IA +A+ P V + E + + + L +
Sbjct: 128 KVWNLRVDINVINHDGNLIDCASIATLAALSHFHRPDVTSNGEDIIVHPFSEKDPLPLTL 187
Query: 723 HGLPVATSFAVYEHFQSQIILLTDPTNYEEEM 818
+ PV SF +E + + DPT EE +
Sbjct: 188 YHYPVCVSFITFESGNT----VMDPTYLEERI 215
>UniRef50_O74918 Cluster: Putative exosome complex exonuclease
RRP45; n=1; Schizosaccharomyces pombe|Rep: Putative
exosome complex exonuclease RRP45 - Schizosaccharomyces
pombe (Fission yeast)
Length = 291
Score = 99.1 bits (236), Expect = 2e-19
Identities = 66/226 (29%), Positives = 108/226 (47%), Gaps = 2/226 (0%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITN 401
RLDGR + R++++ V G+T V+ I E+ P + P G
Sbjct: 24 RLDGRQLSDFRSLEIQFGK---EYGQVDVSFGHTRVMARITTEITKPYTDRPFDGIFSIT 80
Query: 402 VELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMVCI 581
EL L S + G SD VI+ ++ + ++ S +D + LCI+ + W V + I
Sbjct: 81 TELTPLAYSAFEAGRVSDQEIVISRLIEKAVRRSNALDTESLCIISGQKCWHVRASVHFI 140
Query: 582 DHDGSLVDACIIALIASFKTLLLPSVNYDTETEEI-KVETNERINLKIHGLPVATSFAVY 758
+HDG+LVDA IA+IA+ P + E + VE + L I +P+ +F+ +
Sbjct: 141 NHDGNLVDAACIAVIAALCHFRRPELTVVGEEVTVHPVEERVPVPLSILHMPICVTFSFF 200
Query: 759 EHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGL-LCGIQKXGG 893
+ + I+ D T EE++C G ++ I+ NK +C I K GG
Sbjct: 201 NNGELAIV---DATLEEEDLCNG---SMTITLNKNREVCQIYKAGG 240
>UniRef50_A0RXU0 Cluster: RNase PH-related exoribonuclease; n=1;
Cenarchaeum symbiosum|Rep: RNase PH-related
exoribonuclease - Cenarchaeum symbiosum
Length = 270
Score = 97.5 bits (232), Expect = 6e-19
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 1/228 (0%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITN 401
R+DGR DE R + + N+I A+ SA V G T VV G+K++ P + D G I
Sbjct: 24 RIDGRRLDEPRKLTIETNAIPKAEGSARVHLGRTDVVTGVKVQPDRPFPDVGDRGIFICT 83
Query: 402 VELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMVCI 581
E+ L GPPS + +V I+ S +DL L ++ DK ++ D I
Sbjct: 84 AEILPLAHPDVETGPPSPAVIELARVVDRGIRESGMVDLSKLVLLKDKSVIGIFADSSVI 143
Query: 582 DHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNERINLKIHGLPVATSFA-VY 758
D DG+L DAC A A+ T LP E +++E + + +PV+ + A +
Sbjct: 144 DVDGNLFDACSYAATAAILTAKLPKWEIQDEA-PVRIEGETPV--PVTTIPVSVTMAKIN 200
Query: 759 EHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGLLCGIQKXGGGSY 902
H +L DP ++E + I + + G +C +QK G +
Sbjct: 201 GH------ILVDPN--QDEWAVMDARITITTNSDGNICALQKGGNSGF 240
>UniRef50_UPI00006610C8 Cluster: Exosome complex exonuclease RRP45
(EC 3.1.13.-) (Exosome component 9)
(Polymyositis/scleroderma autoantigen 1) (Autoantigen
PM/Scl 1) (Polymyositis/scleroderma autoantigen 75 kDa)
(PM/Scl-75) (P75 polymyositis-scleroderma overlap
syndrome-associated autoa; n=1; Takifugu rubripes|Rep:
Exosome complex exonuclease RRP45 (EC 3.1.13.-) (Exosome
component 9) (Polymyositis/scleroderma autoantigen 1)
(Autoantigen PM/Scl 1) (Polymyositis/scleroderma
autoantigen 75 kDa) (PM/Scl-75) (P75
polymyositis-scleroderma overlap syndrome-associated
autoa - Takifugu rubripes
Length = 336
Score = 97.1 bits (231), Expect = 7e-19
Identities = 56/163 (34%), Positives = 86/163 (52%), Gaps = 1/163 (0%)
Frame = +3
Query: 207 ISIKTRLDGRNFDEHRNIKLNVNSIKTAD-ASAVVKCGNTIVVCGIKLELAVPKAEEPDL 383
I+ K RLDGR ++R IK++ AD V+ G T V+ + EL PK P+
Sbjct: 18 IAEKKRLDGRQTYDYRRIKVSFG----ADYGCCFVELGETRVMAQVSCELVAPKESRPNE 73
Query: 384 GFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVY 563
G L N+EL + S + G S+ + +N + ++NSKCID + LC+V + W +
Sbjct: 74 GILFFNIELSPMASPAFEAGRQSELSVKLNRQLERCLRNSKCIDTESLCVVSGEKVWQIR 133
Query: 564 CDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKV 692
D+ ++HDG+L+DA IA I + P V+ + EEI V
Sbjct: 134 VDVHLLNHDGNLMDAASIAAITALSHFRRPDVS--SVGEEITV 174
>UniRef50_A7AUY6 Cluster: 3' exoribonuclease family, domain 1
containing protein; n=1; Babesia bovis|Rep: 3'
exoribonuclease family, domain 1 containing protein -
Babesia bovis
Length = 196
Score = 92.7 bits (220), Expect = 2e-17
Identities = 52/166 (31%), Positives = 85/166 (51%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITN 401
RLDGR + R K++V + + +V G+TIV + E+ P E P G + +
Sbjct: 34 RLDGRTSIQPR--KIHVEQLANP-GNVIVSLGDTIVFVAVSSEIVPPNVEHPTEGIVTFS 90
Query: 402 VELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMVCI 581
VEL +CS Y PG SD Q I+ + +I K+S ID++ LCIV K W + ++ +
Sbjct: 91 VELSPMCSLNYEPGKASDVEQEISYAIEKIYKDSGIIDVESLCIVSRKHVWCLRVNIHIL 150
Query: 582 DHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNERINLK 719
+DG+L+DA IA+ + + P + + + ++ N LK
Sbjct: 151 QNDGNLLDATNIAVFKALMSYRKPDTQLNGDGMRLDLDANYSSTLK 196
>UniRef50_Q8T4A9 Cluster: AT07738p; n=2; Sophophora|Rep: AT07738p -
Drosophila melanogaster (Fruit fly)
Length = 412
Score = 91.5 bits (217), Expect = 4e-17
Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 2/225 (0%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITN 401
RLDGR +E R+++L S V G+T V+ + E+ P P+ G + N
Sbjct: 29 RLDGRRSNESRDVELTFGKDW---GSVAVSMGDTKVLAQVTCEMGPPALSRPNEGKIHLN 85
Query: 402 VELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMVCI 581
V L + + +N+++ ++S+ IDL+ LC+ +K W + ++ +
Sbjct: 86 VYLGGVAFLDEAHTTHDQRSLKLNSLLERTFRSSRSIDLESLCVAVEKHVWCIRVNVNVL 145
Query: 582 DHDGSLVDACIIALIASFKTLLLPSVNY-DTETEEIKVETNERINLKIHGLPVATSFAVY 758
+HDG+L DA IA +A+ P V Y D E K + E I L H PV+ ++ VY
Sbjct: 146 NHDGNLYDASTIATLAALMHFRRPDVWYKDGELRIFKKKEREFIPLLFHHYPVSVTYCVY 205
Query: 759 EHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNK-GLLCGIQKXG 890
+S + + DPT EE S +++S+N LC + G
Sbjct: 206 ---KSSVQPILDPTLLEENAA---DSVIVLSFNSFQELCSLTAGG 244
>UniRef50_UPI0000498B14 Cluster: exosome complex exonuclease; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: exosome complex
exonuclease - Entamoeba histolytica HM-1:IMSS
Length = 265
Score = 90.6 bits (215), Expect = 6e-17
Identities = 69/249 (27%), Positives = 119/249 (47%), Gaps = 5/249 (2%)
Frame = +3
Query: 186 VKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPK 365
+ + I R DGR + R IK I A+ S + G T VV G+K EL P
Sbjct: 9 INFIKEGIKTNIRTDGRANIQFREIKCEKGVIDQANGSVRLCLGKTEVVVGVKCELGEPS 68
Query: 366 AEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDK 545
P+ G V+ +S+ D I ++ ++N+ L++LC++ K
Sbjct: 69 VLTPESGRYNVLVKQVGTMTSR-------DVE--IEKMILVSLENAGKDMLQELCVLKGK 119
Query: 546 LAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNY---DTETEEIKVETN--ERI 710
L W++Y D+V ++ DG+++D +A+ A+ L+P VN D++T ++ ++ + +
Sbjct: 120 LCWIIYVDVVVVEDDGNVMDCTGLAVRAALLNTLIPIVNVISGDSDTVQVDIDKDNVQFK 179
Query: 711 NLKIHGLPVATSFAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGLLCGIQKXG 890
K +P+ S F+ + I DP+ EE+ C G+ I+ N G +CGIQK G
Sbjct: 180 KFKPESVPLCVSLI---QFEKEFI--ADPSKVEEK-CNGSEITTAITSN-GKVCGIQKGG 232
Query: 891 GGSYXQKIM 917
G + + M
Sbjct: 233 NGCFKTEEM 241
>UniRef50_Q55BJ2 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 526
Score = 90.2 bits (214), Expect = 9e-17
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 1/227 (0%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITN 401
R+DGR ++ R IK+ + V+ G T V I ++ PK E P+ GF I N
Sbjct: 22 RIDGRGVNDMRAIKIEFGK---SYGVVEVQLGKTRVFTAITCDIVEPKPERPNEGFYIFN 78
Query: 402 VELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMVCI 581
++ + S P+ + I+ + +K+S+ ID + LCI+ W + + +
Sbjct: 79 TDISPMSSVSVNVNQPNPMESELGRIIEKGLKDSRAIDTEALCIISGSKVWSIKIAIHVL 138
Query: 582 DHDGSLVDACIIALIASFKTLLLPSVNYDTETEEI-KVETNERINLKIHGLPVATSFAVY 758
D G+L+D I+++ + P V I ++ E + L IH P++ +F
Sbjct: 139 DDCGNLLDCASISVMTALIHFRKPDVTVIGNDATIHSLDEREPVPLSIHHTPISITFG-- 196
Query: 759 EHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGLLCGIQKXGGGS 899
F I++ DP EE + G S + + + +CG+ K GG S
Sbjct: 197 --FFPNEIMIVDPDTKEESVMDGKLSFFVNIHKE--ICGVSKGGGTS 239
>UniRef50_Q05636 Cluster: Exosome complex exonuclease RRP45; n=9;
Saccharomycetales|Rep: Exosome complex exonuclease RRP45
- Saccharomyces cerevisiae (Baker's yeast)
Length = 305
Score = 89.8 bits (213), Expect = 1e-16
Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 2/181 (1%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITN 401
RLDGR+FD+ R++++ + D S VK GNT V C I ++A P + P G + +
Sbjct: 24 RLDGRSFDQFRDVEITFGK-EFGDVS--VKMGNTKVHCRISCQIAQPYEDRPFEGLFVIS 80
Query: 402 VELPALCSSKYRPGPPSDYAQVI-NNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMVC 578
E+ + S++ G + +V+ + I+ + ++ S +D++ LCIV W V D+
Sbjct: 81 TEISPMAGSQFENGNITGEDEVLCSRIIEKSVRRSGALDVEGLCIVAGSKCWAVRADVHF 140
Query: 579 IDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEI-KVETNERINLKIHGLPVATSFAV 755
+D DG +DA IA++A P + E + V E + L I +P+ +F+
Sbjct: 141 LDCDGGFIDASCIAVMAGLMHFKKPDITVHGEQIIVHPVNEREPVPLGILHIPICVTFSF 200
Query: 756 Y 758
+
Sbjct: 201 F 201
>UniRef50_Q20128 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 434
Score = 89.4 bits (212), Expect = 1e-16
Identities = 58/219 (26%), Positives = 110/219 (50%), Gaps = 1/219 (0%)
Frame = +3
Query: 207 ISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLG 386
+ I R D R+ +E R++KL V + +A+ GNT V+ + E+A P + P G
Sbjct: 18 LKIGKRFDFRSLEEFRDVKLVVGA---EVGTAICTIGNTKVMAAVSAEIAEPSSMRPHKG 74
Query: 387 FLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYC 566
+ +V+L + + + ++ II++S+CID++ LCI K W +
Sbjct: 75 VINIDVDLSPMANYANEHDRLGSKGMELIRLLELIIRDSRCIDVEALCIRAGKEIWKIRV 134
Query: 567 DMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNER-INLKIHGLPVAT 743
D+ +D DGSL+D +A I + + P+V + I E + + L I+ +P+ T
Sbjct: 135 DVRILDEDGSLLDCACLAAITALQHFRRPNVTLEPHHTLIYSEYEKAPVPLNIYHMPICT 194
Query: 744 SFAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNK 860
+ + + + QI+++ DPT+ E G +++++ NK
Sbjct: 195 TIGLLD--KGQIVVI-DPTDKETACLDG---SIVVACNK 227
>UniRef50_Q6CFB7 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 299
Score = 89.0 bits (211), Expect = 2e-16
Identities = 62/249 (24%), Positives = 114/249 (45%), Gaps = 8/249 (3%)
Frame = +3
Query: 177 IHPVKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELA 356
I+ K + + + RLDGR+ +E R +++ S + G T VV I E+
Sbjct: 4 INDRKFLTEALKVSKRLDGRSMEEQRPMEVTFGS---QFGHVELTMGKTKVVVRISAEIT 60
Query: 357 VPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIV 536
P P G + + ++ ++ S + S+ +I+ +V + ++ S +DL+ LCIV
Sbjct: 61 KPNERRPFEGIFVVHTDIGSMASPIFENNHQSEQEIMISQVVEKAVRRSGALDLESLCIV 120
Query: 537 PDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEI-KVETNERIN 713
K W + D+ +D DG LVDA A++A P V+ D + +E +
Sbjct: 121 AGKKCWEIRADVHYLDFDGGLVDATCAAVMAGLYHFKKPDVDVDGGAVTVCDMEERHPVA 180
Query: 714 LKIHGLPVATSFAVYE------HFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGL-LC 872
L + LPV+ ++ ++E + ++ + D T E ++ + + I+ NK +C
Sbjct: 181 LSVLHLPVSVTYGLFELKNDETNEVEKVECVLDCTAIERQV---QNAEITITINKNRDIC 237
Query: 873 GIQKXGGGS 899
I K G S
Sbjct: 238 QISKPSGVS 246
>UniRef50_Q4YPT7 Cluster: Exoribonuclease PH, putative; n=5;
Plasmodium|Rep: Exoribonuclease PH, putative -
Plasmodium berghei
Length = 281
Score = 86.6 bits (205), Expect = 1e-15
Identities = 49/175 (28%), Positives = 94/175 (53%), Gaps = 1/175 (0%)
Frame = +3
Query: 186 VKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPK 365
+K+ + I+ R+DGR +R I++N + + +AD S+ V V+CGIKL L P+
Sbjct: 4 LKYIEEGINSNIRVDGRTLLTYRTIEINKSILVSADGSSSVMNEENNVICGIKLSLLPPE 63
Query: 366 AEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEI-IKNSKCIDLKDLCIVPD 542
D GF+ ++ PA +S ++ Q++ +I+ ++ IKN+ ID K LC++P
Sbjct: 64 QHSIDEGFVNLQIDCPASVASN---RIKKEHLQIMTSIIYDLCIKNN--IDKKKLCVLPS 118
Query: 543 KLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNER 707
K W + +++ ++ G L+D IA+ + + +P V + +E+ + N +
Sbjct: 119 KFVWGIDINVMVLNGGGGLLDIISIAIYVALNDMNIPVVKAPKKIDELNMFHNTK 173
>UniRef50_Q0ULD2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 368
Score = 86.2 bits (204), Expect = 1e-15
Identities = 80/276 (28%), Positives = 133/276 (48%), Gaps = 43/276 (15%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELA----VP--------- 362
R + R+ R +N S+ A+ SAVV+ GNT VVCG++ E+ +P
Sbjct: 75 RANARSAHAFRRPGINTGSLTHANGSAVVRLGNTSVVCGVRAEILKEADIPGTNDFSSAI 134
Query: 363 ------KAEEPD-LGFLITNVELPALCSSKYRPG-PPSDYAQVINNIVSEIIKNSKCIDL 518
AEE D L ++ NVEL + + PG PS +AQ + + ++ +S+ +
Sbjct: 135 DSEDGDDAEEIDTLRLVVPNVELSTGSTPNHIPGNAPSTFAQSLITRMRSLLVSSRLLRA 194
Query: 519 KDLCIV-------------PDKLA---WVVYCDMVCIDHDGSLVDACIIALIASFKTLLL 650
+DL I+ P + WV+Y D+ I DGS DA ++L+A+ + L
Sbjct: 195 RDLRILYTPSANTEDVDEEPQTVVKGYWVLYIDVFFISIDGSAFDAAWLSLLAALRDTKL 254
Query: 651 PSVNYDTETEEIKVETN--ERINLKIHGLPVATSFAVYE---HFQSQI-ILLTDPTNYEE 812
P +D E E I + E L++ GLPV +FAV+E + + +L+DP +EE
Sbjct: 255 PRAWFDEEFEGILCSDDPVEAKTLELRGLPVPATFAVFEGKSEDEGDVQWVLSDPDAFEE 314
Query: 813 EMCGGNGSNLIISYNKGLLCGIQKXGGGSYXQKIMR 920
+C ++ + + G + I+K GGG ++ M+
Sbjct: 315 GVC---RESVCVVVDGGKVLRIEKSGGGVVGRQAMK 347
>UniRef50_UPI0000E49695 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 336
Score = 85.8 bits (203), Expect = 2e-15
Identities = 44/144 (30%), Positives = 73/144 (50%)
Frame = +3
Query: 201 DYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPD 380
D+ R DGR +RN +L + SA +K NT V+ G+K E+ P P
Sbjct: 156 DFTRDDLRSDGRTCLSYRNFELECGVVSNTSGSARLKLSNTQVLVGVKAEMGPPNPLNPS 215
Query: 381 LGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVV 560
G + V+ A S K+ + A I+N++ + KN K +D K LC++ + W +
Sbjct: 216 RGGIEFFVDFSANASPKFAGRGGDELAAEISNMLGLVYKNKKMLDYKSLCVIAGQCVWTL 275
Query: 561 YCDMVCIDHDGSLVDACIIALIAS 632
Y D+V ++ G+L+DA +A+ A+
Sbjct: 276 YADIVVLECGGNLLDAIALAVKAA 299
>UniRef50_Q5CYG9 Cluster: RRP45-like archaeo-eukaryotic exosomal
rnase, PH domain; n=2; Cryptosporidium|Rep: RRP45-like
archaeo-eukaryotic exosomal rnase, PH domain -
Cryptosporidium parvum Iowa II
Length = 432
Score = 85.8 bits (203), Expect = 2e-15
Identities = 76/279 (27%), Positives = 127/279 (45%), Gaps = 23/279 (8%)
Frame = +3
Query: 126 IFKFISHTFKMSEVYKLIHPVKHFNDYISIKT---RLDGRNFDEHRNIKLNVNSIKTADA 296
IF I + K +++ I +K +S++ RLDGR +E+RN+K+N+N
Sbjct: 5 IFYKIDNNCKCKKLF--IKSIKMDTFIVSVREYGLRLDGRTMNEYRNVKINLNKNY---G 59
Query: 297 SAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITNVELPALC----SSKYRPGPPSDYAQ 464
V G T V+ +K EL P E GF+ V++ L S +R +
Sbjct: 60 EVEVNIGRTHVLSVVKSELVAPSQERSSEGFISFTVDIGPLSINPTSHAFRHNRTT-LGT 118
Query: 465 VINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTL 644
I N + I+K + ID + LCI+ W V C++ + DG+L DAC++A ++ K
Sbjct: 119 EIANYIERILKETGAIDTEILCILSGVCVWSVKCEIHVLFDDGNLFDACLMATLSGLKHY 178
Query: 645 LLPSVNYDTETEEIKVE---------------TNERINLKIHGLPVATSFAVYEHFQSQI 779
++ D+ ++ K E E I +H P++ S Y + + +
Sbjct: 179 RYNEIDVDSFLKKSKCEGFGERDYQRLENTIRKLEMIPFNVHHFPLSISIG-YINGKEGL 237
Query: 780 ILLTDPTNYEEEMCGGNGSNLIISYN-KGLLCGIQKXGG 893
+ DP + EE + + + + IS N K +CGI K GG
Sbjct: 238 SYIVDPNSDEESI---SDTIIHISINDKQEVCGISKFGG 273
>UniRef50_Q7SEX2 Cluster: Putative uncharacterized protein
NCU03159.1; n=6; Fungi/Metazoa group|Rep: Putative
uncharacterized protein NCU03159.1 - Neurospora crassa
Length = 357
Score = 54.0 bits (124), Expect(2) = 3e-15
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
Frame = +3
Query: 543 KLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNE--RINL 716
K WV+Y D++ + DG+ DA A++A+ + LP +D + E + +E ++ L
Sbjct: 199 KAYWVLYIDLLFVSFDGNPFDAAWTAVMAALRDTKLPQARWDPDREAVVCSRSEEAKMAL 258
Query: 717 KIHGLPVATSFAVY---EHFQ---------SQIILLTDPTNYEEEMCGGNGSNLI-ISYN 857
+ GLPVA + V+ EH + S+ +L DP EE +C + ++ S
Sbjct: 259 DVRGLPVACTATVFLEKEHGEDSGSSAERKSRHWILLDPDRLEESLCKETVTVVVDCSGE 318
Query: 858 KGLLCGIQKXGGGSYXQKIMR 920
+ + I+K GG +++MR
Sbjct: 319 ETKVKSIEKHGGTVIGRELMR 339
Score = 51.6 bits (118), Expect(2) = 3e-15
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 24/126 (19%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELA----VP--KAEEPDL 383
R +GR E R + ++ +S+ A+ SA+V+ G+T VVCG++ E+ +P + EP
Sbjct: 38 RTNGRAPHEARPVHIHTSSLAHANGSALVRTGDTTVVCGVRAEILPVTNIPQYRPREPSY 97
Query: 384 G-----------------FLITNVELPALCSSKYRPG-PPSDYAQVINNIVSEIIKNSKC 509
G L+ N+EL C+ ++ PG PP+ AQ ++ + ++ + K
Sbjct: 98 GEEDNDDSADVDELKDYDLLVPNIELATGCAPQFLPGVPPTTLAQTLSTRIYSLLHSCKV 157
Query: 510 IDLKDL 527
+D K L
Sbjct: 158 VDPKGL 163
>UniRef50_Q5KKS4 Cluster: Exosome complex exonuclease rrp45,
putative; n=1; Filobasidiella neoformans|Rep: Exosome
complex exonuclease rrp45, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 281
Score = 83.8 bits (198), Expect = 7e-15
Identities = 59/245 (24%), Positives = 115/245 (46%), Gaps = 6/245 (2%)
Frame = +3
Query: 177 IHPVKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKC--GNTIVVCGIKLE 350
I P N+++ + +G+ D +++ D V+C G T ++ +
Sbjct: 5 IDPPSVQNEFL-LAALAEGKRLDGRLPLQMRDVHYIFGDELGCVECRLGKTAILAQVSAT 63
Query: 351 LAVPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLC 530
+ P+ + P GFL+ N E+ + SS Y G P D +I ++ + I+ ++ ID + LC
Sbjct: 64 IVKPRDDRPYEGFLLINSEIGPMASSVYENGRPGDDEVMIGRLLEKSIRRTEAIDREALC 123
Query: 531 IVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNER- 707
I+ + W + + + G+L+D +A +A+ K P V + +E+ + + E
Sbjct: 124 ILAGEKVWQLRLTLHFLSDSGNLLDCAALAGMAALKHFRKPDV--EVIGDEVIIHSPEER 181
Query: 708 --INLKIHGLPVATSFAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYN-KGLLCGI 878
+ L IH P+ +FA +E+ + DP++ E +C G L ++ N + +C +
Sbjct: 182 APVPLAIHHTPLCLTFAYFENLPP----ILDPSHVEMMLCSG---TLTLTLNAQREICVL 234
Query: 879 QKXGG 893
K GG
Sbjct: 235 SKAGG 239
>UniRef50_Q2TZL0 Cluster: Exosomal 3'-5' exoribonuclease complex;
n=8; Eurotiomycetidae|Rep: Exosomal 3'-5'
exoribonuclease complex - Aspergillus oryzae
Length = 292
Score = 81.4 bits (192), Expect = 4e-14
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 2/226 (0%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITN 401
RLDGR D+ R LNV S V+ G T ++ I E+ P + P G
Sbjct: 24 RLDGRQADQFR--PLNV-SFGEEYGHVKVQLGKTSLIVRISSEVTKPHDDRPFDGIFTIA 80
Query: 402 VELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMVCI 581
+EL A+ S + G D ++N++ +I++S +D + LC++ W V D+
Sbjct: 81 LELTAMGSPAWENGRQGDLETYVSNVLDRVIRHSNALDTESLCVLKGVSCWNVRADVHIT 140
Query: 582 DHDGSLVDACIIALIASFKTLLLP-SVNYDTETEEIKVETNERINLKIHGLPVATSFAVY 758
++DG+L+DA I ++A + P +V D + V+ + L I P++ +F +
Sbjct: 141 NYDGNLIDAACIGVMAGLQHFRRPDAVVKDGQVIVYGVDERVPVALNITHKPLSVTFHTF 200
Query: 759 EHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNK-GLLCGIQKXGG 893
+ + I+ D T EE+ + +++++ N G +C + K G
Sbjct: 201 DEGKRVIV---DATRKEEQ---ASEADVVMGLNNAGDVCYLSKFSG 240
>UniRef50_Q29QQ9 Cluster: IP10364p; n=8; Endopterygota|Rep: IP10364p
- Drosophila melanogaster (Fruit fly)
Length = 296
Score = 79.8 bits (188), Expect = 1e-13
Identities = 60/240 (25%), Positives = 109/240 (45%), Gaps = 7/240 (2%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITN 401
R DGR+ ++R + L + A SA ++ NT ++ G+K E+ VP P+ G L
Sbjct: 23 RCDGRSRRDYRPMDLETGLVSNASGSARLRLANTDILVGVKTEIDVPNPLTPEFGKLEFF 82
Query: 402 VELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMVCI 581
V+ A + ++ SD AQ + + ++ + + LC++P + W +Y D++ +
Sbjct: 83 VDCSANATPEFEGRGGSDLAQELILSLQNAYESPLAFNYRTLCLIPGQQCWKLYIDILIL 142
Query: 582 DHDGSLVDACIIALIASFKTLLLPSVN---YDTETEEIKVETN--ERINLKIHGLPVATS 746
+ G+L DA +A A+ LP V D ++ + N + + I +P+ +
Sbjct: 143 ECGGNLHDAVSLAAKAALFNTKLPRVTATMLDAGITDLIISDNPYDCTRIGIETVPLLVT 202
Query: 747 FAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKG--LLCGIQKXGGGSYXQKIMR 920
+ +L DP + EEE+C + +S G L G GGG+ + MR
Sbjct: 203 VCKIGDY-----VLVDP-SAEEEVCSTVSMVVSVSMRNGQAFLSGTHLTGGGAMHRDTMR 256
>UniRef50_Q7RZN0 Cluster: Putative uncharacterized protein
NCU00334.1; n=7; Pezizomycotina|Rep: Putative
uncharacterized protein NCU00334.1 - Neurospora crassa
Length = 297
Score = 79.4 bits (187), Expect = 2e-13
Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 2/226 (0%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITN 401
RLDGR FD++R ++L A V G T ++ E+ VP A+ P G
Sbjct: 25 RLDGREFDQYRPLELTFGD---EYGVANVSLGKTKILAKASAEVTVPFADRPLDGIFTIA 81
Query: 402 VELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMVCI 581
EL + + + P++ +++ ++ + ++ S +D + LC+V + W V D+ +
Sbjct: 82 TELSPMAAPHFEVNRPTETEVLLSRLLEKTVRRSGALDTESLCLVAGQKCWSVRVDVHVL 141
Query: 582 DHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVET-NERINLKIHGLPVATSFAVY 758
HDG+L DA A++A+ + P + + + E + L P +++ +
Sbjct: 142 SHDGNLTDAACFAVVAALRHFRKPDTSMENGVLTVYTPAEREPVPLGWLHSPFCVTWSFF 201
Query: 759 EHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNK-GLLCGIQKXGG 893
+ + LL D EE++ +++ IS N+ G +C I K GG
Sbjct: 202 GE-EGETALL-DADWMEEQV---RVASVTISLNRHGEICQIAKLGG 242
>UniRef50_A0D7R2 Cluster: Chromosome undetermined scaffold_40, whole
genome shotgun sequence; n=4; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_40, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 984
Score = 78.6 bits (185), Expect = 3e-13
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 4/230 (1%)
Frame = +3
Query: 138 ISHTFKMSEVYKLIHPVKHFN---DYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVV 308
I H ++Y I P+K+F + +++ R+DGR+ + R I+ + T + +
Sbjct: 754 IKHKKYNYKIYLFIKPLKNFEFVLEQLTLGKRIDGRDPLQLRMIQSHFGPQITG--AVEL 811
Query: 309 KCGNTIVVCGIKLELAVPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSE 488
G T V P P GFL +++L L + Y P I + +
Sbjct: 812 SLGETSV------SRMSPNPIRPSEGFLKFHLDLQVLRDTGYMHNPIK-LDMEIEKYIEK 864
Query: 489 IIKNSKCIDLKDLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYD 668
+IK SK +D + LCI+ K W + ++ I++DG+L+DA + I S + P V+
Sbjct: 865 VIKGSKALDTESLCILSGKNVWSIDVNVALINNDGNLLDAMYLCCIFSQQHFRRPQVS-- 922
Query: 669 TETEEIKVETNER-INLKIHGLPVATSFAVYEHFQSQIILLTDPTNYEEE 815
+ +KVE +R + L IH +P++ + A+ E Q ILL D EE+
Sbjct: 923 VSLQGVKVEVEKRLVPLSIHHIPLSLTQAILE-LNEQTILLQDSCLEEED 971
>UniRef50_Q4UFY0 Cluster: Exosome complex exonuclease, putative;
n=2; Theileria|Rep: Exosome complex exonuclease,
putative - Theileria annulata
Length = 322
Score = 78.2 bits (184), Expect = 4e-13
Identities = 56/233 (24%), Positives = 108/233 (46%), Gaps = 10/233 (4%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITN 401
R+DGR+ D + + ++ + ++++ GNT++ + E+ P +E P+ GFL N
Sbjct: 33 RIDGRSLDSYLYVSVDFDG---PPGNSLISFGNTVIFTCVSQEIVEPNSERPNEGFLFFN 89
Query: 402 VELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMVCI 581
VE + S Y PG +D + + + K S C+DL+ LCI K + + +
Sbjct: 90 VET-SFTSECYEPGKTTDQEHNLIYFLENMFKESSCLDLETLCITSGKQVLALRVYVHVL 148
Query: 582 DHDGSLVDACIIALIASFKTLLLPSVNYDTETE-EIKVETNERINLKIHGLPVATSFAVY 758
DG+L+ AC + +AS P + E ++ L I+ +P+ + +
Sbjct: 149 QDDGNLLSACSFSALASLLHYRKPLMELSDELNYSFYGLWHKGTPLNIYHVPILVTVWLL 208
Query: 759 E--------HFQSQIILLTDPTNYEEEMCGGNGSNLIISYNK-GLLCGIQKXG 890
E H S+ + +P ++E+++ + +II +N+ G + I K G
Sbjct: 209 ETRDHSFLDHNSSEYTFVLEPNSFEQKLL---KTQIIILFNQFGEVLWIYKNG 258
>UniRef50_A2DPV1 Cluster: Nucleolar autoantigen-like protein,
putative; n=1; Trichomonas vaginalis G3|Rep: Nucleolar
autoantigen-like protein, putative - Trichomonas
vaginalis G3
Length = 315
Score = 76.6 bits (180), Expect = 1e-12
Identities = 64/244 (26%), Positives = 111/244 (45%)
Frame = +3
Query: 186 VKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPK 365
++ + +S R DGR+ +E R + ++ +D +A+VK G+TIV C + +
Sbjct: 14 IRSTREMLSNGLRPDGRDPNEPRRL-----TVDFSDGAAIVKLGSTIVSCRVIKNQVLAD 68
Query: 366 AEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDK 545
P+ GF + S +R A+ +N V ++ K + +DL+ L I K
Sbjct: 69 ENHPNQGFFSIGLSSTHKIDSYFR-------AETLN-AVRDMFKMNNALDLESLVIQIGK 120
Query: 546 LAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNERINLKIH 725
L W + C++V +++DG L +A +A+ LPS D +L +H
Sbjct: 121 LVWELKCEIVILENDGGLFEAMTLAVGCGLLATKLPSTRGDR-------------SLTLH 167
Query: 726 GLPVATSFAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGLLCGIQKXGGGSYX 905
LP+ +FA+ + Q DPT E C +G I + +G +C I+K GG +
Sbjct: 168 HLPIPITFALID----QRTRFVDPTVLEALAC--DGFLTICANAQGEICSIRKNGGVTLP 221
Query: 906 QKIM 917
+M
Sbjct: 222 STVM 225
>UniRef50_Q5DA97 Cluster: SJCHGC04772 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04772 protein - Schistosoma
japonicum (Blood fluke)
Length = 277
Score = 74.9 bits (176), Expect = 3e-12
Identities = 39/142 (27%), Positives = 74/142 (52%)
Frame = +3
Query: 207 ISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLG 386
I + R+DGR E+R +++ N + A SA ++ G T +VC +K+E+ P + G
Sbjct: 18 IEVGCRMDGRGPSEYRPLEIETNILSHATGSASIRIGETFIVCCVKMEVGKPSLTRLNEG 77
Query: 387 FLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYC 566
+ NVE + + S+ A+ + + + S+ I+L LCI + WV+Y
Sbjct: 78 RIEINVECYPTATYRCNEKGASELAERLKTTLQSTYQ-SEFINLNSLCIQRGRQCWVIYI 136
Query: 567 DMVCIDHDGSLVDACIIALIAS 632
D++ ++ G+L+DA + + A+
Sbjct: 137 DLLILEGAGNLLDASSLVIKAA 158
>UniRef50_Q2QT85 Cluster: 3' exoribonuclease family, domain 1
containing protein, expressed; n=2; Oryza sativa
(japonica cultivar-group)|Rep: 3' exoribonuclease
family, domain 1 containing protein, expressed - Oryza
sativa subsp. japonica (Rice)
Length = 284
Score = 73.7 bits (173), Expect = 8e-12
Identities = 66/256 (25%), Positives = 107/256 (41%), Gaps = 13/256 (5%)
Frame = +3
Query: 189 KHF-NDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPK 365
KHF I+ R DGR + R I + I A+ SA V+ G T V+ +K EL P
Sbjct: 9 KHFIRGGIAQDLRTDGRRRLQFRAISVETGVIPQANGSARVRLGATEVIATVKAELGKPS 68
Query: 366 AEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSK-----CIDLKDLC 530
PD G + V+ + + +++ + + + K IDL L
Sbjct: 69 ILHPDKGKVSIFVDCSPTAAPMFEGRGSEEFSAELCVALQRCLLGGKSGAGAAIDLSSLI 128
Query: 531 IVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYD-----TETEEIKVE 695
+V K+ W +Y D + + DG+L+DA A+ + +P VN E E+ V
Sbjct: 129 VVDGKVCWDLYIDGLVVSSDGNLLDALAAAIKVALSDTGIPKVNVSLSATTDEEPEVNVS 188
Query: 696 TNERINLKIHGLPV-ATSFAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNK-GLL 869
E + +PV T V +H+ + D T+ EE S + +S N+ G +
Sbjct: 189 DEEFLQFDTSSVPVIVTLTKVGKHY------IVDATSEEESQM---SSAVSVSVNRHGQI 239
Query: 870 CGIQKXGGGSYXQKIM 917
G+ K GG ++
Sbjct: 240 RGLTKRGGAGLDPSVI 255
>UniRef50_A2R0H9 Cluster: Contig An12c0290, complete genome; n=1;
Aspergillus niger|Rep: Contig An12c0290, complete genome
- Aspergillus niger
Length = 285
Score = 72.1 bits (169), Expect = 2e-11
Identities = 51/176 (28%), Positives = 86/176 (48%), Gaps = 5/176 (2%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEE--PDLGFLI 395
R +GR + R N S+ + SAVV+ G T VCG E+ P+ E L L+
Sbjct: 44 RANGRAPSQFRVTSANTGSLTHTNGSAVVRVGGTTAVCGDDAEVEDPEDETHIQQLNLLV 103
Query: 396 TNVELPALCSSKYRPG-PPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDM 572
N+ L C+ + PG PPS AQ +++ + ++ ++K K++ K WV+Y D+
Sbjct: 104 PNLSLSTGCAPGFVPGAPPSALAQSLSHKILNLLHSTKL--EKEI-----KAFWVLYIDI 156
Query: 573 VCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVE--TNERINLKIHGLP 734
+ I G+ DA +++A+ + LP +D + E + +E L + GLP
Sbjct: 157 MIISLAGNPFDAAWASVLAALRDTKLPRAWWDVDNEMVVCSDAVSESQKLSLRGLP 212
>UniRef50_Q8MPG3 Cluster: Exosome-associated protein 2; n=3;
Trypanosoma|Rep: Exosome-associated protein 2 -
Trypanosoma brucei
Length = 294
Score = 69.3 bits (162), Expect = 2e-10
Identities = 66/242 (27%), Positives = 110/242 (45%), Gaps = 4/242 (1%)
Frame = +3
Query: 189 KHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADA--SAVVKCGNT--IVVCGIKLELA 356
+H + ++ RLDGR D R + +S K D ++ + NT + C +
Sbjct: 17 QHVHQFLVQNKRLDGRPLDALREPHILRDS-KGGDGLLASTLYTDNTGMCLNCTVSGVFG 75
Query: 357 VPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIV 536
P +++PD G L +V P S + +V + S II C+DL +L I+
Sbjct: 76 PPPSDQPDEGRLTVDVAAPFF-QSHSTDQVAAALREVARFVRSTIIS---CMDLTELNII 131
Query: 537 PDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNERINL 716
+ WV+ ++V ++ DG L A + A++A+ +LLP E VE+ L
Sbjct: 132 NGEACWVLQVELVILNADGGLRAAALHAVVAAIHNMLLPRSRLPNGDE---VESR---RL 185
Query: 717 KIHGLPVATSFAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGLLCGIQKXGGG 896
+ H +PVA + VY+ S + L D TN EE +++S G++ +Q G
Sbjct: 186 RFHTIPVAVTIGVYKLGASGVRFLMD-TNAAEESVVDGLLTVVLSDENGIITFVQ---SG 241
Query: 897 SY 902
SY
Sbjct: 242 SY 243
>UniRef50_Q9SSE1 Cluster: MLP3.20 protein; n=5; core
eudicotyledons|Rep: MLP3.20 protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 297
Score = 64.1 bits (149), Expect = 6e-09
Identities = 66/255 (25%), Positives = 104/255 (40%), Gaps = 23/255 (9%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITN 401
R DGR +R I + I A+ SA V+ G T V+ +K E+ P + +PD G +
Sbjct: 20 RTDGRKRLTYRPIYVETGVIPQANGSARVRIGGTDVIASVKAEIGRPSSLQPDKGKVAVF 79
Query: 402 VELPALCSSKY--RPGPP--SDYAQVINNIVS------------EIIKNSKCIDLKDLCI 533
++ + R G S+ A + + ++ I+L L I
Sbjct: 80 IDCSPTAEPTFGGRGGEELSSELALALQRCLLGGKSGAGLQSSIHVLVPGAGINLSSLLI 139
Query: 534 VPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNY-----DTETEEIKVET 698
K+ W +Y D + I DG+L+DA A+ A+ +P VN D E EI +
Sbjct: 140 KEGKVCWDLYIDGLVISSDGNLLDALGAAIKAALTNTAIPKVNVSAEVADDEQPEIDISD 199
Query: 699 NERINLKIHGLPV-ATSFAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNK-GLLC 872
E + +PV T V H+ + D T EE S + IS N+ G +C
Sbjct: 200 EEYLQFDTSSVPVIVTLTKVGTHY------IVDATAEEESQM---SSAVSISVNRTGHIC 250
Query: 873 GIQKXGGGSYXQKIM 917
G+ K G ++
Sbjct: 251 GLTKRSGSGLDPSVI 265
>UniRef50_Q5CZ14 Cluster: RPR45-like archaeo-eukaryotic exosomal
RNAse PH; n=2; Cryptosporidium|Rep: RPR45-like
archaeo-eukaryotic exosomal RNAse PH - Cryptosporidium
parvum Iowa II
Length = 291
Score = 64.1 bits (149), Expect = 6e-09
Identities = 44/169 (26%), Positives = 88/169 (52%), Gaps = 10/169 (5%)
Frame = +3
Query: 177 IHPVKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAV-VKCGNTIVVCGIKLEL 353
+ P ++ N ++ R DGR + RN KL +N + +++ AV V+ GN+ + ++
Sbjct: 9 LRPDEYLNRFLEQGVRCDGRKPEVCRNFKLELNELSSSNYGAVSVRIGNSSYIACCSPQI 68
Query: 354 AVPKAEEPDLGFLITN------VELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCID 515
+ + + ITN +ELP +C P +++ ++N ++E + +S+ I+
Sbjct: 69 -IHTGLDQESNNAITNTRINVSLELPTICGFTGNP----NHSNFVSNSITECLNDSRIIN 123
Query: 516 LKDLCIVP---DKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLP 653
K+ I +L W++ +VC+ +DG+ +D +IA IAS + +LP
Sbjct: 124 -KEAFITKFQGKELHWLIDIKVVCLSYDGNPLDYTLIASIASLRNTILP 171
>UniRef50_Q59X53 Cluster: Potential exosome component Rrp45p; n=1;
Candida albicans|Rep: Potential exosome component Rrp45p
- Candida albicans (Yeast)
Length = 337
Score = 63.7 bits (148), Expect = 9e-09
Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 7/181 (3%)
Frame = +3
Query: 138 ISHTFKMSEVYKLIHPVKHFNDYISIKTRLDG-RNFDEHRNIKLNVNSIKTADASAVVKC 314
+S +++ LI +K N +S T G R F++ R I + +++ T S +
Sbjct: 1 MSKELSLNQKNYLIQALKS-NIRLSTSTNTGGSRKFNQFRPIDIKLSN--TRYGSVELSL 57
Query: 315 GNTIVVCGIKLELAVPKAEEPDLGFLITNVELP------ALCSSKYRPGPPSDYAQVINN 476
G T V+ I + P + P G + N E+P + ++ ++ +IN
Sbjct: 58 GKTKVMVNITSRITEPYQDRPFEGIMTINCEIPNHIKLQSNDTTNNNNDNEDEFINLINR 117
Query: 477 IVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPS 656
+ I+ S +DL++LCI+ + W + D+ +++DG+L+D+ +A+I + P
Sbjct: 118 ALDRAIRRSNAVDLENLCIIAGEKVWELIIDLQVLNYDGNLIDSGCLAIITALLDFKKPD 177
Query: 657 V 659
V
Sbjct: 178 V 178
>UniRef50_Q4PFY5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 327
Score = 63.7 bits (148), Expect = 9e-09
Identities = 40/197 (20%), Positives = 93/197 (47%), Gaps = 8/197 (4%)
Frame = +3
Query: 207 ISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLG 386
+S R DGR+F R++ ++ + + + +K G + C ++ L P+++ P G
Sbjct: 21 LSDGVRPDGRSFLSTRDVDISFGE-ELGNCTVAIK-GTRVSTC-VRATLMPPRSDRPYEG 77
Query: 387 FLITNVELPALCSSKYRP--GPPSDYAQ----VINNIVSEIIKNSKCIDLKDLCIVPDKL 548
FL ++ + +Y G + A+ + + ++ + ++ ++ +D + LC+V +
Sbjct: 78 FLQITTDISPMAGIEYDSTGGGANSSARAREVLFDRLIDKAVRRTEAVDREALCVVAGEQ 137
Query: 549 AWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNER--INLKI 722
W V+ + + G+ +DA ++ + S + P + + + +ER + L I
Sbjct: 138 VWNVHLTVHLLSDTGAALDAAVLCSMLSLRHFRRPDYSIENGNQVRLYSLDERVPVPLAI 197
Query: 723 HGLPVATSFAVYEHFQS 773
H P+ +FA++ H S
Sbjct: 198 HHTPLCVTFAIFNHLPS 214
>UniRef50_Q4UI91 Cluster: Exosome ribonuclease PH (Rrp42 homologue),
putative; n=2; Theileria|Rep: Exosome ribonuclease PH
(Rrp42 homologue), putative - Theileria annulata
Length = 268
Score = 62.9 bits (146), Expect = 1e-08
Identities = 43/172 (25%), Positives = 80/172 (46%)
Frame = +3
Query: 207 ISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLG 386
IS RLDGR F++ ++ + N A S+ V G+ IV + + P+ PD G
Sbjct: 8 ISSNLRLDGRKFEQLYSLNIIPNISSIAHGSSQVTFGDNIVQTTVNFSIVSPEDSTPDEG 67
Query: 387 FLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYC 566
+ + + + +Y +++ NI+ ++ +DLK LCI+P +L W +
Sbjct: 68 IIDLTITGTNIFENSELS--QRNY-EILCNILYDLEFQHAFLDLKSLCILPGQLCWNIRI 124
Query: 567 DMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNERINLKI 722
+ G ++DA I +++S +P V E +E+ +R NL++
Sbjct: 125 HSTVVKRGGCVIDALSIGVLSSLMCSDVPDVEVMFRDE---LESYQRSNLQL 173
>UniRef50_A5C744 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 674
Score = 62.5 bits (145), Expect = 2e-08
Identities = 32/79 (40%), Positives = 47/79 (59%)
Frame = +3
Query: 378 DLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWV 557
D G + V +P +CS RPG P + A ++ +S+ I +S I+LK+L +V K AW+
Sbjct: 368 DGGSIAIEVCMPPICSPLVRPGRPVEEAPFVSKQLSDAILSSSMINLKELSLVSGKAAWM 427
Query: 558 VYCDMVCIDHDGSLVDACI 614
Y D+ C+D GSL DA I
Sbjct: 428 AYLDVYCLDAYGSL-DAAI 445
>UniRef50_A5DZH2 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 341
Score = 62.5 bits (145), Expect = 2e-08
Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 3/161 (1%)
Frame = +3
Query: 156 MSEVYKLIHPVKHF-NDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVV 332
MS +L KHF + + + RL+GR+ + R+I + ++ T V G+T +
Sbjct: 1 MSRHVELTANEKHFLHTALKSQLRLNGRSLMQLRDISIYLSP--TEYGYVEVSFGSTKLS 58
Query: 333 CGIKLELAVPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQV-INNIVSEIIKNSKC 509
I + P + P G + N E+ + S K+ +V I+ I+ + I+ S
Sbjct: 59 VRISASITKPYEDRPFEGIFVINSEISPMASLKFDTTRSQQQDEVLISRIIEKSIRRSNA 118
Query: 510 IDLKDLCIVPDKLAWVVYCDMVCIDHDGSLVD-ACIIALIA 629
+DL++LCI+ + W + D+ ++DG ++D C ++A
Sbjct: 119 LDLENLCIIAGEQCWEITADLNFWNYDGGMIDIGCFATMLA 159
>UniRef50_Q4D743 Cluster: Ribosomal RNA processing protein 45,
putative; n=2; Trypanosoma cruzi|Rep: Ribosomal RNA
processing protein 45, putative - Trypanosoma cruzi
Length = 334
Score = 60.9 bits (141), Expect = 6e-08
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 2/180 (1%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITN 401
R D R + R + ++ + + D S V +CG TIV I EL P P G + +
Sbjct: 33 RPDQRGAQQLREVNVDF-PLLSRDVSCV-RCGGTIVTAAIACELVEPFPYRPKHGIIDFS 90
Query: 402 VELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMVCI 581
V P ++ + + + + +IK +D + LC++P + W + D+ +
Sbjct: 91 VRQPY---TERDSSAKTAELKKLTAFLERLIKGGGVVDTEGLCVLPGRRVWSISVDVTVL 147
Query: 582 DHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNER--INLKIHGLPVATSFAV 755
+ +G++ D + A +A P + ++ I T+ER + L IH P++ SFA+
Sbjct: 148 NDEGNVTDVAVWATVAVLLHYRRPELTIRGDS-VILHPTHERDPVPLSIHHTPLSFSFAI 206
>UniRef50_A6SAV5 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 189
Score = 58.4 bits (135), Expect = 3e-07
Identities = 34/135 (25%), Positives = 70/135 (51%), Gaps = 9/135 (6%)
Frame = +3
Query: 543 KLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNERIN--L 716
K W +Y D++ I DG+ +DA A++++ + + LP ++D + E I + ++ L
Sbjct: 36 KAFWTLYIDILFISLDGNPLDAAWAAVVSALRNVRLPKAHWDADREMILCDDEVSLSKKL 95
Query: 717 KIHGLPVATSFAVYEHFQ------SQIILLTDPTNYEEEMCGGNGSNLI-ISYNKGLLCG 875
+ GLP+A +F V+ + + +L DP +EE +C + + ++ +K + G
Sbjct: 96 TLRGLPIAATFLVFRAKEQKRGKDKKFWILADPDTFEEGLCDESITMVVDCKADKPKILG 155
Query: 876 IQKXGGGSYXQKIMR 920
+ K GG + + M+
Sbjct: 156 LSKVGGTTVGKDEMK 170
>UniRef50_Q01CP9 Cluster: Exosc8 protein; n=2; Ostreococcus|Rep:
Exosc8 protein - Ostreococcus tauri
Length = 294
Score = 58.0 bits (134), Expect = 4e-07
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Frame = +3
Query: 435 RPGPPSDYAQVINNIVSEIIKNSKCI--DLKDLCIVPDKLAWVVYCDMVCIDHDGSLVDA 608
RPG SD A+ V + + +++ + DL DLCI AW + D+V +D DG+ DA
Sbjct: 101 RPGRESDKAEACAARVRDALTSAEVLGSDLSDLCIERGVFAWRLMLDVVVLDDDGAAADA 160
Query: 609 CIIALIASFKTLLLPSVNYD-----TETEEIKVE-----TNERINLKIHGLPVATSFAVY 758
+ A +A+ + ++LP EE V+ + L + PV + A+Y
Sbjct: 161 ALSAAVAALRDVVLPEATVKRGKIVIGDEEEGVDGADDGMRKGTPLNVRTTPVCLTTALY 220
Query: 759 -EHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGLLCGIQKXGG 893
EH LL DPT+ EE + S ++ G++ G+ K GG
Sbjct: 221 KEH------LLVDPTHAEEALSECEVS--VVLTEDGMIRGVFKNGG 258
>UniRef50_Q5XQ91 Cluster: Putative uncharacterized protein; n=1;
uncultured archaeon GZfos26D8|Rep: Putative
uncharacterized protein - uncultured archaeon GZfos26D8
Length = 208
Score = 57.2 bits (132), Expect = 7e-07
Identities = 46/128 (35%), Positives = 58/128 (45%)
Frame = -2
Query: 607 ASTRLPSWSIHTISQYTTHANLSGTMQRSFRSMHLEFLIISDTILFITCA*SEGGPGLYL 428
AS RLP S IS T H ++ RS+ + + T L S GGP L
Sbjct: 71 ASARLPLSSNTCISIKTIHTFSPSSIHNLSRSIVSDPRMPRSTTLASCMLFSFGGPDSNL 130
Query: 427 EEHKAGSSTFVIKKPKSGSSAFGTANSSFIPHTTIVLPHLTTADASAVFMELTFNFMFRC 248
+ + SS FVI P SG S G +S+F P T V P T A+ SA F+ + R
Sbjct: 131 GDARGTSSAFVIITPLSGVSGKGVPSSTFTPTKTSVSPIFTRAEPSARFITSRSTLISRY 190
Query: 247 SSKFLPSS 224
S LPSS
Sbjct: 191 SRNPLPSS 198
>UniRef50_UPI0000E4A2CF Cluster: PREDICTED: similar to Exosc7
protein, partial; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to Exosc7 protein,
partial - Strongylocentrotus purpuratus
Length = 209
Score = 56.8 bits (131), Expect = 1e-06
Identities = 41/142 (28%), Positives = 75/142 (52%), Gaps = 6/142 (4%)
Frame = +3
Query: 492 IKNSKCIDLKDLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLP--SVNY 665
+ N++ +D K LC++ + W +Y D+V ++ G+L+DA +A+ A+ +P +V+
Sbjct: 34 LSNTQMLDYKSLCVIAGQCVWTLYADIVVLECGGNLLDAIALAVKAALYNTRIPLVTVHK 93
Query: 666 DTE-TEEIKVETN--ERINLKIHGLPVATSFAVYEHFQSQIILLTDPTNYEEEMCGGNGS 836
D + TE+I V +N + + L LPV + + + D T EEE C + +
Sbjct: 94 DMDGTEDIDVSSNPHDFVTLDTKNLPVLVTVTMVGSGH-----IVDAT-LEEEAC--SMA 145
Query: 837 NLIISYNK-GLLCGIQKXGGGS 899
++ + NK G + G+ K G GS
Sbjct: 146 CIVAAVNKEGAIDGMVKKGSGS 167
>UniRef50_Q4QBI9 Cluster: Exosome complex exonuclease RRP45 homolog,
putative; n=3; Leishmania|Rep: Exosome complex
exonuclease RRP45 homolog, putative - Leishmania major
Length = 363
Score = 56.4 bits (130), Expect = 1e-06
Identities = 37/152 (24%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Frame = +3
Query: 306 VKCGNTIVVCGIKLELAVPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVS 485
VKCGNT+ I +L P P GF V L + + P S + I+ ++
Sbjct: 57 VKCGNTVATATISCDLVEPSPYRPKHGFF--EVHARQLLNER-DPLDQSKEIKRISMYLT 113
Query: 486 EIIKNSKCIDLKDLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNY 665
++ S ++ + LC++P + W + +++ +++DG+ D A++ + + + P +
Sbjct: 114 RLLSGS-VLETESLCVIPGRRVWSIDAEVIIVNNDGNAQDVAQWAVMTALQHVRRPELTI 172
Query: 666 DTETEEIKVETNER--INLKIHGLPVATSFAV 755
E + I +ER + L +H +P++ +FAV
Sbjct: 173 RGE-DVIVHPPHERDPVPLPLHHIPLSFTFAV 203
>UniRef50_Q74ML0 Cluster: NEQ111; n=1; Nanoarchaeum equitans|Rep:
NEQ111 - Nanoarchaeum equitans
Length = 218
Score = 56.0 bits (129), Expect = 2e-06
Identities = 34/141 (24%), Positives = 68/141 (48%)
Frame = +3
Query: 204 YISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDL 383
YI K +DG + D ++ IK + GNT V+ G+ + P E
Sbjct: 3 YIEQKL-MDGFHIDNRPLLEYRPIKIKEDQNRVWLSLGNTQVIAGLSISEEEPM--EKGK 59
Query: 384 GFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVY 563
LI N + + +Y GPP++ ++ ++ +++S I L+ I +K+ Y
Sbjct: 60 ANLIVNADFSPIAGKEYFQGPPTEQDLILARLIDRALRSSNAIALEKHVIDENKVK-SFY 118
Query: 564 CDMVCIDHDGSLVDACIIALI 626
D++ ++ DG+++DA ++A++
Sbjct: 119 IDVIVLEDDGNILDASMLAVV 139
>UniRef50_Q7QP16 Cluster: GLP_83_5565_6509; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_83_5565_6509 - Giardia lamblia ATCC
50803
Length = 314
Score = 55.2 bits (127), Expect = 3e-06
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 2/188 (1%)
Frame = +3
Query: 177 IHPVKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELA 356
++ + H + + TR+DGR E R+I L S TA S +V+ G T V KL A
Sbjct: 1 MNAIPHALEILYTDTRIDGRGIGETRDISL---SFFTARGSVLVEKGKTKVAASSKL--A 55
Query: 357 VPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIV 536
+ ++ G + LP+ + A ++NN + + + + L I+
Sbjct: 56 ILSGKQLRSGRITVTCNLPSELKETIEH---VNLADLLNNTFA----SDQVVPKDTLVII 108
Query: 537 PDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVN--YDTETEEIKVETNERI 710
P + +V+ C + + DG L DACIIA S + +P+V + + + E
Sbjct: 109 PGAMYFVIRCSVEVLQDDGGLRDACIIAAGTSIYHMGIPNVQAYRGSSIDTCNKKQVEEF 168
Query: 711 NLKIHGLP 734
I GLP
Sbjct: 169 TTHIMGLP 176
>UniRef50_A7ARR1 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 267
Score = 54.4 bits (125), Expect = 5e-06
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 6/174 (3%)
Frame = +3
Query: 207 ISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLG 386
++ RLDGR D++ I + N A SA V +T+V+ I + P P+ G
Sbjct: 8 LAANCRLDGRRLDDNPKILIEPNVSTGAHGSAKVILDDTVVITTIMFHVTSPNTNSPEEG 67
Query: 387 FLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIK----NSKCIDLKDLCIVPDKLAW 554
NVE+ S + SD +Q + ++ I++ + + + K LCI+ + W
Sbjct: 68 ----NVEI--TLGSPFTL-EDSDISQKRDERMAHILEMLQFHKQLFNRKLLCILSGQYVW 120
Query: 555 VVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVN--YDTETEEIKVETNERI 710
+ + G ++DA +A+I + T+ +P++ E E + TN R+
Sbjct: 121 TMRIHTTVLQRGGGVMDAVSVAVICAMLTVSVPNIRGVIKDELESSRTATNVRL 174
>UniRef50_A5ATT2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 105
Score = 54.0 bits (124), Expect = 7e-06
Identities = 22/53 (41%), Positives = 38/53 (71%)
Frame = +3
Query: 510 IDLKDLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYD 668
I+LK+L +V K AW+ Y ++ C+D GSL+DA ++A++A+F L +P V+ +
Sbjct: 2 INLKELSLVSGKTAWMAYLEVYCLDAYGSLLDAALLAVVAAFSHLRIPVVSLE 54
>UniRef50_A2F1P7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 329
Score = 54.0 bits (124), Expect = 7e-06
Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 1/197 (0%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITN 401
R DGR FDE R KL V I T A V+ GNT V LA+P P G N
Sbjct: 20 RGDGRRFDESR--KLIVQEITTPGV-ANVQLGNTRVTAITTARLAMPALSTPKKG--THN 74
Query: 402 VELPALCSSKYRPGP-PSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMVC 578
+ + + P A+ I K+ + ++ + LC+ + W++ ++
Sbjct: 75 IYI-------FNDTPVQKSTAEAFQTYFRMIWKSCRILEDESLCVKVGEKVWMLTTRLII 127
Query: 579 IDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNERINLKIHGLPVATSFAVY 758
D DG +++A A++AS +L PS +D T + + R++ G V
Sbjct: 128 HDDDGGILEAGFAAILASLGSLRFPS--FDANTGVLFSPLHHRVHKIAFG--VRAILVTV 183
Query: 759 EHFQSQIILLTDPTNYE 809
F+ +I+ DPT+ E
Sbjct: 184 SFFEDKIV--ADPTSVE 198
>UniRef50_Q00YJ4 Cluster: Exosomal 3'-5' exoribonuclease complex,
subunit Rrp42; n=2; Ostreococcus|Rep: Exosomal 3'-5'
exoribonuclease complex, subunit Rrp42 - Ostreococcus
tauri
Length = 314
Score = 52.8 bits (121), Expect = 2e-05
Identities = 56/262 (21%), Positives = 114/262 (43%), Gaps = 31/262 (11%)
Frame = +3
Query: 201 DYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKA-EEP 377
D ++ R DGR R +++ + + A+ S V G T V ++ ++ +A E
Sbjct: 10 DGVADDCREDGRGRATRRALRMAIGVVPNANGSCAVTLGETSCVAAVRCDVTAIEAWEAS 69
Query: 378 DLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKC---------------- 509
D+G ++ V+ ++ ++ R G + + + + ++ +
Sbjct: 70 DVGAIVLRVDASSIATT--RAGRAAAVGETLRRRLESVVAGRERGVSDASGRASGSGVDA 127
Query: 510 -----IDLKDLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNY--- 665
IDL+ LC+ P + W + D VC GS++DA +A+ + +P V+
Sbjct: 128 WDGGGIDLRSLCVRPGRARWTLAVDAVCACDRGSMLDALSVAVRGALADTKIPKVSLVGV 187
Query: 666 --DTETEEIKVETN----ERINLKIHGLPVATSFAVYEHFQSQIILLTDPTNYEEEMCGG 827
D E E++++ + R+++ G+ VAT+ + +H ++ TD EEE C
Sbjct: 188 GSDGEGGELEIDDDPDACTRVDVSRCGV-VATTTKIGKH---GVVDATD----EEEACAE 239
Query: 828 NGSNLIISYNKGLLCGIQKXGG 893
++ + G++CG GG
Sbjct: 240 ASMSVGVD-RDGMVCGEFTTGG 260
>UniRef50_A3FQP8 Cluster: Exoribonuclease PH, putative; n=2;
Cryptosporidium|Rep: Exoribonuclease PH, putative -
Cryptosporidium parvum Iowa II
Length = 295
Score = 52.0 bits (119), Expect = 3e-05
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 4/151 (2%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITN 401
R DGR+ + R I + ++ I TA+ S+ ++ ++ +K+ F+I
Sbjct: 37 RNDGRDLTDFRPIVIALDVISTANGSSRIRNDELDIIVAVKVSFL-----NNLFFFIIAL 91
Query: 402 VELPALCSSKYRPGPPS----DYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCD 569
+ + K PS DY+ I NIV ++ K DL L I+ +KL W +Y D
Sbjct: 92 ILFSSNIMDKISNVAPSFTEEDYSFYITNIVKDMC--FKNFDLSKLTILENKLYWNIYID 149
Query: 570 MVCIDHDGSLVDACIIALIASFKTLLLPSVN 662
+ G++VD IA+ + +T +P ++
Sbjct: 150 ATILSFGGNMVDWVTIAIHTALRTTRIPKIH 180
>UniRef50_A2FQU8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 262
Score = 52.0 bits (119), Expect = 3e-05
Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 14/217 (6%)
Frame = +3
Query: 219 TRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLIT 398
+R DGR+F++ R I++ K +S+++ G TI+ I +A P+ P +I
Sbjct: 19 SRNDGRSFNDSRPIRITEKCFKDGQSSSLISLGKTIIATKI---VATPQPIAPSFNVVI- 74
Query: 399 NVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIV-PD---------KL 548
N +L S K Q ++ ++ ++ +K + + +L I PD K+
Sbjct: 75 NRSAVSLVSGK------GAVDQTLSAFITVLV--NKLLPMSELEIARPDPHNPFHSNIKI 126
Query: 549 -AWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNERIN---L 716
W + I DG + A ++ + + +TL LP+ N D E + + T+ +IN L
Sbjct: 127 WGWNLKFYQTIISDDGGVEVASVLGIQNTLQTLELPNYNLDDEAKLVDAGTSHKINILSL 186
Query: 717 KIHGLPVATSFAVYEHFQSQIILLTDPTNYEEEMCGG 827
+ T ++ I+L DPT+ EE++ G
Sbjct: 187 YAKNFSILTDDCDPDNDDVNKIILVDPTSDEEKIAFG 223
>UniRef50_Q54VM4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 324
Score = 50.4 bits (115), Expect = 8e-05
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Frame = +3
Query: 486 EIIKNSKCIDLKDLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSV-- 659
+II NS D IV K W +Y D + +D DG+L DA IA ++ + +P V
Sbjct: 158 DIITNSG--DDNCFSIVSGKYYWTLYVDAIVLDSDGNLFDALSIACRSALQNTRIPRVKA 215
Query: 660 ---NYDTETEEIKVETNERINLKIHGLPVATSFAVYEHFQSQIILLTDPTNYEEEMCGGN 830
Y+ T E+ + + ++L I +P+ + +Q ++ T +EE+C
Sbjct: 216 IQGEYEEITFEVSDDPEDTLSLSIDNVPICVTLT---KIGNQFVI---DTTLQEELC--M 267
Query: 831 GSNLIISYNK-GLLCGIQKXG 890
+ L + N +C IQK G
Sbjct: 268 NARLTVGVNSLANICSIQKGG 288
Score = 36.3 bits (80), Expect = 1.5
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAE 371
R DGRN ++RN + I A+ SA VK T V+ G+K E+ ++E
Sbjct: 21 RSDGRNRVDYRNFAIETGEIIHANGSARVKLSQTEVLVGVKAEITHIQSE 70
>UniRef50_Q6BHU9 Cluster: Similar to sp|P25359 Saccharomyces
cerevisiae YCR035c RRP43 rRNA processing protein; n=2;
Saccharomycetaceae|Rep: Similar to sp|P25359
Saccharomyces cerevisiae YCR035c RRP43 rRNA processing
protein - Debaryomyces hansenii (Yeast) (Torulaspora
hansenii)
Length = 347
Score = 49.2 bits (112), Expect = 2e-04
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Frame = +3
Query: 234 RNFDEHRNIKLNVNSIKTADA-----SAVVKCGNTIVVCGIKLELA-VPKA---EEPDLG 386
RNF+E + ++++ +++ + S++VK GNT V+CGI L + PK+ E D
Sbjct: 37 RNFNEFKPLEVSTGNLQELEGNFTVGSSIVKNGNTTVICGITLGIVETPKSSIFESTDSE 96
Query: 387 FLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDL 527
T+V P + S+ R G P+D +++ + E I +SK I K L
Sbjct: 97 STYTSV-YPVVEISRGRSGAPTDEEMILSQKLYETILHSKIISTKSL 142
>UniRef50_Q5KFI0 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 332
Score = 48.4 bits (110), Expect = 3e-04
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 1/149 (0%)
Frame = +3
Query: 210 SIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLE-LAVPKAEEPDLG 386
S TR D R R I+++ A+ S+ VK G T VVCGIKLE + + + D
Sbjct: 24 SYPTRNDARPLFASRPIQISYGVFPQANGSSQVKLGETEVVCGIKLEVIDITGQQIKDQE 83
Query: 387 FLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYC 566
T VE+ + + P + ++ ++ I+ + + L I+P+K + +
Sbjct: 84 KWRTKVEVDV--TPQAFPSISAPSLSALSTHLTSIVTSHFIPSIPALPILPNKKYFQPHL 141
Query: 567 DMVCIDHDGSLVDACIIALIASFKTLLLP 653
+ + G++ A I+A A+F L +P
Sbjct: 142 HLTVLSSSGNIPSALILAARAAFADLKVP 170
>UniRef50_A1DL29 Cluster: 3' exoribonuclease family protein; n=3;
Eurotiomycetidae|Rep: 3' exoribonuclease family protein
- Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
NRRL 181)(Aspergillus fischerianus (strain ATCC 1020 /
DSM 3700 / NRRL 181))
Length = 411
Score = 48.4 bits (110), Expect = 3e-04
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +3
Query: 543 KLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEI--KVETNERINL 716
K WV+Y D++ I G+ DA A++A+ + LP +D + E + +E L
Sbjct: 234 KAFWVLYIDVMIISLAGNPFDAAWAAVLAALRDTKLPKAWWDVDNEMVVCSEAVSEAHKL 293
Query: 717 KIHGLPVATSFAVYE 761
+ G+PVA+SF V+E
Sbjct: 294 SLRGMPVASSFCVFE 308
Score = 36.7 bits (81), Expect = 1.1
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLEL 353
R +GR + R N S+ + SAVV+ G+T VCG++ E+
Sbjct: 49 RANGRATSQFRVTSANTGSLTHTNGSAVVRIGDTAAVCGVRAEI 92
>UniRef50_O45424 Cluster: Putative uncharacterized protein exos-7;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein exos-7 - Caenorhabditis elegans
Length = 312
Score = 48.0 bits (109), Expect = 5e-04
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 7/151 (4%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTI-VVCGIKLELAVPKAE---EPDLGF 389
R DGR+ + R I L + + S V+ G T V+ GIKLEL AE EP
Sbjct: 22 RNDGRSCQDFRQIILERGVLSGTNGSCRVQLGQTTDVLAGIKLELESYDAETEKEPKQPI 81
Query: 390 LITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCI---VPDKLAWVV 560
NV+ A SS++ +YA+ ++ SK +D+ + D W +
Sbjct: 82 NF-NVDFSANASSQFAGKGGDEYAEELSAAFQAAY--SKALDIMPNLAKTQLADGYRWKI 138
Query: 561 YCDMVCIDHDGSLVDACIIALIASFKTLLLP 653
D+ + DGS+ DA IA+I + L P
Sbjct: 139 NVDISVLQWDGSVSDAISIAIIGALSDLEFP 169
>UniRef50_A2F1F8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 263
Score = 47.6 bits (108), Expect = 6e-04
Identities = 45/207 (21%), Positives = 90/207 (43%), Gaps = 11/207 (5%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGN-----TIVVCGIKLELAVPKAEEPDLG 386
R+DGR F + R ++ +N + + +S V G+ T V+ I E+A+ + E DL
Sbjct: 23 RMDGREFLQSRTHEIELNPLPLSPSSCKVIKGHGYSNTTEVIVSINTEVALNEHAEFDLS 82
Query: 387 FLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYC 566
LP ++ QVI + + NS+ ++ + +W +Y
Sbjct: 83 VK----SLPGAFGPNLED---AEICQVIKTTIKHFLVNSEVLEPNQFILFNSPYSWKIYI 135
Query: 567 DMVCIDHDGSLVDACIIALIASFKTLLLPS--VNYDTETEEIKVETNERIN----LKIHG 728
D++ + G + +A ++ + + + + P+ V E+ + +E +K+
Sbjct: 136 DVLILKAAGGVYEASMLGIESCLQNITFPALIVTPGESANELHFDIDESKKAEHLIKVEK 195
Query: 729 LPVATSFAVYEHFQSQIILLTDPTNYE 809
+P +FA Y Q ++I+ DPT E
Sbjct: 196 IPKLYTFAAY---QDKLII--DPTPAE 217
>UniRef50_A1CMV2 Cluster: 3' exoribonuclease family protein; n=5;
Eurotiomycetidae|Rep: 3' exoribonuclease family protein
- Aspergillus clavatus
Length = 416
Score = 46.4 bits (105), Expect = 0.001
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +3
Query: 543 KLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVE--TNERINL 716
K WV+Y D++ I G+ DA A++A+ + LP +D + E + E L
Sbjct: 239 KAFWVLYIDVMIISLAGNPFDAAWTAVLAALRDTKLPKAWWDIDNEMVVCSDAVAEARKL 298
Query: 717 KIHGLPVATSFAVYE 761
+ G+P+A+SF V+E
Sbjct: 299 SLRGMPIASSFCVFE 313
Score = 37.5 bits (83), Expect = 0.64
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLEL 353
R +GR + R N S+ + SAVV+ G+T VCG++ EL
Sbjct: 49 RANGRATSQFRITSANTGSLTHTNGSAVVRIGDTAAVCGVRAEL 92
>UniRef50_A7RQ94 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 268
Score = 33.5 bits (73), Expect(2) = 0.002
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKAEE 374
R DGR DE R + L + A SA ++ NT V+C I P+ +E
Sbjct: 36 RQDGRRPDELRPMFLRAGVVSQAKGSAYIEMKNTKVICAIYGPREAPRRQE 86
Score = 31.5 bits (68), Expect(2) = 0.002
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Frame = +3
Query: 357 VPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIV 536
+ AEE + +L+ PA+C K+ Y V+ N S + C +
Sbjct: 111 IQDAEEKENSYLVVQALEPAVCLEKFPKAQVDIYITVLENDGSALSAGIICASVALAMAG 170
Query: 537 PDKLAWVVYCDMVCIDHDGSLVDAC---IIALIASFKTL--LLPSVN 662
+ L V C MV D+ L+D C I + AS T+ +LPS+N
Sbjct: 171 IEMLDLVSACTMVQSDNH-ILMDPCEKEIHSSSASGHTMVAILPSLN 216
>UniRef50_Q6L223 Cluster: Ribonuclease PH; n=2;
Thermoplasmatales|Rep: Ribonuclease PH - Picrophilus
torridus
Length = 239
Score = 44.4 bits (100), Expect = 0.006
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPK-AEEPDLGFLIT 398
RLDGR F+E R I++ + AD SA ++ G +V + + A PK A+ D +
Sbjct: 13 RLDGRAFNEMRPIRITTGVVDNADGSAYIEWGANKIVVAVYVREAYPKHAQNIDKAIVKA 72
Query: 399 NVELPAL-CSSKYRPGPPSDYAQVINNIVSEIIKNSKCID 515
+ + RPGP + I+ ++SE ++++ ++
Sbjct: 73 RYNMAGFSVEERKRPGPDRRTME-ISKLISEALESAIMVE 111
>UniRef50_Q9UXC2 Cluster: Probable exosome complex exonuclease 1;
n=16; Archaea|Rep: Probable exosome complex exonuclease
1 - Sulfolobus solfataricus
Length = 248
Score = 43.6 bits (98), Expect = 0.010
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGI--KLELAVPKAEEPDLGFLI 395
R DGR DE R+IK+ + +K AD SA+ + GNT + + E+ PD L
Sbjct: 19 RTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLR 78
Query: 396 TNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDL 518
+ + + + PS ++ ++ E ++++ ++L
Sbjct: 79 VRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVEL 119
>UniRef50_Q4T221 Cluster: Chromosome undetermined SCAF10362, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10362,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 75
Score = 42.7 bits (96), Expect = 0.017
Identities = 17/49 (34%), Positives = 32/49 (65%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVPKA 368
R+DGR +++R++++ + + D SA V G+T+V+ GIK E+ K+
Sbjct: 23 RVDGRGCEDYRHMEIETDVVSNTDGSAKVTLGHTVVLVGIKTEIGKTKS 71
>UniRef50_UPI0000498B51 Cluster: exosome complex exonuclease; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: exosome complex
exonuclease - Entamoeba histolytica HM-1:IMSS
Length = 238
Score = 41.9 bits (94), Expect = 0.030
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +3
Query: 201 DYISIKT-RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIV 329
+YIS + RLDGR E R ++ +N + TAD SA V+ GNTIV
Sbjct: 2 EYISPEGYRLDGRRTTEMRKCEMEINFLSTADGSARVRMGNTIV 45
>UniRef50_A2ZJR3 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 385
Score = 41.9 bits (94), Expect = 0.030
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 7/131 (5%)
Frame = +3
Query: 546 LAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYD-----TETEEIKVETNERI 710
+ W +Y D + + DG+L+DA A+ + +P VN E E+ V E +
Sbjct: 249 VCWDLYIDGLVVSSDGNLLDALAGAIKVALSDTGIPKVNVSLSATTDEEPEVDVSDEEFL 308
Query: 711 NLKIHGLPV-ATSFAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNK-GLLCGIQK 884
+PV T V +H+ + D T+ EE S + +S N+ G +CG+ K
Sbjct: 309 QFDTSSVPVIVTLTKVGKHY------IVDATSEEESQM---SSAVSVSVNRHGQICGLTK 359
Query: 885 XGGGSYXQKIM 917
GG ++
Sbjct: 360 RGGAGLDPSVI 370
>UniRef50_O27290 Cluster: Inosine-5'-monophosphate dehydrogenase
related protein I; n=1; Methanothermobacter
thermautotrophicus str. Delta H|Rep:
Inosine-5'-monophosphate dehydrogenase related protein I
- Methanobacterium thermoautotrophicum
Length = 275
Score = 41.1 bits (92), Expect = 0.052
Identities = 29/101 (28%), Positives = 49/101 (48%)
Frame = +3
Query: 567 DMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNERINLKIHGLPVATS 746
D VCID D ++ DA + + LL+ + N D E E + + T + I LK+ G +
Sbjct: 13 DPVCIDKDQNICDALRLMDKRNVSRLLVINTNSDHERELVGIVTEKDIALKL-GSSRYGN 71
Query: 747 FAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGLL 869
A HF ++ + E +M GN +++++ N G L
Sbjct: 72 MAP-SHFHVSTVMTPELITAEPDMDAGNAASVMLENNIGSL 111
>UniRef50_Q9SP08 Cluster: Exonuclease RRP41; n=5; Magnoliophyta|Rep:
Exonuclease RRP41 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 241
Score = 40.7 bits (91), Expect = 0.069
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGI 341
RLDGR F+E R I V + AD SAV + GNT V+ +
Sbjct: 10 RLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAV 49
>UniRef50_Q24GF7 Cluster: 3' exoribonuclease family, domain 1
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: 3' exoribonuclease family, domain 1
containing protein - Tetrahymena thermophila SB210
Length = 270
Score = 40.7 bits (91), Expect = 0.069
Identities = 41/177 (23%), Positives = 79/177 (44%), Gaps = 8/177 (4%)
Frame = +3
Query: 186 VKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCG-NTI-VVCGIKLELAV 359
++ D I R DGR D+ R + +K A+ S+ + N++ + GIK+E+
Sbjct: 10 IEFIRDGFKINIRGDGRKNDQSREYLIQTGQLKQANGSSFISLNDNSVNIYTGIKVEIGE 69
Query: 360 PKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCID---LKDLC 530
+E G +I +E A + + R + I E + N I K LC
Sbjct: 70 TDNDE---GKIILKIE-SAQRTEQNRDQENHINSDKNTLIYLEALLNKYLIQNICKKSLC 125
Query: 531 IVPDKLAWVVYCDMVCIDH-DGSLVDACIIALIASFKTLLLP--SVNYDTETEEIKV 692
IV K W++ D+ ++ + + ++ + A+ + L+LP S+ ++ T E ++
Sbjct: 126 IVEKKKCWILNIDVFILESVEIAYLNLMAAGINAALEDLVLPKISITHNNLTNEDEI 182
>UniRef50_Q5BWV4 Cluster: SJCHGC04363 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04363 protein - Schistosoma
japonicum (Blood fluke)
Length = 103
Score = 40.3 bits (90), Expect = 0.091
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADAS--AVVKCGNTIVVCGIKLELAVPKAEEPDLGFLI 395
RLDGR+ +E+R I K + S VVK G T V+ + +E+ PK P G L
Sbjct: 19 RLDGRSINEYREISFRFPQGKDPNISGCCVVKIGATTVMAQVSVEVIEPKHFRPSQGMLF 78
Query: 396 TNVELPALCSSK 431
+ + L SK
Sbjct: 79 VHFDASILKLSK 90
>UniRef50_Q74NF6 Cluster: NEQ248; n=1; Nanoarchaeum equitans|Rep:
NEQ248 - Nanoarchaeum equitans
Length = 233
Score = 39.5 bits (88), Expect = 0.16
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLE 350
R DGR+++E R+ ++ + I AD SA + GNTI + + L+
Sbjct: 2 RFDGRDYNEIRDTEMKIGVISKADGSAYCRTGNTIAIAAVYLK 44
>UniRef50_Q5CWV7 Cluster: Archeo-eukaryotice exosomal RNAse PH; n=3;
Cryptosporidium|Rep: Archeo-eukaryotice exosomal RNAse
PH - Cryptosporidium parvum Iowa II
Length = 303
Score = 38.7 bits (86), Expect = 0.28
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGI 341
R D R F+E R I + I+ AD SA GNT V+CGI
Sbjct: 47 RNDDRQFEELRPITIRTGVIENADGSAYFSIGNTKVLCGI 86
>UniRef50_Q4Q4S6 Cluster: Exosome-associated protein 2, putative;
n=4; Leishmania|Rep: Exosome-associated protein 2,
putative - Leishmania major
Length = 312
Score = 38.7 bits (86), Expect = 0.28
Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 14/183 (7%)
Frame = +3
Query: 321 TIVVCGIKLELAVPKAEEPDLGFLITNVELPAL-------CSSKYRP-------GPPSDY 458
T + C ++ L P+ E+P G L +VE P + S+ YR G
Sbjct: 92 TCIQCTVQGLLGPPRPEQPAAGRLNVHVEAPFVEHLSGGATSTNYRSFQYMIASGNADLP 151
Query: 459 AQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFK 638
+ + + ++ C DL L I + WV+ ++ + DG L + A +A+
Sbjct: 152 LRQLEGYIGTVLDG--CFDLSQLSIYAGEACWVLKVSVLLLSVDGGLRAGSLHAALAALH 209
Query: 639 TLLLPSVNYDTETEEIKVETNERINLKIHGLPVATSFAVYEHFQSQIILLTDPTNYEEEM 818
L LP + + E +++ +PVA +F +Q+ L+ D T EE +
Sbjct: 210 KLHLPRIRLPNG------DVIEGRQVQLSCMPVACTFGFLA--GAQVRLVADTTAIEEHV 261
Query: 819 CGG 827
G
Sbjct: 262 ADG 264
>UniRef50_Q2H4W8 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 210
Score = 38.3 bits (85), Expect = 0.37
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +3
Query: 219 TRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLEL 353
TR +GR E R + +S+ A S++V+ G+T V+CG++ EL
Sbjct: 37 TRTNGRGTQETRPLHAKTSSLSHAHGSSLVRLGDTTVLCGVRGEL 81
Score = 36.3 bits (80), Expect = 1.5
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 15/127 (11%)
Frame = +3
Query: 585 HDGSLVDACIIALIASFKTLLLPSVN---YDTETEEIKVETNERINLKIHGLPVATSFAV 755
H SLV ++ + LLP +D E E + E+ L + GLPVA + AV
Sbjct: 61 HGSSLVRLGDTTVLCGVRGELLPVERVPLWDPEREMVVCSRTEKRQLNVKGLPVACTAAV 120
Query: 756 YEH----------FQSQIILLTDPTNYEEEMCGGNGSNLIISYNKG--LLCGIQKXGGGS 899
+E + + LL DP EE +C +++ + G + I+K GG +
Sbjct: 121 FEEKELGEVGTGVAEGRHWLLLDPDRLEETLC-REAITMVVDCSDGETRIKSIEKQGGTA 179
Query: 900 YXQKIMR 920
++++R
Sbjct: 180 IGRELVR 186
>UniRef50_Q95QG7 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 277
Score = 37.1 bits (82), Expect = 0.84
Identities = 42/183 (22%), Positives = 75/183 (40%), Gaps = 1/183 (0%)
Frame = +3
Query: 159 SEVYKLIHPVKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCG 338
SEV + I P +F +I DGR + + + +S V G T V C
Sbjct: 3 SEVLRGIDPRGYFATFIKEGVYPDGRGLLDEQKLVFKQGECGGVGSSVVSTQGVT-VSCS 61
Query: 339 IKLELAVPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDL 518
I+ +++ D + +E S K S + N +N +C+D+
Sbjct: 62 IQASVSLVS----DAPLVDIKIEGSQQLSEKDAEDCNSVLLSLFTNNCFVRRENLRCLDV 117
Query: 519 KDLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYD-TETEEIKVE 695
C P L W ++ + + +G+ +DA + AL A+ LPS+ + +E +E +E
Sbjct: 118 ---CGKPLPLEWQLHIIVKVLSLEGNFLDAAVCALGAALVDAKLPSIVLNHSEGDESTIE 174
Query: 696 TNE 704
+
Sbjct: 175 KTQ 177
>UniRef50_Q6CEK7 Cluster: Similar to tr|Q8NKJ5 Saccharomyces
cerevisiae RRNA processing protein; n=1; Yarrowia
lipolytica|Rep: Similar to tr|Q8NKJ5 Saccharomyces
cerevisiae RRNA processing protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 322
Score = 36.7 bits (81), Expect = 1.1
Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Frame = +3
Query: 159 SEVYKLIHPVKHFNDYISIKTR-LDGRNFDEHRNIKLNVNSIK----TADASAVVKCGNT 323
SEV+ + P + + +++ R R F +HR I + +K + + SA + G++
Sbjct: 11 SEVFSRLVPDLYLHRHLNQGLRPATNRAFTQHRKINHFLGGLKKPVGSDEKSASLVWGSS 70
Query: 324 IVVC-GIKLELAVPKAEEPDLGFLITNVEL--PALCSSKYRPGPPSDYAQVINNIVSEII 494
++ G+ + V + + G + NVE+ A SS GPPSD QV++ ++++
Sbjct: 71 LIQADGMSIVCGVTGSVSEEEGGIFVNVEVLRGANGSSAAMGGPPSDEEQVVSRKTTDLL 130
Query: 495 K 497
K
Sbjct: 131 K 131
>UniRef50_P55995 Cluster: ATP-dependent protease La; n=4;
Helicobacter|Rep: ATP-dependent protease La -
Helicobacter pylori (Campylobacter pylori)
Length = 835
Score = 35.9 bits (79), Expect = 2.0
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 591 GSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNERINL 716
G L + I A A KT L+P NY+ + +EI E E +N+
Sbjct: 779 GGLKEKLIAAFKAGIKTALIPVKNYERDLDEIPAEVRENLNI 820
>UniRef50_Q6CA11 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=6;
Saccharomycetales|Rep: Yarrowia lipolytica chromosome D
of strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 287
Score = 35.5 bits (78), Expect = 2.6
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKT-ADASAVVKCGNTIVVCGI 341
R DGR ++E RN +N+ T AD S+ V+ G+T VVC +
Sbjct: 59 RTDGRRWNEIRNFDCKINTHPTSADGSSYVEWGHTKVVCTV 99
>UniRef50_A1DFF4 Cluster: Exosome complex endonuclease 1/ribosomal
RNA processing protein, putative; n=9;
Eurotiomycetidae|Rep: Exosome complex endonuclease
1/ribosomal RNA processing protein, putative -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 269
Score = 35.5 bits (78), Expect = 2.6
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +3
Query: 183 PVKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGI 341
P+ Y K RLDGR ++E R ++ +++ + S+ + GNT ++C +
Sbjct: 2 PLDTSTTYPLTKLRLDGRRWNELRLLQAQISTNPASSGSSFLSMGNTSIMCSV 54
>UniRef50_O42872 Cluster: Putative exosome complex exonuclease
RRP41; n=1; Schizosaccharomyces pombe|Rep: Putative
exosome complex exonuclease RRP41 - Schizosaccharomyces
pombe (Fission yeast)
Length = 242
Score = 35.5 bits (78), Expect = 2.6
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +3
Query: 186 VKHFNDYISIK-TRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVC 335
+ HF + +S++ R DGR +DE RN + + + + SA ++ GNT V+C
Sbjct: 1 MSHF-EILSLEGLRNDGRRWDEMRNFQCRIGIEPSENGSAFIELGNTKVLC 50
>UniRef50_A7RP27 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 710
Score = 35.1 bits (77), Expect = 3.4
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIV 329
R DGR FDE R+I ++N KT S++ K G T V
Sbjct: 305 RCDGRQFDELRSIDCDINLYKTLHGSSLFKRGETQV 340
>UniRef50_Q54EU6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 247
Score = 34.7 bits (76), Expect = 4.5
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 204 YISIK-TRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGI 341
YIS + R+DGR +E R I + + K AD SA + GNT ++ +
Sbjct: 6 YISPEGLRIDGRRANELRRINVEMGIFKRADGSAYYEQGNTKIIAAV 52
>UniRef50_Q5KWI5 Cluster: Ribonuclease PH; n=82; Bacteria|Rep:
Ribonuclease PH - Geobacillus kaustophilus
Length = 256
Score = 34.7 bits (76), Expect = 4.5
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +3
Query: 222 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTIVVCGIKLELAVP 362
R DGR+ E R + ++ + +K A+ S +++ G+T V+C +E VP
Sbjct: 2 RADGRSSCELRPVHIHPHYMKHAEGSVLIEVGDTKVICTATVEEKVP 48
>UniRef50_Q9VU20 Cluster: CG11010-PA; n=6; Diptera|Rep: CG11010-PA -
Drosophila melanogaster (Fruit fly)
Length = 668
Score = 34.3 bits (75), Expect = 6.0
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +3
Query: 315 GNTIVVCGIKLELAVPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVS-EI 491
GNT+ EL+ P A E + L ELPA ++ P P+ A + ++++
Sbjct: 292 GNTLSFSNPVYELSNPTAGESSIEALGQLPELPATPPAQ-EPTTPTTVAFKVEHVITPRR 350
Query: 492 IKNSKCIDLKDLCIVPDKLAWVVYCDMVCI 581
+ SK D+++ + ++A V+Y MVCI
Sbjct: 351 CRPSKLGDIREGFVTRWRVAQVIYPHMVCI 380
>UniRef50_UPI00004991B7 Cluster: predicted protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: predicted protein - Entamoeba
histolytica HM-1:IMSS
Length = 232
Score = 33.9 bits (74), Expect = 7.9
Identities = 35/160 (21%), Positives = 67/160 (41%), Gaps = 6/160 (3%)
Frame = +3
Query: 273 NSIKTADASAVVKCGNTIVVCGIKLELAVPKAEEPDLGFLITNVELPALCSSKYRPGPPS 452
N I +SA + GNT ++CGI E+ + + ++ ++ L K S
Sbjct: 18 NVIHNLKSSASYRIGNTQIICGISTEIVQMIQDGKEPQYIEVEIKRSGLNEDK------S 71
Query: 453 DYAQVINNIVSEIIKNSKCIDLKDLCIV--PDK---LAWVVYCDMVCIDHDGSLVDACII 617
+ I + E++ + + ++ +V DK ++ ID DGS+ D I+
Sbjct: 72 PMIESIPMWIEEVLNDKDLFENREKLLVSTEDKETSFYQKIHLVNYIIDDDGSVFDVAIL 131
Query: 618 ALIASFKTLLLPSVNYDTETEEIKVETNE-RINLKIHGLP 734
A I + TL L + + ET + +++ H +P
Sbjct: 132 ASIKALLTLELQEMKIGLDGLCSYDETKKYQLHFNYHPIP 171
>UniRef50_Q15YM9 Cluster: Peptidase S41; n=2; Alteromonadales|Rep:
Peptidase S41 - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 471
Score = 33.9 bits (74), Expect = 7.9
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = -2
Query: 604 STRLPSWSIHTISQYTTHANLSGT--MQRSFRSMHLEFLIISDTILFITCA*SEGGPGLY 431
S LPS ++TI T+ A S + + R + +E +II DT TC G P +
Sbjct: 299 SNALPSLGLNTIYILTSGATCSASEAVINGLRGIDVEVVIIGDT----TC----GKPYGF 350
Query: 430 LEEHKAGSSTFVIKKPKSGSSAFGTANSSFIP 335
G++ F I+ S FG + FIP
Sbjct: 351 YPTDNCGTTYFTIQFQGSNQKGFGEYSDGFIP 382
>UniRef50_Q6CUN6 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome C of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=2; Saccharomycetaceae|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome C of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 379
Score = 33.9 bits (74), Expect = 7.9
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3
Query: 543 KLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNER 707
K ++V+Y + +G + D C +LI++ KT+ LP D ++K+ R
Sbjct: 201 KWSYVLYAKIQVFSRNGPIYDLCWNSLISALKTVQLPRAFLDERAADLKIAIRTR 255
>UniRef50_Q3KRU5 Cluster: PKSX1; n=1; Xylaria sp. BCC 1067|Rep: PKSX1
- Xylaria sp. BCC 1067
Length = 2598
Score = 33.9 bits (74), Expect = 7.9
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Frame = +3
Query: 252 RNIKLNVNSIKTADASAVVKCGNTI-----VVCG-IKLELA---VPKAEEPDLGFLITNV 404
+N+K N NS T D +AV+ T+ VVCG + +LA + + E+ D I
Sbjct: 2484 QNVKANKNSGATVDLAAVIGAAKTMADATKVVCGGLMTKLAKGLMMELEDLDPSRPINIY 2543
Query: 405 ELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDL 518
+ +L + R D V++ VSEI+KN IDL
Sbjct: 2544 GVDSLIAVDIRAWALKDLQSVVH--VSEILKNQPMIDL 2579
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 886,291,942
Number of Sequences: 1657284
Number of extensions: 16019039
Number of successful extensions: 35442
Number of sequences better than 10.0: 113
Number of HSP's better than 10.0 without gapping: 34067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35384
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 113033143954
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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