Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_B13
         (1247 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...    79   2e-13
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...    63   1e-08
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi...    61   5e-08
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ...    54   1e-05
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h...    45   0.004
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ...    40   0.10 
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma...    37   1.2  

>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score = 79.0 bits (186), Expect = 2e-13
 Identities = 38/55 (69%), Positives = 40/55 (72%)
 Frame = +1

Query: 664 SXGSAPLTXITKIDAQVKGGXTXXDYKDTRRXPLEAPXXAPLXRPXRIXXXCPLF 828
           S GSAPLT ITKIDAQV+GG T  DYKDTRR PLEAP  A L RP R+   CP F
Sbjct: 17  SIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPF 71


>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score = 63.3 bits (147), Expect = 1e-08
 Identities = 45/101 (44%), Positives = 50/101 (49%)
 Frame = +1

Query: 496 SXTRCXRXFGWGKRYXXTQRGXXGYPENQGITQEKTCDQKATKRPETXKRPGCWXXSXGS 675
           S TR  R FG G+RY  T        +  G   E T  +K   + E   RP     S GS
Sbjct: 41  SLTRYARSFGCGERYRLT--------DGDGNFLEDT--RKTLSKEEI--RPRRSRFSIGS 88

Query: 676 APLTXITKIDAQVKGGXTXXDYKDTRRXPLEAPXXAPLXRP 798
           APLT I K DAQ+ GG T  DYKD RR PL AP  A L  P
Sbjct: 89  APLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLP 129


>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
           organisms|Rep: Predicted protein - Nematostella
           vectensis
          Length = 97

 Score = 61.3 bits (142), Expect = 5e-08
 Identities = 30/45 (66%), Positives = 31/45 (68%)
 Frame = +1

Query: 664 SXGSAPLTXITKIDAQVKGGXTXXDYKDTRRXPLEAPXXAPLXRP 798
           S GSAPLT ITK DAQ+ GG T  DYKDTRR PL AP  A L  P
Sbjct: 53  SIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97


>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
           root|Rep: Putative uncharacterized protein - Escherichia
           coli
          Length = 61

 Score = 53.6 bits (123), Expect = 1e-05
 Identities = 24/37 (64%), Positives = 25/37 (67%)
 Frame = -3

Query: 612 LVTCFFLXYPLILWITVXPPLSXXIPFAPAERPGAAS 502
           L+TC F  YPLILWITV PPLS   P A  ERP  AS
Sbjct: 24  LLTCSFRLYPLILWITVLPPLSELTPLAAVERPSVAS 60


>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
           Alpha-hemolysin - Aeromonas hydrophila
          Length = 59

 Score = 45.2 bits (102), Expect = 0.004
 Identities = 24/43 (55%), Positives = 25/43 (58%)
 Frame = +3

Query: 477 PLPXPRLIXSLXPXVRLGQTVSXHSKGXXRLSRESGDNXGKNM 605
           P     L  SL   VRL + VS HSK   RLS ESGDN GKNM
Sbjct: 17  PSSASSLTDSLRSVVRLRRAVSAHSKAVIRLSTESGDNAGKNM 59


>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
           Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. SS
          Length = 114

 Score = 40.3 bits (90), Expect = 0.10
 Identities = 24/77 (31%), Positives = 34/77 (44%)
 Frame = +1

Query: 568 YPENQGITQEKTCDQKATKRPETXKRPGCWXXSXGSAPLTXITKIDAQVKGGXTXXDYKD 747
           +P N  I  ++   + + + P T            S PLT ITKI  Q K   T  +YK 
Sbjct: 38  HPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKY 97

Query: 748 TRRXPLEAPXXAPLXRP 798
           T   PL++P  + L  P
Sbjct: 98  TTPFPLQSPSYSLLFPP 114


>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
           Magnoliophyta|Rep: Putative reverse transcriptase -
           Zingiber officinale (Ginger)
          Length = 49

 Score = 36.7 bits (81), Expect = 1.2
 Identities = 15/19 (78%), Positives = 15/19 (78%)
 Frame = +1

Query: 436 NRPXXGERXXAYWALFRFL 492
           NRP  GER  AYWALFRFL
Sbjct: 29  NRPTRGERRFAYWALFRFL 47


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,083,929
Number of Sequences: 1657284
Number of extensions: 6664694
Number of successful extensions: 13374
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13226
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 126340268808
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)