Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_B10
         (1142 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    24   2.5  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   5.7  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   5.7  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   5.7  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   5.7  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 636 YSVLFLRI*LVNTFIVIIMCD 698
           YSV+F+   +V TF  I +CD
Sbjct: 247 YSVIFILWHIVGTFSGIFLCD 267


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 887 NFTNKAFFSLH 855
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 887 NFTNKAFFSLH 855
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 431 GFFVQRVRHGRQIVC 387
           GFF + +R  RQ VC
Sbjct: 60  GFFKRSIRRNRQYVC 74


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 431 GFFVQRVRHGRQIVC 387
           GFF + +R  RQ VC
Sbjct: 60  GFFKRSIRRNRQYVC 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,665
Number of Sequences: 336
Number of extensions: 3773
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 33197234
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)