Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_B09
(1177 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0056 + 19313422-19313967,19314035-19314168,19314263-193143... 36 0.082
06_03_1186 - 28260487-28262112,28262205-28262345,28262429-282625... 34 0.19
07_03_1107 - 24024387-24024497,24025799-24026410 34 0.25
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 33 0.44
12_02_0263 - 16551831-16551909,16552668-16553173 33 0.58
12_02_0090 + 13493311-13494180 32 1.0
04_04_0293 - 24189344-24189350,24189804-24190026,24190411-241905... 31 1.3
03_04_0029 - 16610182-16611753 31 1.8
02_01_0144 - 1038547-1039650 31 1.8
03_05_0822 - 27963849-27964544,27965043-27965091,27965372-279654... 30 3.1
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 30 3.1
11_06_0610 - 25449085-25453284 30 4.1
08_01_0382 - 3402015-3403604 30 4.1
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 30 4.1
06_03_1146 - 28004896-28005554,28005664-28005844 29 5.4
12_02_0370 + 18139557-18140469,18140561-18140704,18140804-181409... 29 7.1
09_04_0504 + 18180321-18181013 29 7.1
06_03_0324 - 19591267-19592097,19592266-19592583,19592827-19593108 29 7.1
05_05_0392 + 24629528-24630442 29 7.1
03_05_0543 - 25404630-25405408,25405461-25405605 29 7.1
02_05_0528 - 29782382-29782864,29782994-29783092,29783319-297833... 29 7.1
02_04_0232 + 21130122-21130454,21130895-21131053,21131424-211315... 29 7.1
12_02_0262 - 16545875-16546487,16549570-16550216 29 9.4
10_06_0029 + 9822216-9823124,9825210-9825329,9826188-9826304,982... 29 9.4
07_03_1198 + 24734985-24735169,24737897-24737975,24738070-247381... 29 9.4
04_03_0605 - 17923601-17924011,17925559-17925759,17925841-179259... 29 9.4
03_05_0958 - 29200048-29200731 29 9.4
02_05_0686 - 30900748-30902167,30903442-30904742 29 9.4
>02_04_0056 +
19313422-19313967,19314035-19314168,19314263-19314398,
19314870-19314923,19314995-19315135,19315220-19315546,
19315647-19315916,19316080-19316226,19316890-19317045,
19317223-19317290,19318210-19318309,19318696-19318985,
19319074-19319274,19319840-19319902,19320263-19320356,
19320964-19321035,19321979-19322077,19322254-19322376
Length = 1006
Score = 35.5 bits (78), Expect = 0.082
Identities = 20/49 (40%), Positives = 22/49 (44%)
Frame = +3
Query: 408 PAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPE 554
P+ SP PT+ P PT AR PA A E KP VAPE
Sbjct: 58 PSPSPSPSPPAGKPTKPHPESTPPTKTPARSKPAAAAAE-KPRPSVAPE 105
>06_03_1186 -
28260487-28262112,28262205-28262345,28262429-28262573,
28262964-28263067,28263324-28263456,28263904-28264013,
28265144-28265167
Length = 760
Score = 34.3 bits (75), Expect = 0.19
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +3
Query: 417 PAKKSPNQRTPT--RKSPSRKTPTNF-SARKSPARAPKEVKPTAEVAPEVVRQSPSKRP 584
PA + + RTP+ R+ SR+ N SAR+ +R P K +V E V+++PS RP
Sbjct: 544 PANEKVSSRTPSSHRRHTSRQNAVNDGSARRDGSRQPHGGKGMDDVNGENVQRTPSSRP 602
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 33.9 bits (74), Expect = 0.25
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRP 584
+P PA +P + PT +P++ PT + K+PA APK K T A ++P P
Sbjct: 65 APTTPATPAPAE-APTTPAPTKAPPT--KSTKAPAPAPKAAKATPPPASSPPVEAPVASP 121
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 33.1 bits (72), Expect = 0.44
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +3
Query: 408 PAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTA-EVAPEVVRQSPSKRP 584
PA P SP+ P R SPS+ P ++ K P + P A P V P +RP
Sbjct: 197 PAEPPVPSPSPEHPPRHSPSK--PPAYAPAKPPTALRPAIPPAAMPKPPSVAPVQPPQRP 254
>12_02_0263 - 16551831-16551909,16552668-16553173
Length = 194
Score = 32.7 bits (71), Expect = 0.58
Identities = 25/96 (26%), Positives = 41/96 (42%)
Frame = +3
Query: 408 PAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRPA 587
P + P Q P ++ P P+ ++ SP + ++ A VR SP A
Sbjct: 86 PQPQPPQPPPQPQPQQQQPHSGAPSPSQSQASPQQQQQQQAAAMAAAAARVR-SPEVEMA 144
Query: 588 LKSNLSVKLEDLTANFESLRNARNRRIDYTLRDVTS 695
L+ + V D+ F+SL +A N + L + TS
Sbjct: 145 LQDAMRVCNPDIKTPFQSLEDAVNSILLKMLNEHTS 180
>12_02_0090 + 13493311-13494180
Length = 289
Score = 31.9 bits (69), Expect = 1.0
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +3
Query: 402 VSPAHPAKKSPNQRTPTRKSP--SRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPS 575
++PAH +P T R S + TPT S +P+ A V T SP+
Sbjct: 61 LAPAHKQAATPIPATTRRPSAVVATSTPTAPSQTTAPSLATILVPATTSAPKPATASSPT 120
Query: 576 KRPALKSN 599
K PAL N
Sbjct: 121 KVPALSVN 128
>04_04_0293 -
24189344-24189350,24189804-24190026,24190411-24190529,
24191331-24191578
Length = 198
Score = 31.5 bits (68), Expect = 1.3
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAP 551
SPA PA K+P P K+ + P ARK+PA A K TA P
Sbjct: 4 SPAAPAPKAPAAAGPAPKATAPAGP----ARKAPAAAGPAPKATAPAGP 48
>03_04_0029 - 16610182-16611753
Length = 523
Score = 31.1 bits (67), Expect = 1.8
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPA-RAP 518
S A PA SP+ +P SPS ++ RKSPA RAP
Sbjct: 70 STAAPAAASPSIASPAASSPSDVPSSSSKKRKSPAHRAP 108
>02_01_0144 - 1038547-1039650
Length = 367
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 462 PSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSK 578
P+ P+N RK+PA+A K P AP V + P K
Sbjct: 30 PAPPRPSNPRHRKTPAKASKTPAPATAAAPPPVEKRPIK 68
>03_05_0822 -
27963849-27964544,27965043-27965091,27965372-27965480,
27965979-27966006,27966086-27966276,27966418-27966532,
27966955-27967206
Length = 479
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +3
Query: 420 AKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRPA 587
A KS ++ P+ +PS K+ + S +K P E + + A V + P K+ A
Sbjct: 319 ATKSQKKKRPSGPNPSIKSKASSSDQKPKPSKPTEEEREEKAAAAVAAEKPKKKKA 374
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 30.3 bits (65), Expect = 3.1
Identities = 31/142 (21%), Positives = 61/142 (42%), Gaps = 7/142 (4%)
Frame = +3
Query: 423 KKSPNQRTPTRKSPS--RKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRPALKS 596
++SP +R+ S ++P +SP RAP+ + + + + SP +R A +S
Sbjct: 419 RRSPVKRSAISPKISLISRSPDVQGHGRSPVRAPERSESRSPPREKSISMSPQRRSARRS 478
Query: 597 NLSVKLEDLTANFESLRNARNRRIDYTLRDVTSTNSQIIIES-VNGVESKNYHNLRNR-- 767
L + + + R+ R + S+ +++ + + +L+ R
Sbjct: 479 KSRSPLREKSVSMSPRRSMSKSLPRSVSRSPVARRSRSPVKARTRSISRSSARSLQRRSR 538
Query: 768 -RSVEELPPRRS-SRLRDFIDK 827
RS+E P R+S SR +DK
Sbjct: 539 SRSLERSPVRKSVSRSPPTMDK 560
Score = 29.5 bits (63), Expect = 5.4
Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 10/145 (6%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAP---KEV-----KPTAEVAPEVV 560
SP ++S ++ P KS S +P SAR+S +R+P K V + ++ P V
Sbjct: 447 SPVRAPERSESRSPPREKSISM-SPQRRSARRSKSRSPLREKSVSMSPRRSMSKSLPRSV 505
Query: 561 RQSPSKRPALKSNLSVKLEDLT-ANFESL-RNARNRRIDYTLRDVTSTNSQIIIESVNGV 734
+SP R + +S + + ++ ++ SL R +R+R ++ + + + S ++ +
Sbjct: 506 SRSPVARRS-RSPVKARTRSISRSSARSLQRRSRSRSLERSPVRKSVSRSPPTMDKGRSI 564
Query: 735 ESKNYHNLRNRRSVEELPPRRSSRL 809
S+ L RRS+ P R R+
Sbjct: 565 -SRTSGRLPLRRSISRSPDRPYRRI 588
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.9 bits (64), Expect = 4.1
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 417 PAKKSPNQRTPTRKSPSRKTPTN--FSARKSPARAPKEVKPTAEVAP 551
P +KSP +P + PS PT+ S + P A + PT E +P
Sbjct: 776 PEEKSPPPHSPEKSPPSEAHPTSPPPSEKSPPTPAEESSPPTPEKSP 822
>08_01_0382 - 3402015-3403604
Length = 529
Score = 29.9 bits (64), Expect = 4.1
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = +3
Query: 459 SPSRKTPTNFSARKSPARAPKEVKPTAEVAP---EVVRQSPSKRPALKSNLSVKLEDLTA 629
SPS T NFS R P +P A V P E +R+ + A S+L++++
Sbjct: 50 SPSYNTTLNFSIRNLRFTLPDVTRPAAIVLPWSKEDLRR--AILCARNSSLAIRVRSGGH 107
Query: 630 NFESLRNARNRRIDYTLRDVTSTNSQIIIESVN 728
++E L + + + D+ + N ++ ++SV+
Sbjct: 108 SYEGLSYTTENHVPFVVIDLMNLN-RVQVDSVS 139
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 29.9 bits (64), Expect = 4.1
Identities = 46/165 (27%), Positives = 69/165 (41%), Gaps = 10/165 (6%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTP--TRKSPSRKTPT--NFSARKSP----ARAPKEVKPTAEVAPEVV 560
SPA P +SP +R+P T S ++P N S R+SP R+P+ + +V
Sbjct: 249 SPA-PRSRSPRRRSPVKTTSSHRERSPVRRNGSPRRSPVRSIGRSPQRDRVKEQVRSPKQ 307
Query: 561 RQSPSKRPALKSNLSVKLEDLTANFESLRNARNRR--IDYTLRDVTSTNSQIIIESVNGV 734
QS S+ P+ + + + LR A++ R D T D T S+ +S
Sbjct: 308 AQSRSRSPSPARKRESR--SPSPRSKRLRRAQSEREGADATEGDRRKTTSREERDSGRYR 365
Query: 735 ESKNYHNLRNRRSVEELPPRRSSRLRDFIDKFEHDTADGIHSMGR 869
E ++ R E R S + R K +HD D HS R
Sbjct: 366 ERDEGKDVSRDRKTEREDSRGSFKDR----KLDHDD-DRDHSRDR 405
>06_03_1146 - 28004896-28005554,28005664-28005844
Length = 279
Score = 29.5 bits (63), Expect = 5.4
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 405 SPAH-PAKKSPNQRTPT-RKSPSRKTPTNFSARK--SPARAPKEVKPTAEVAPEVVRQSP 572
SPA P +P TP+ SP TP+ + +PA AP P++ AP + SP
Sbjct: 159 SPASSPPSPAPAAATPSLAPSPVATTPSPSPSVSPMAPAPAPTTSTPSSPPAPAAMAPSP 218
Query: 573 SKRP 584
S P
Sbjct: 219 STTP 222
>12_02_0370 +
18139557-18140469,18140561-18140704,18140804-18140956,
18141032-18141147,18141231-18141398,18142110-18142334,
18142458-18142577
Length = 612
Score = 29.1 bits (62), Expect = 7.1
Identities = 18/63 (28%), Positives = 25/63 (39%)
Frame = +3
Query: 408 PAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRPA 587
P H A SP+Q T T +S P+ S++ P P P + P +PA
Sbjct: 23 PRHAAPSSPSQPTTTSRSIPVVLPSAPSSKPPPPTQTAPPVPVVISEPPPPQPQPEPQPA 82
Query: 588 LKS 596
S
Sbjct: 83 APS 85
>09_04_0504 + 18180321-18181013
Length = 230
Score = 29.1 bits (62), Expect = 7.1
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +3
Query: 405 SPAHPAKKSPNQR----TPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSP 572
SPA K+S N + +P P P +A + AP + T + APE + +
Sbjct: 114 SPAKSPKRSKNSKRRRVSPPPPQPVPAPPPPTTADAADVAAPTAPEATTKKAPEDLTAAA 173
Query: 573 SKRPALKSNLSV 608
+ +PA+ L V
Sbjct: 174 ATQPAVALGLGV 185
>06_03_0324 - 19591267-19592097,19592266-19592583,19592827-19593108
Length = 476
Score = 29.1 bits (62), Expect = 7.1
Identities = 19/67 (28%), Positives = 28/67 (41%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRP 584
SP S +R + + T SA ARA EV P +RQ K P
Sbjct: 350 SPVLRRATSRGRRMSPPPTSDAEAATGGSASAPAARANVAEDERVEVVPSPIRQREGKAP 409
Query: 585 ALKSNLS 605
A+++++S
Sbjct: 410 AVEASVS 416
>05_05_0392 + 24629528-24630442
Length = 304
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARA 515
SP P ++ P +R PTR+SPS T R++ A A
Sbjct: 174 SPPPPPRREPGER-PTRRSPSPATKRPPDQRRTAASA 209
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 29.1 bits (62), Expect = 7.1
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 423 KKSPNQRTPTRKSPSRKT-PTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRPA 587
KK+P+ TP+ +PS T P + P R P P P R++P+ PA
Sbjct: 111 KKTPSPLTPS-PTPSPVTPPPQQPPQPEPRRPPAAPLPGVRTPPSPPRRAPAPAPA 165
>02_05_0528 -
29782382-29782864,29782994-29783092,29783319-29783387,
29783781-29783888,29783965-29784274,29784772-29784812,
29784886-29784942,29785290-29785448,29785587-29785655,
29785728-29785877,29785967-29786098,29786347-29786433,
29786516-29786686,29786760-29786960,29787348-29787416,
29787510-29787618,29787887-29788005,29788676-29788780,
29789377-29789755,29790022-29790150,29790223-29790402,
29791310-29791469,29791604-29791744,29791832-29792021,
29792100-29792161,29792879-29793107
Length = 1335
Score = 29.1 bits (62), Expect = 7.1
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = +3
Query: 684 DVTSTNSQIIIESVNGVESKNYHNLRNRRSVEELPPRRSSRLRDFIDKFEHDTADGIHS 860
+V + +++ ++S + K + +N++S E S+ ++ + F H T+DGI S
Sbjct: 802 NVLAPSTKGSVDSTDTKTQKGHEKTQNQKSAEGQKSSLSASSKNIVPTFSHLTSDGIWS 860
>02_04_0232 +
21130122-21130454,21130895-21131053,21131424-21131582,
21132420-21132512,21133321-21133437,21133623-21133697,
21133878-21134104,21134200-21135073
Length = 678
Score = 29.1 bits (62), Expect = 7.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 777 EELPPRRSSRLRDFIDKFEHDTADGIHSMGRH 872
E L P S R DFID+ ++ G S GRH
Sbjct: 491 ESLEPGSSGRSSDFIDQDTTESPSGSKSTGRH 522
>12_02_0262 - 16545875-16546487,16549570-16550216
Length = 419
Score = 28.7 bits (61), Expect = 9.4
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Frame = +3
Query: 438 QRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRPALKSNLSVKLE 617
Q P + P ++ ++ + A + + A VA QSP AL+ + V
Sbjct: 142 QPLPQQPPPPQQQIHSWGPSLLQSWASLQQQQQAAVAAVARVQSPEVEMALQDVMQVCNP 201
Query: 618 DLTANFESLRNARNRRIDY-TLRDVTSTNSQIIIES 722
D+ F+S+ +A NR + Y + D + I++S
Sbjct: 202 DIKTPFQSIEDAVNRLLPYHVVADYEAEEDDRILDS 237
>10_06_0029 +
9822216-9823124,9825210-9825329,9826188-9826304,
9826387-9826476,9826706-9826756
Length = 428
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 471 KTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRPALKS 596
+TP + R++PA A +PT E + PS PA K+
Sbjct: 100 ETPRAAAPRRAPAAAAARPRPTTRRRGEAENERPSPPPASKA 141
>07_03_1198 +
24734985-24735169,24737897-24737975,24738070-24738134,
24738214-24738313,24738429-24738470,24739062-24739100,
24739140-24739330,24739745-24739850
Length = 268
Score = 28.7 bits (61), Expect = 9.4
Identities = 20/70 (28%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +3
Query: 573 SKRPAL-KSNLSVKLEDL-TANFESLRNARNRRIDYTLRDVTSTNSQIIIESVNGVESKN 746
SK AL KS + E L T + L+ ++ ++Y+L+ + S +Q++ ES++ ++ K
Sbjct: 100 SKLDALQKSQRQLLGEQLDTLTIKELQQLEHQ-LEYSLKHIRSKKNQLLFESISELQKKE 158
Query: 747 YHNLRNRRSV 776
+L+N+ +V
Sbjct: 159 -KSLKNQNNV 167
>04_03_0605 -
17923601-17924011,17925559-17925759,17925841-17925991,
17926068-17926299,17926424-17926682,17926805-17926903
Length = 450
Score = 28.7 bits (61), Expect = 9.4
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 420 AKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPK-EVKPTAEVAPEVVRQSPSKRPALKS 596
A+ SP Q T + +K S+ S A EVK E+A V KRP L+
Sbjct: 237 AEMSPQQFIDTVQEKWKKRMQEISSHTSSHEADSLEVKTCIEIAVRCVEPDRKKRPTLRE 296
Query: 597 NLSVKLEDL 623
+ KL +L
Sbjct: 297 IID-KLNEL 304
>03_05_0958 - 29200048-29200731
Length = 227
Score = 28.7 bits (61), Expect = 9.4
Identities = 20/59 (33%), Positives = 23/59 (38%)
Frame = +3
Query: 411 AHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRPA 587
A P KS P K P +TPT K A K KP E P +S +PA
Sbjct: 91 ADPLMKSDAPAPPAEKLPQPQTPTPTGTPKLQAAERKAQKPAKE--PPSPPRSQQPKPA 147
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.7 bits (61), Expect = 9.4
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +3
Query: 411 AHPAKKSPNQRTPT-RKSPSRKTPTNFSARKSPARAPKEVKPTAEVAP 551
A PA SP+ P R+SPSR +A SPA P A AP
Sbjct: 279 ARPASPSPSLPLPPGRESPSRPQSIAAAAVASPAPPPPPPPKPAAAAP 326
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,717,976
Number of Sequences: 37544
Number of extensions: 425758
Number of successful extensions: 1455
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1439
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3596576368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -