Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_B09
(1177 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 44 3e-04
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 39 0.006
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 39 0.006
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 39 0.006
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 39 0.006
Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical p... 38 0.014
Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical pr... 38 0.014
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 36 0.055
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 35 0.097
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 35 0.097
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 34 0.22
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 33 0.30
Z81037-9|CAB02749.2| 425|Caenorhabditis elegans Hypothetical pr... 33 0.39
U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical pr... 33 0.39
Z92827-5|CAB07325.1| 732|Caenorhabditis elegans Hypothetical pr... 33 0.52
Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical p... 33 0.52
Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical pr... 33 0.52
Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical pr... 33 0.52
U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical pr... 32 0.68
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 32 0.90
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 31 1.2
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 31 1.2
Z70782-2|CAA94839.1| 387|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ... 31 1.6
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ... 31 1.6
AF078786-2|AAC26941.1| 889|Caenorhabditis elegans Hypothetical ... 31 1.6
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 31 2.1
Z92830-8|CAB07353.1| 537|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical p... 30 2.8
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 30 2.8
U64858-2|AAN84866.1| 1310|Caenorhabditis elegans Roller: helical... 30 3.6
U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helical... 30 3.6
U40419-8|AAA81428.3| 673|Caenorhabditis elegans Hypothetical pr... 30 3.6
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 30 3.6
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 30 3.6
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 30 3.6
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 30 3.6
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 30 3.6
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical pr... 29 4.8
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 29 4.8
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 29 4.8
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 29 4.8
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 29 4.8
DQ150101-1|AAZ77787.1| 386|Caenorhabditis elegans synthetic mul... 29 4.8
AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical ... 29 4.8
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 29 4.8
AF025452-10|AAB70947.2| 386|Caenorhabditis elegans Hypothetical... 29 4.8
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 29 4.8
U88167-7|AAB42229.1| 378|Caenorhabditis elegans Hypothetical pr... 29 6.4
U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical p... 29 6.4
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 29 8.4
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 29 8.4
Z50756-4|CAA90639.1| 482|Caenorhabditis elegans Hypothetical pr... 29 8.4
Z50741-5|CAA90612.1| 482|Caenorhabditis elegans Hypothetical pr... 29 8.4
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 29 8.4
AF045646-10|AAU05566.1| 548|Caenorhabditis elegans Skp1 related... 29 8.4
AF045646-9|AAL32223.1| 660|Caenorhabditis elegans Skp1 related ... 29 8.4
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 43.6 bits (98), Expect = 3e-04
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 3/138 (2%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPAR---APKEVKPTAEVAPEVVRQSPS 575
SPA A+K+ R S +KTP+ SA KS R A K K ++ +S S
Sbjct: 33 SPAKSARKASKSPARARTSNVKKTPSR-SASKSATRGRTASKTPKTPSKTPSSASARSRS 91
Query: 576 KRPALKSNLSVKLEDLTANFESLRNARNRRIDYTLRDVTSTNSQIIIESVNGVESKNYHN 755
+ +N S +L T + S R+R + T RDV T + + + V + +
Sbjct: 92 RSRGRPTNAS-RLSASTPSASSTSVKRSRSVTKTPRDVVKTIE--VADDEDEVTTPSRLR 148
Query: 756 LRNRRSVEELPPRRSSRL 809
RN R++ + PP SRL
Sbjct: 149 QRNVRNLTQDPPASRSRL 166
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 39.1 bits (87), Expect = 0.006
Identities = 25/73 (34%), Positives = 34/73 (46%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRP 584
SPA P KK + KSP++K + S K ++P PT + EV +SP K P
Sbjct: 1411 SPASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKE-KSPSS--PTKKTGDEVKEKSPPKSP 1467
Query: 585 ALKSNLSVKLEDL 623
K K ED+
Sbjct: 1468 TKKEKSPEKPEDV 1480
Score = 36.7 bits (81), Expect = 0.032
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +3
Query: 426 KSPNQRTPTRKSPSRKTPTNFSARKSPAR-APKEVK-PT-AEVAPEVVRQSPSKRPALKS 596
KSP +++P + K+PT KSP + A +EVK PT E +PE + K P K
Sbjct: 1720 KSPKEKSPEKAEEKPKSPT--KKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSPTKKE 1777
Query: 597 NLSVKLED 620
+ VK+ D
Sbjct: 1778 SSPVKMAD 1785
Score = 35.1 bits (77), Expect = 0.097
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Frame = +3
Query: 408 PAHPAKKSPNQ-RTPTR--KSPSRKTPTNFSA--RKSPARAPKEVK-PT-AEVAPEVVRQ 566
PA P KKS N+ ++PT+ KSP + + KSP +A + K PT E +PE
Sbjct: 1587 PASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSAT 1646
Query: 567 SPSKRPALKSNLSVKLEDLTANFESLRNARNRRIDYTLRDVT 692
K P K K+E+ + ++ ++ D ++ T
Sbjct: 1647 EDVKSPTKKEKSPEKVEEKPTSPTKKESSPTKKTDDEVKSPT 1688
Score = 31.1 bits (67), Expect = 1.6
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +3
Query: 408 PAHPAKK--SPNQ-RTPTRKSPSR-KTPTNFSARKSPARAP-KEVKPTAEVAPEVVRQSP 572
PA P KK SP + +PT+KS + K+PT KSP ++ +E+K E +PE P
Sbjct: 1574 PASPTKKEKSPEKPASPTKKSENEVKSPTK--KEKSPEKSVVEELKSPKEKSPEKADDKP 1631
Query: 573 SKRPALK 593
K P K
Sbjct: 1632 -KSPTKK 1637
Score = 28.7 bits (61), Expect = 8.4
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVK---PTAEVAP 551
SP+ P KK+ ++ + P + + +KSP +PK+ K P AE P
Sbjct: 1832 SPSSPTKKTGDESKEKSPEKPEEKPKSPTPKKSPPGSPKKKKSKSPEAEKPP 1883
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 39.1 bits (87), Expect = 0.006
Identities = 25/73 (34%), Positives = 34/73 (46%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRP 584
SPA P KK + KSP++K + S K ++P PT + EV +SP K P
Sbjct: 1411 SPASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKE-KSPSS--PTKKTGDEVKEKSPPKSP 1467
Query: 585 ALKSNLSVKLEDL 623
K K ED+
Sbjct: 1468 TKKEKSPEKPEDV 1480
Score = 36.7 bits (81), Expect = 0.032
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +3
Query: 426 KSPNQRTPTRKSPSRKTPTNFSARKSPAR-APKEVK-PT-AEVAPEVVRQSPSKRPALKS 596
KSP +++P + K+PT KSP + A +EVK PT E +PE + K P K
Sbjct: 1720 KSPKEKSPEKAEEKPKSPT--KKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSPTKKE 1777
Query: 597 NLSVKLED 620
+ VK+ D
Sbjct: 1778 SSPVKMAD 1785
Score = 35.1 bits (77), Expect = 0.097
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Frame = +3
Query: 408 PAHPAKKSPNQ-RTPTR--KSPSRKTPTNFSA--RKSPARAPKEVK-PT-AEVAPEVVRQ 566
PA P KKS N+ ++PT+ KSP + + KSP +A + K PT E +PE
Sbjct: 1587 PASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSAT 1646
Query: 567 SPSKRPALKSNLSVKLEDLTANFESLRNARNRRIDYTLRDVT 692
K P K K+E+ + ++ ++ D ++ T
Sbjct: 1647 EDVKSPTKKEKSPEKVEEKPTSPTKKESSPTKKTDDEVKSPT 1688
Score = 31.1 bits (67), Expect = 1.6
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +3
Query: 408 PAHPAKK--SPNQ-RTPTRKSPSR-KTPTNFSARKSPARAP-KEVKPTAEVAPEVVRQSP 572
PA P KK SP + +PT+KS + K+PT KSP ++ +E+K E +PE P
Sbjct: 1574 PASPTKKEKSPEKPASPTKKSENEVKSPTK--KEKSPEKSVVEELKSPKEKSPEKADDKP 1631
Query: 573 SKRPALK 593
K P K
Sbjct: 1632 -KSPTKK 1637
Score = 28.7 bits (61), Expect = 8.4
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVK---PTAEVAP 551
SP+ P KK+ ++ + P + + +KSP +PK+ K P AE P
Sbjct: 1832 SPSSPTKKTGDESKEKSPEKPEEKPKSPTPKKSPPGSPKKKKSKSPEAEKPP 1883
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 39.1 bits (87), Expect = 0.006
Identities = 25/73 (34%), Positives = 34/73 (46%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRP 584
SPA P KK + KSP++K + S K ++P PT + EV +SP K P
Sbjct: 1411 SPASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKE-KSPSS--PTKKTGDEVKEKSPPKSP 1467
Query: 585 ALKSNLSVKLEDL 623
K K ED+
Sbjct: 1468 TKKEKSPEKPEDV 1480
Score = 36.7 bits (81), Expect = 0.032
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +3
Query: 426 KSPNQRTPTRKSPSRKTPTNFSARKSPAR-APKEVK-PT-AEVAPEVVRQSPSKRPALKS 596
KSP +++P + K+PT KSP + A +EVK PT E +PE + K P K
Sbjct: 1720 KSPKEKSPEKAEEKPKSPT--KKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSPTKKE 1777
Query: 597 NLSVKLED 620
+ VK+ D
Sbjct: 1778 SSPVKMAD 1785
Score = 35.1 bits (77), Expect = 0.097
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Frame = +3
Query: 408 PAHPAKKSPNQ-RTPTR--KSPSRKTPTNFSA--RKSPARAPKEVK-PT-AEVAPEVVRQ 566
PA P KKS N+ ++PT+ KSP + + KSP +A + K PT E +PE
Sbjct: 1587 PASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSAT 1646
Query: 567 SPSKRPALKSNLSVKLEDLTANFESLRNARNRRIDYTLRDVT 692
K P K K+E+ + ++ ++ D ++ T
Sbjct: 1647 EDVKSPTKKEKSPEKVEEKPTSPTKKESSPTKKTDDEVKSPT 1688
Score = 31.1 bits (67), Expect = 1.6
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +3
Query: 408 PAHPAKK--SPNQ-RTPTRKSPSR-KTPTNFSARKSPARAP-KEVKPTAEVAPEVVRQSP 572
PA P KK SP + +PT+KS + K+PT KSP ++ +E+K E +PE P
Sbjct: 1574 PASPTKKEKSPEKPASPTKKSENEVKSPTK--KEKSPEKSVVEELKSPKEKSPEKADDKP 1631
Query: 573 SKRPALK 593
K P K
Sbjct: 1632 -KSPTKK 1637
Score = 28.7 bits (61), Expect = 8.4
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVK---PTAEVAP 551
SP+ P KK+ ++ + P + + +KSP +PK+ K P AE P
Sbjct: 1832 SPSSPTKKTGDESKEKSPEKPEEKPKSPTPKKSPPGSPKKKKSKSPEAEKPP 1883
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 39.1 bits (87), Expect = 0.006
Identities = 25/73 (34%), Positives = 34/73 (46%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRP 584
SPA P KK + KSP++K + S K ++P PT + EV +SP K P
Sbjct: 1411 SPASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKE-KSPSS--PTKKTGDEVKEKSPPKSP 1467
Query: 585 ALKSNLSVKLEDL 623
K K ED+
Sbjct: 1468 TKKEKSPEKPEDV 1480
Score = 36.7 bits (81), Expect = 0.032
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +3
Query: 426 KSPNQRTPTRKSPSRKTPTNFSARKSPAR-APKEVK-PT-AEVAPEVVRQSPSKRPALKS 596
KSP +++P + K+PT KSP + A +EVK PT E +PE + K P K
Sbjct: 1720 KSPKEKSPEKAEEKPKSPT--KKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSPTKKE 1777
Query: 597 NLSVKLED 620
+ VK+ D
Sbjct: 1778 SSPVKMAD 1785
Score = 35.1 bits (77), Expect = 0.097
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Frame = +3
Query: 408 PAHPAKKSPNQ-RTPTR--KSPSRKTPTNFSA--RKSPARAPKEVK-PT-AEVAPEVVRQ 566
PA P KKS N+ ++PT+ KSP + + KSP +A + K PT E +PE
Sbjct: 1587 PASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSAT 1646
Query: 567 SPSKRPALKSNLSVKLEDLTANFESLRNARNRRIDYTLRDVT 692
K P K K+E+ + ++ ++ D ++ T
Sbjct: 1647 EDVKSPTKKEKSPEKVEEKPTSPTKKESSPTKKTDDEVKSPT 1688
Score = 31.1 bits (67), Expect = 1.6
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +3
Query: 408 PAHPAKK--SPNQ-RTPTRKSPSR-KTPTNFSARKSPARAP-KEVKPTAEVAPEVVRQSP 572
PA P KK SP + +PT+KS + K+PT KSP ++ +E+K E +PE P
Sbjct: 1574 PASPTKKEKSPEKPASPTKKSENEVKSPTK--KEKSPEKSVVEELKSPKEKSPEKADDKP 1631
Query: 573 SKRPALK 593
K P K
Sbjct: 1632 -KSPTKK 1637
Score = 28.7 bits (61), Expect = 8.4
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVK---PTAEVAP 551
SP+ P KK+ ++ + P + + +KSP +PK+ K P AE P
Sbjct: 1832 SPSSPTKKTGDESKEKSPEKPEEKPKSPTPKKSPPGSPKKKKSKSPEAEKPP 1883
>Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 37.9 bits (84), Expect = 0.014
Identities = 23/80 (28%), Positives = 37/80 (46%)
Frame = +3
Query: 432 PNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRPALKSNLSVK 611
PN TP SP+ K P P ++ + V+ T + +P + Q P ++P L S
Sbjct: 455 PNTETPRTVSPASKPPL-------PPQSVERVERTEDASPAPLPQLPIRKPPLPRQQSSN 507
Query: 612 LEDLTANFESLRNARNRRID 671
+ L E++R A +R D
Sbjct: 508 DDSLNEKVETIRRAHQQRQD 527
>Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 37.9 bits (84), Expect = 0.014
Identities = 23/80 (28%), Positives = 37/80 (46%)
Frame = +3
Query: 432 PNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRPALKSNLSVK 611
PN TP SP+ K P P ++ + V+ T + +P + Q P ++P L S
Sbjct: 455 PNTETPRTVSPASKPPL-------PPQSVERVERTEDASPAPLPQLPIRKPPLPRQQSSN 507
Query: 612 LEDLTANFESLRNARNRRID 671
+ L E++R A +R D
Sbjct: 508 DDSLNEKVETIRRAHQQRQD 527
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 35.9 bits (79), Expect = 0.055
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPA-RAPKEVKPTAEVAPE--VVRQSPS 575
S P + P PTR++PS K P R++P+ +AP V P A V P+ V R +P+
Sbjct: 234 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRAPSPKAP--VAPVAPVKPKPFVARPAPN 291
Score = 28.7 bits (61), Expect = 8.4
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 429 SPNQRTPTRKSPSRKTPTNFSARKSPA-RAPKEVKPTAEVAPEVVRQSP-SKRPA 587
+P + P +P+R+ P+ + +P RAP P A VAP V+ P RPA
Sbjct: 237 APRRAPPASAAPTRRAPSPKAPVVAPTRRAPSPKAPVAPVAP--VKPKPFVARPA 289
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 35.1 bits (77), Expect = 0.097
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +3
Query: 417 PAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPS---KRPA 587
PA K R+ + +P+R+ + SA KSP APK K ++ P R+SPS PA
Sbjct: 329 PAPKRAKSRSKSPPAPARRRRSP-SASKSPPPAPKRAKSRSKSPPARRRRSPSASKSPPA 387
Query: 588 LKSNLSVKLEDLTANFESLRNARNRR 665
+ S A + AR RR
Sbjct: 388 PRRRRSPSKSRSPAPKREIPPARRRR 413
Score = 29.9 bits (64), Expect = 3.6
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +3
Query: 408 PAHPAKKSPNQRTPTRK--SPSR-KTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPS 575
PA KS ++ P R+ SPS K+P R+SP+++ + P E+ P R+SPS
Sbjct: 359 PAPKRAKSRSKSPPARRRRSPSASKSPPAPRRRRSPSKS-RSPAPKREIPPARRRRSPS 416
Score = 29.1 bits (62), Expect = 6.4
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +3
Query: 405 SPAHPAKKSPN---QRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPS 575
SPA ++SP+ Q R+SPS + R+SPA AP+ + R+SPS
Sbjct: 448 SPAPRRRRSPSKSPQAPRRRRSPSGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSPS 507
Query: 576 KRPALKS 596
+S
Sbjct: 508 SSSRSRS 514
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 35.1 bits (77), Expect = 0.097
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPA-RAPKEVKPTAEVAPEVVRQSPS 575
S P + P PTR++PS K P R++P+ +AP + P V R +PS
Sbjct: 238 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRAPSPKAPVASVAPVKPKPFVARPAPS 295
Score = 30.3 bits (65), Expect = 2.8
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +3
Query: 405 SPAHPAKK-SPNQRTPTRKSPSRKTPTNFSARKSPA-RAPKEVKPTAEVAPEVVRQSP-S 575
+P P+ +P + P +P+R+ P+ + +P RAP P A VAP V+ P
Sbjct: 232 APKRPSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRAPSPKAPVASVAP--VKPKPFV 289
Query: 576 KRPA 587
RPA
Sbjct: 290 ARPA 293
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 33.9 bits (74), Expect = 0.22
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 417 PAKKSPNQRTPTRKSPSRKTPTNFSARKSPAR-APKEVKPTAEVAPEVVRQSPSKRPALK 593
P +++P + P + P ++ P + +++P R AP KP + AP V+Q+P K PA++
Sbjct: 290 PVQQAPPKPVPQQTPPVQQAPPKPAVQQAPTRAAPAPPKPAPQQAPP-VQQNPPK-PAVQ 347
Score = 32.7 bits (71), Expect = 0.52
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +3
Query: 402 VSPAHPAKKSPNQRTPTRKS---PSRKTPTNFSARKSPARAPK-EVKPTAEVAPEVVRQS 569
V PA+K Q P + + P + +K A+AP + KPT + AP +V Q+
Sbjct: 51 VQQTQPAQKQQAQAPPAAQQIPVVQQAPPAQPAQQKPVAQAPPAQAKPTVQQAPILVAQA 110
Query: 570 PSKRPA 587
P PA
Sbjct: 111 PPNPPA 116
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +3
Query: 417 PAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRPA 587
P K +P Q P R++P + + +AP KP + AP V + P P+
Sbjct: 366 PPKPTPQQAPPVRQNPPMPAVQQAPSSQQATQAPP--KPAPQQAPPVQQNPPKPTPS 420
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore
complex protein protein7 protein.
Length = 1217
Score = 33.5 bits (73), Expect = 0.30
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 561 RQSPSKRPALKSNLSVKLEDLTANFE-SLRNARNRRIDYTLRDVTSTNSQIIIESVNGVE 737
+ SPS PALK+ LSV E A+ E S+ ++N RI LR ++ T + NG+E
Sbjct: 42 KSSPSASPALKNILSVDNEAKIASDETSVNTSQNHRIGSRLRYLSPTALDRRTSASNGLE 101
>Z81037-9|CAB02749.2| 425|Caenorhabditis elegans Hypothetical
protein C17E4.1 protein.
Length = 425
Score = 33.1 bits (72), Expect = 0.39
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = +3
Query: 426 KSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRPALKSNLS 605
KSP+ R + + KTP+ +A SP + K + E+ +Q KRP+
Sbjct: 88 KSPDSRKEPETAETAKTPSPSAAPVSPVLEKSKTKTNQKSTTEIEQQKIVKRPSANRKNQ 147
Query: 606 VKLEDLTANFESLRN 650
V+ + +E +++
Sbjct: 148 VETKREEKKYEKVKS 162
>U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical protein
C27F2.8 protein.
Length = 1715
Score = 33.1 bits (72), Expect = 0.39
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 432 PNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPS 575
P Q TP++ KTP+ + + PA +P + PT+ + V P+
Sbjct: 1360 PKQPTPSKARTPSKTPSQSNRAQHPASSPAPIAPTSAPTDDFVHVPPT 1407
>Z92827-5|CAB07325.1| 732|Caenorhabditis elegans Hypothetical
protein C29F7.6 protein.
Length = 732
Score = 32.7 bits (71), Expect = 0.52
Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 6/123 (4%)
Frame = +3
Query: 423 KKSPNQRTPTRKSPSRKTPTN---FSARKSPARAPKEVKPTAEVAPEVVRQSP---SKRP 584
+K+PN + T K P + P N + + + +P A+ + P +K
Sbjct: 63 RKAPNDESSTFKIPKTEDPANNVEVDMKLASSESPNSNFYVAQCMAHNIHLLPENTNKET 122
Query: 585 ALKSNLSVKLEDLTANFESLRNARNRRIDYTLRDVTSTNSQIIIESVNGVESKNYHNLRN 764
LK +K ED +L + R DY L TS QI+ V+ VE+ N R
Sbjct: 123 KLKILEFIKSEDEVDCSMNLVPLSSNRPDYML---TSGVRQILKNLVSAVENSKSKNTRG 179
Query: 765 RRS 773
R+S
Sbjct: 180 RKS 182
>Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical
protein F53F4.11 protein.
Length = 543
Score = 32.7 bits (71), Expect = 0.52
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 405 SPAHPAKKS--PNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSK 578
SP A+KS TP K+P+ KTP+ KS P PT VV+ +K
Sbjct: 35 SPKTRAQKSLAAGGATPAPKTPAPKTPSR--TTKSTVDTPAPKTPTRAAKTPVVKTPAAK 92
Query: 579 RPALKS 596
PA K+
Sbjct: 93 TPAKKA 98
>Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical protein
F40F11.2b protein.
Length = 1607
Score = 32.7 bits (71), Expect = 0.52
Identities = 26/116 (22%), Positives = 45/116 (38%)
Frame = +3
Query: 423 KKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRPALKSNL 602
K SP + TPT+ K+P K+P + P ++ P+ + + PA K L
Sbjct: 1171 KASPAETTPTKLQLKEKSPAKTPVFKTPLQTPIKMTPSPSESRKRRSAKIEDSPAQKKKL 1230
Query: 603 SVKLEDLTANFESLRNARNRRIDYTLRDVTSTNSQIIIESVNGVESKNYHNLRNRR 770
LR + ++ LR T+ + I+ ++ V H + RR
Sbjct: 1231 LNSGSSFVTPKNGLRAELDETVERPLR--IMTDGRKIVMKISKVSRNINHFVTPRR 1284
>Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical protein
F40F11.2a protein.
Length = 1593
Score = 32.7 bits (71), Expect = 0.52
Identities = 26/116 (22%), Positives = 45/116 (38%)
Frame = +3
Query: 423 KKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRPALKSNL 602
K SP + TPT+ K+P K+P + P ++ P+ + + PA K L
Sbjct: 1157 KASPAETTPTKLQLKEKSPAKTPVFKTPLQTPIKMTPSPSESRKRRSAKIEDSPAQKKKL 1216
Query: 603 SVKLEDLTANFESLRNARNRRIDYTLRDVTSTNSQIIIESVNGVESKNYHNLRNRR 770
LR + ++ LR T+ + I+ ++ V H + RR
Sbjct: 1217 LNSGSSFVTPKNGLRAELDETVERPLR--IMTDGRKIVMKISKVSRNINHFVTPRR 1270
>U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical
protein K03C7.1 protein.
Length = 867
Score = 32.3 bits (70), Expect = 0.68
Identities = 19/68 (27%), Positives = 26/68 (38%)
Frame = +3
Query: 417 PAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRPALKS 596
PA K P+ P K A K+PA+ P E EV E+ + + +PA
Sbjct: 2 PAPKKPDSEDPADSLGGPKPKDPKLASKAPAKKPSETPKPKEVPKELPKPAEPSKPAAPK 61
Query: 597 NLSVKLED 620
ED
Sbjct: 62 KWRPPWED 69
Score = 29.9 bits (64), Expect = 3.6
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 417 PAKKSPNQRTPTRK--SPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSK 578
PA K P+ P P +K P A+K+PA+ P + KP + AP+ + +P +
Sbjct: 371 PAPKKPDTEDPADPLGGPKKKDPK--LAKKAPAKKPTD-KPKPKDAPKDAKPTPEE 423
Score = 29.5 bits (63), Expect = 4.8
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +3
Query: 417 PAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRP 584
P KK P +K+P++K PT+ + P APK+ KPT E + V K P
Sbjct: 388 PKKKDPKL---AKKAPAKK-PTD---KPKPKDAPKDAKPTPEEPAKPVAPKKWKPP 436
Score = 28.7 bits (61), Expect = 8.4
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +3
Query: 417 PAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRPA 587
PA K P+ P K A+K+PA+ P + + +V E + + +PA
Sbjct: 207 PAPKKPDTEDPADPLGGPKPKDPKLAKKAPAKKPTDKPKSKDVPKEAPKPAEPPKPA 263
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 31.9 bits (69), Expect = 0.90
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRP 584
+P P TPT + TPT + KS P +K T P ++ SP+
Sbjct: 389 TPTTPTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKST-PTTPSTMKSSPTTPT 447
Query: 585 ALKSN 599
+K++
Sbjct: 448 TMKTS 452
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +3
Query: 411 AHPAKKSPNQRTPTRKSPSRKTPTNFSARK---SPARAPKEVKPTAEVAPEVVRQSPSKR 581
A + S + P +K+P + TP A+K S + E KPT +V +S +K+
Sbjct: 371 ADSSSDSSDDEAPAKKTPVKPTPVKIVAKKVDSSSDSSDDEKKPTKATPVKVTPKSVTKK 430
Query: 582 PALKSN 599
A S+
Sbjct: 431 AAASSS 436
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +3
Query: 411 AHPAKKSPNQRTPTRKSPSRKTPTNFSARK---SPARAPKEVKPTAEVAPEVVRQSPSKR 581
A + S + P +K+P + TP A+K S + E KPT +V +S +K+
Sbjct: 646 ADSSSDSSDDEAPAKKTPVKPTPVKIVAKKVDSSSDSSDDEKKPTKATPVKVTPKSVTKK 705
Query: 582 PALKSN 599
A S+
Sbjct: 706 AAASSS 711
Score = 30.3 bits (65), Expect = 2.8
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 402 VSPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPAR-APKEVKPTAEVAPEVVRQSPSK 578
V+ PAK +P S S + A+K+PA+ APK V AE + + K
Sbjct: 263 VAKPAPAKATPKPAAKKADSSSDSSDDEAPAKKTPAKAAPKPVAKKAESSSD--SSDDEK 320
Query: 579 RPALK 593
+PA K
Sbjct: 321 KPAAK 325
>Z70782-2|CAA94839.1| 387|Caenorhabditis elegans Hypothetical
protein R04B5.3 protein.
Length = 387
Score = 31.5 bits (68), Expect = 1.2
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 495 RKSPARAPKEVKPTAEVAPEVVRQSPSKRPALKSNLSVKLEDLTANFESLRNARN 659
R P + K + P+ V+P + S + P + + L+ + AN+E L+N+RN
Sbjct: 97 RDKPQKEEKLILPSMNVSPADIEVSCIEVPIAVEAMPI-LQKMLANYEKLKNSRN 150
>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
protein Y38E10A.6b protein.
Length = 1345
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +3
Query: 435 NQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQS---PSKRPALKSNLS 605
+++ P + K+P R+ P++ + T+E PE+ S PA +
Sbjct: 958 SEKAPEKPQEIEKSPKKSEKRQEIQEIPQKSEKTSEKRPEIEELPTFFKSSAPAQTPEI- 1016
Query: 606 VKLEDLTANFESLRNA 653
+ ED+ A +ESL NA
Sbjct: 1017 ISDEDIFAQYESLLNA 1032
>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
protein Y38E10A.6a protein.
Length = 1343
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +3
Query: 435 NQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQS---PSKRPALKSNLS 605
+++ P + K+P R+ P++ + T+E PE+ S PA +
Sbjct: 956 SEKAPEKPQEIEKSPKKSEKRQEIQEIPQKSEKTSEKRPEIEELPTFFKSSAPAQTPEI- 1014
Query: 606 VKLEDLTANFESLRNA 653
+ ED+ A +ESL NA
Sbjct: 1015 ISDEDIFAQYESLLNA 1030
>AF078786-2|AAC26941.1| 889|Caenorhabditis elegans Hypothetical
protein M01G5.1 protein.
Length = 889
Score = 31.1 bits (67), Expect = 1.6
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 453 RKSPSRKTPTNFSARKSPARAPKEVKPTA-EVAPEVVRQSPSKRPALKSNLSVKLEDLTA 629
RKS R + F +KSP A K V P A EV P ++P++ L L ++ A
Sbjct: 444 RKSLKRALRSQFLLKKSPKIAEKPVVPDAIEVEPTTTSEAPAEARGATDFLDDILTEM-A 502
Query: 630 NFESLRNARN 659
+S + A+N
Sbjct: 503 TKKSKKEAKN 512
>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical
protein F54D11.2 protein.
Length = 1145
Score = 30.7 bits (66), Expect = 2.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 408 PAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPK 521
P P KK + PT SP + TPT+ ++ AR K
Sbjct: 214 PLVPEKKPKIEDAPTTSSPKKSTPTSAPPTRASARVSK 251
>Z92830-8|CAB07353.1| 537|Caenorhabditis elegans Hypothetical
protein F11A5.9 protein.
Length = 537
Score = 30.3 bits (65), Expect = 2.8
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +3
Query: 684 DVTSTNSQIIIESVNGVESKNYHNLRNRRSVEELPPRRSSRLRDFIDKFEHDTADG 851
D + N II S +G N L N ++E S L D ++ EH ADG
Sbjct: 45 DTLTLNFTIICMSGDGAPVSNRSALTNLENMEMTLVNASGSLTDNVENMEHKIADG 100
>Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical
protein C08H9.4b protein.
Length = 465
Score = 30.3 bits (65), Expect = 2.8
Identities = 14/56 (25%), Positives = 30/56 (53%)
Frame = +3
Query: 591 KSNLSVKLEDLTANFESLRNARNRRIDYTLRDVTSTNSQIIIESVNGVESKNYHNL 758
K+N + +++L F L+N NR+ D+ + V S+N ++ V + S ++ +
Sbjct: 235 KNNYLMFIQELRYAFTELQNKLNRKEDFVISLVASSNLNLLFNLVEFLNSVDFFGI 290
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 30.3 bits (65), Expect = 2.8
Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 1/99 (1%)
Frame = +3
Query: 438 QRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRPALKSNLSVKLE 617
+R+P R+ R P R+SP R+ +V P R SP K L+ + +
Sbjct: 110 RRSPPRRRDRRTPPRRSPGRRSPPRSRLPGPERRDVMPFNPRHSPPKNAKLELTAEERDQ 169
Query: 618 DLTANFESLRNARNRRIDYTLRDVTSTNS-QIIIESVNG 731
+ R+ R R ++ V + +II +S G
Sbjct: 170 RTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTG 208
>U64858-2|AAN84866.1| 1310|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform c
protein.
Length = 1310
Score = 29.9 bits (64), Expect = 3.6
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 663 RIDYTLRDVTSTNSQIIIESVNGVESKNYHNLRNRRSVEELPPRRSSRLRDFID 824
+I T RD I+ +G ++ N+ ++ S E PP S R+RDFID
Sbjct: 1059 KIFETFRDDQKCQDDKPIQFNDGTDNTNFSASQDSTSSRE-PPSPSHRMRDFID 1111
>U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform a
protein.
Length = 2456
Score = 29.9 bits (64), Expect = 3.6
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 663 RIDYTLRDVTSTNSQIIIESVNGVESKNYHNLRNRRSVEELPPRRSSRLRDFID 824
+I T RD I+ +G ++ N+ ++ S E PP S R+RDFID
Sbjct: 2205 KIFETFRDDQKCQDDKPIQFNDGTDNTNFSASQDSTSSRE-PPSPSHRMRDFID 2257
>U40419-8|AAA81428.3| 673|Caenorhabditis elegans Hypothetical
protein C27F2.1 protein.
Length = 673
Score = 29.9 bits (64), Expect = 3.6
Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Frame = +3
Query: 546 APEVVRQSPSKRPALKSNLSVKLEDLTANF-ESLRNARNRRIDYTLRDVTS---TNSQII 713
AP+V + P K +++ + + +N + L + RR + + + + +N+QI
Sbjct: 76 APKV-EEKPQKESKVEAEVDNEFVSFESNIMQRLATSHMRRTEASPKPTIAPKISNAQIT 134
Query: 714 IESVNGVESKNYHNLRNRRSVEELPPRRSSRLRDFI 821
++S + +YHN R++ E+ R ++LR I
Sbjct: 135 VQSTIDNKPYSYHNEEERQTQEQRAFGRLNKLRGLI 170
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 29.9 bits (64), Expect = 3.6
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +3
Query: 408 PAHPAKKS---PNQRTP-TRKSP-SRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSP 572
PA P + + P +TP T K+P + +TP K+PA E +P AE V P
Sbjct: 453 PATPTESNLTTPAPKTPKTPKTPRTPRTPKTPRTPKTPAVVEPEPEPVAEEPEPVAEPEP 512
Query: 573 SKRPALKS 596
P ++
Sbjct: 513 EPEPVAEA 520
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 29.9 bits (64), Expect = 3.6
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +3
Query: 408 PAHPAKKS---PNQRTP-TRKSP-SRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSP 572
PA P + + P +TP T K+P + +TP K+PA E +P AE V P
Sbjct: 403 PATPTESNLTTPAPKTPKTPKTPRTPRTPKTPRTPKTPAVVEPEPEPVAEEPEPVAEPEP 462
Query: 573 SKRPALKS 596
P ++
Sbjct: 463 EPEPVAEA 470
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 29.9 bits (64), Expect = 3.6
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +3
Query: 408 PAHPAKKS---PNQRTP-TRKSP-SRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSP 572
PA P + + P +TP T K+P + +TP K+PA E +P AE V P
Sbjct: 453 PATPTESNLTTPAPKTPKTPKTPRTPRTPKTPRTPKTPAVVEPEPEPVAEEPEPVAEPEP 512
Query: 573 SKRPALKS 596
P ++
Sbjct: 513 EPEPVAEA 520
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 29.9 bits (64), Expect = 3.6
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +3
Query: 408 PAHPAKKS---PNQRTP-TRKSP-SRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSP 572
PA P + + P +TP T K+P + +TP K+PA E +P AE V P
Sbjct: 453 PATPTESNLTTPAPKTPKTPKTPRTPRTPKTPRTPKTPAVVEPEPEPVAEEPEPVAEPEP 512
Query: 573 SKRPALKS 596
P ++
Sbjct: 513 EPEPVAEA 520
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 29.9 bits (64), Expect = 3.6
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +3
Query: 423 KKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRPALK 593
++SP +RT RKS S+K + +S +EV+ + + + +R+SP ++PA K
Sbjct: 544 EESPKKRTSPRKS-SKKRAAKEESEESSDNEVEEVEDSPKKNDKTLRKSP-RKPAAK 598
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 29.5 bits (63), Expect = 4.8
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNF-----SA----RKSPARAPKEVKPTAE--VAP 551
+PA P P + +P+ K PT SA R +PA+APK +P A+ VA
Sbjct: 343 TPATRTAVPPRATAPPKAAPASKAPTRAPIPARSAPAPPRGAPAKAPK-AEPIAQKKVAG 401
Query: 552 EVVRQSPSK 578
+V R +PSK
Sbjct: 402 KVQRAAPSK 410
>Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical
protein C29A12.3a protein.
Length = 773
Score = 29.5 bits (63), Expect = 4.8
Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 3/90 (3%)
Frame = +3
Query: 402 VSPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTA---EVAPEVVRQSP 572
VSP KK P + +P KSP + +P A K + E +V SP
Sbjct: 676 VSPKKFEKKPPVKSSPVNKSPVKSSPIKKEAEKKKGPVASIFSSSTKKNEKDVKVESPSP 735
Query: 573 SKRPALKSNLSVKLEDLTANFESLRNARNR 662
++ L S+ E+ + N + R+R
Sbjct: 736 IRKKKLPSDSDESDEETSTNKKQPAKKRSR 765
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 29.5 bits (63), Expect = 4.8
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 447 PTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRPALK 593
P +K+P K +A K +PK+ P+ E P +V +P K PA K
Sbjct: 164 PAKKTPVLKKKEPAAAAKPRDPSPKKAAPSKEHDP-IVPPTPIKNPAKK 211
Score = 29.5 bits (63), Expect = 4.8
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSP--SRKTPTNFSARKSPA---RAPKEVKPTAEVAPEVVRQS 569
+P K+ P P +K+P +K P + + P+ APK+V+P++ V P ++
Sbjct: 288 TPVEEVKEPP---VPEKKAPVLKKKDPAPAAKARDPSPSKAAPKKVEPSSPVVPPTPVKN 344
Query: 570 PSKR 581
P K+
Sbjct: 345 PVKK 348
Score = 29.1 bits (62), Expect = 6.4
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +3
Query: 420 AKKSPNQRTPTRKSPSRKTPTNFSARKSPA---RAPKEV-KPTAEVAPEVVRQSPSKRP 584
AKK+P + S + P + K P +AP E KPT + + ++ SP+K+P
Sbjct: 1081 AKKAPTKPATKPDSEAAADPVSGPTSKDPKLSKKAPVEKPKPTTDPKDDKLKPSPAKKP 1139
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 29.5 bits (63), Expect = 4.8
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Frame = +3
Query: 594 SNLSVKLEDLTANFESLRNARNRRIDYTLRDVTSTNSQIIIESVNGVESKN-YHNLRN-- 764
+N+S+K +FE R+A + D + + ++ ++++E G N H R+
Sbjct: 29 NNISMKYGFAFVDFEDSRDAEDACHDLDGKTMEGSSMRLVVEMARGKPRGNDRHGSRSPR 88
Query: 765 RRS-----VEELPPRRSSRLRD 815
RRS PPRR SR RD
Sbjct: 89 RRSRSPRRRSRTPPRRRSRSRD 110
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 29.5 bits (63), Expect = 4.8
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Frame = +3
Query: 594 SNLSVKLEDLTANFESLRNARNRRIDYTLRDVTSTNSQIIIESVNGVESKN-YHNLRN-- 764
+N+S+K +FE R+A + D + + ++ ++++E G N H R+
Sbjct: 29 NNISMKYGFAFVDFEDSRDAEDACHDLDGKTMEGSSMRLVVEMARGKPRGNDRHGSRSPR 88
Query: 765 RRS-----VEELPPRRSSRLRD 815
RRS PPRR SR RD
Sbjct: 89 RRSRSPRRRSRTPPRRRSRSRD 110
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 29.5 bits (63), Expect = 4.8
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Frame = +3
Query: 594 SNLSVKLEDLTANFESLRNARNRRIDYTLRDVTSTNSQIIIESVNGVESKN-YHNLRN-- 764
+N+S+K +FE R+A + D + + ++ ++++E G N H R+
Sbjct: 29 NNISMKYGFAFVDFEDSRDAEDACHDLDGKTMEGSSMRLVVEMARGKPRGNDRHGSRSPR 88
Query: 765 RRS-----VEELPPRRSSRLRD 815
RRS PPRR SR RD
Sbjct: 89 RRSRSPRRRSRTPPRRRSRSRD 110
>DQ150101-1|AAZ77787.1| 386|Caenorhabditis elegans synthetic
multivulva protein LIN-8 protein.
Length = 386
Score = 29.5 bits (63), Expect = 4.8
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +3
Query: 459 SPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRPALKSNLSVKLEDLTANFE 638
SP+ + P FSA+ PA AP P+ V K PA+ +N ++ +T ++
Sbjct: 285 SPAVQKPVTFSAQ--PAPAPVREAPSPVVENVSSSSFTPKPPAMINNFGEEMNQIT--YQ 340
Query: 639 SLRNARNR 662
++R AR +
Sbjct: 341 AIRIAREQ 348
>AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical
protein Y59A8A.3 protein.
Length = 676
Score = 29.5 bits (63), Expect = 4.8
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPT-RKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSP-SK 578
+PA A +PN TPT ++ PS K K P ++V+ T AP +P ++
Sbjct: 80 APASAAPAAPNAPTPTAQQQPSPKASAAPIPEK-PEIQVQKVESTQASAPIPAPAAPTTQ 138
Query: 579 RPALKSNLSVKLEDL 623
+ + K SV L+DL
Sbjct: 139 KSSPKERKSVNLKDL 153
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 29.5 bits (63), Expect = 4.8
Identities = 18/62 (29%), Positives = 24/62 (38%)
Frame = +3
Query: 408 PAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRPA 587
P P K S + + P SPS TP R+ + ++P A R P R A
Sbjct: 495 PVTPKKASSSSKMPPPPSPSPSTPGR-RGRRPRTLSTMSMEPAAAAVTPAPRGRPRSRSA 553
Query: 588 LK 593
K
Sbjct: 554 AK 555
>AF025452-10|AAB70947.2| 386|Caenorhabditis elegans Hypothetical
protein B0454.1 protein.
Length = 386
Score = 29.5 bits (63), Expect = 4.8
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +3
Query: 459 SPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRPALKSNLSVKLEDLTANFE 638
SP+ + P FSA+ PA AP P+ V K PA+ +N ++ +T ++
Sbjct: 285 SPAVQKPVTFSAQ--PAPAPVREAPSPVVENVSSSSFTPKPPAMINNFGEEMNQIT--YQ 340
Query: 639 SLRNARNR 662
++R AR +
Sbjct: 341 AIRIAREQ 348
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 29.5 bits (63), Expect = 4.8
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Frame = +3
Query: 435 NQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVR---QSPSKRPALKSNLS 605
N+R+ KS RK S + SP + E PT ++ + +S S +P + N++
Sbjct: 12 NERSIVAKSTERKNKIPPSLKLSPVESVGEKSPTPATVYDLFKKYHKSDSVKPTEEDNMN 71
Query: 606 VKLEDLTANFESLRNARNRRIDYTLRDVTSTNSQIIIESVNGVESKNYHNLRNRRSVEEL 785
V + L+ + +N R++ + V S S + ES ++ + R
Sbjct: 72 VGFDKLSTD---EKNGFLRKLQ--MLTVGSKKSSKVDESTPSPANRLLKKIVPSRRTSTE 126
Query: 786 PPRRSSRLRDF 818
P S+R+ F
Sbjct: 127 HPNSSNRMHIF 137
>U88167-7|AAB42229.1| 378|Caenorhabditis elegans Hypothetical
protein D2092.2 protein.
Length = 378
Score = 29.1 bits (62), Expect = 6.4
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKP-TAEVAPEVVRQSPSKR 581
SP P+ P R+P SPS +P A A +PK P ++ +P + QSP K
Sbjct: 283 SPDPPSFVLPTARSPINTSPS-SSP---KASSPKASSPKAASPVSSPKSPVIQDQSPKKE 338
Query: 582 PA 587
A
Sbjct: 339 DA 340
>U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical
protein C32D5.10 protein.
Length = 610
Score = 29.1 bits (62), Expect = 6.4
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 579 RPALKSNLSVKLEDLTANFESLRNARNRRIDYTLRDVTSTNSQIIIESV-NGVESKNYHN 755
R L S LSV+L+ L A + + N YTL DV + II + + +E + +
Sbjct: 230 RAVLHSFLSVELKSLPAKTQPRVDNENSWYFYTLHDVAEGKDEEIINRIFSMIEDRGTRD 289
Query: 756 LRNRRSVE 779
L N R V+
Sbjct: 290 L-NAREVD 296
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 28.7 bits (61), Expect = 8.4
Identities = 16/68 (23%), Positives = 27/68 (39%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRP 584
SPA K + KSP R S+ +SP+R+P+ + + + +P
Sbjct: 88 SPAPKRSKETRESESPEKSPVRSRSPRRSSARSPSRSPRRRRERSSERKQSEEPAPLPEK 147
Query: 585 ALKSNLSV 608
K L +
Sbjct: 148 KKKEPLDI 155
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 28.7 bits (61), Expect = 8.4
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPS 575
+P PA SP+ +P+ SPS +P+ S P E P V P + PS
Sbjct: 356 APQEPAHPSPSYPSPSYPSPSYPSPSYPSPSYPSPSYPAE--PAYSVPPPAKPEQPS 410
>Z50756-4|CAA90639.1| 482|Caenorhabditis elegans Hypothetical
protein T08D10.1 protein.
Length = 482
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSP 506
S H A S +Q TPT+ +PS+ TP + S ++P
Sbjct: 88 SQTHQA--SVSQTTPTQTTPSQYTPASVSTARAP 119
>Z50741-5|CAA90612.1| 482|Caenorhabditis elegans Hypothetical
protein T08D10.1 protein.
Length = 482
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSP 506
S H A S +Q TPT+ +PS+ TP + S ++P
Sbjct: 88 SQTHQA--SVSQTTPTQTTPSQYTPASVSTARAP 119
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 28.7 bits (61), Expect = 8.4
Identities = 16/68 (23%), Positives = 27/68 (39%)
Frame = +3
Query: 405 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRP 584
SPA K + KSP R S+ +SP+R+P+ + + + +P
Sbjct: 88 SPAPKRSKETRESESPEKSPVRSRSPRRSSARSPSRSPRRRRERSSERKQSEEPAPLPEK 147
Query: 585 ALKSNLSV 608
K L +
Sbjct: 148 KKKEPLDI 155
>AF045646-10|AAU05566.1| 548|Caenorhabditis elegans Skp1 related
(ubiquitin ligasecomplex component) protein 18, isoform
b protein.
Length = 548
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 717 ESVNGVESKNYHNLRNRRSVEELPPRRSSRLRDFIDKFEHD 839
E+ N S H ++NR+ VEE+ S +RD +F+ D
Sbjct: 25 EAANKKPSVEIHKMKNRQKVEEVASLPSKVVRDQAARFQID 65
>AF045646-9|AAL32223.1| 660|Caenorhabditis elegans Skp1 related
(ubiquitin ligasecomplex component) protein 18, isoform
a protein.
Length = 660
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 717 ESVNGVESKNYHNLRNRRSVEELPPRRSSRLRDFIDKFEHD 839
E+ N S H ++NR+ VEE+ S +RD +F+ D
Sbjct: 25 EAANKKPSVEIHKMKNRQKVEEVASLPSKVVRDQAARFQID 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,929,753
Number of Sequences: 27780
Number of extensions: 398376
Number of successful extensions: 1791
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1700
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3213813064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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