Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_B09
         (1177 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    26   0.74 
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    24   2.3  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    24   3.0  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    23   3.9  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   3.9  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   9.1  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   9.1  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 25.8 bits (54), Expect = 0.74
 Identities = 20/58 (34%), Positives = 29/58 (50%)
 Frame = -1

Query: 445 VLWLGDFLAGCAGDTFLARGEFFRLLAGERDGETLFLVCTGLVSRTLNLILPLRVDIL 272
           VLW G +LA  +G T+   G+ ++  A       L  +  GLV    +L  P R+DIL
Sbjct: 230 VLWWG-WLAFNSGSTYGVSGQRWQYAARAAISTMLASMGGGLVGLGFSLNGPDRIDIL 286


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
 Frame = +3

Query: 480 TNFSARKSPARAPKEVKPTAEVA---PEVVRQSPSKRPALKSNLSVKLE 617
           TN      PAR  +E KP AE     P  + Q     P L+     K E
Sbjct: 21  TNLDPPTRPARLRREAKPEAEPGNNRPIYIPQPRPPHPRLRREAEPKAE 69


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 8/24 (33%), Positives = 18/24 (75%)
 Frame = +1

Query: 415 ILLKNRPTKELQQESRLAEKPQPI 486
           IL  +RP+ + ++E++ ++KP P+
Sbjct: 343 ILRMSRPSDKEEREAQKSQKPSPV 366


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +3

Query: 684 DVTSTNSQIIIESVNGVESKNYHNLRNRRSVEELPPRR 797
           D +S + Q+II   NG+++   H + +   ++  P  R
Sbjct: 255 DESSPHDQVIIGGSNGLDTSKVHIIDSICGIDSKPDYR 292


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 663 VCYEHCVGFQNWQSNLLV*QTN 598
           VC E+C G+Q +   L V Q N
Sbjct: 163 VCLENCTGYQQYLRLLEVPQIN 184


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 478 GVFRLGDFLVGVLWLGDFLAGCAGDTF 398
           G+ R+G+  +  L + D   GC   TF
Sbjct: 55  GLRRIGNLFLASLAIADLFVGCLVMTF 81


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 12/35 (34%), Positives = 13/35 (37%)
 Frame = +3

Query: 480 TNFSARKSPARAPKEVKPTAEVAPEVVRQSPSKRP 584
           TN      P R  +E KP AE         P  RP
Sbjct: 20  TNLDPPTRPTRLRREAKPEAEPGNNRPVYIPQPRP 54


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 254,841
Number of Sequences: 438
Number of extensions: 5069
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 40006332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)