Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_B07
(1196 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0780 - 20500344-20500655 136 4e-32
09_06_0213 - 21610887-21611198 136 4e-32
09_04_0227 + 15861410-15861721 136 4e-32
07_03_0825 + 21773710-21774021 136 4e-32
05_05_0150 + 22758060-22758371 136 4e-32
05_05_0128 - 22591720-22592031 136 4e-32
04_04_0926 - 29462363-29462674 136 4e-32
03_01_0134 + 1060551-1060862 136 4e-32
02_05_0333 - 28012829-28013140 136 4e-32
01_06_1262 + 35833882-35834193 136 4e-32
05_05_0130 - 22598744-22599043,22599296-22599307 115 9e-26
01_02_0078 - 10894871-10895841,10897268-10898426 29 5.5
05_04_0209 - 19073147-19074041,19074117-19074163,19074258-190744... 29 7.2
05_07_0055 - 27374028-27374080,27374205-27374295,27374930-273754... 29 9.6
>10_08_0780 - 20500344-20500655
Length = 103
Score = 136 bits (328), Expect = 4e-32
Identities = 66/80 (82%), Positives = 72/80 (90%)
Frame = +3
Query: 171 AKRHRQVLRXHIQGITQPALRRLARXGGVKRISGLIYAAPRGVLKVFLENVIRXAVTYTE 350
AKRHR+VLR +IQGIT+PA+RRLAR GGVKRISGLIY RGVLK+FLENVIR AVTYTE
Sbjct: 16 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTE 75
Query: 351 HAKXKXVTAMDVVYALKRQG 410
HA+ K VTAMDVVYALKRQG
Sbjct: 76 HARRKTVTAMDVVYALKRQG 95
>09_06_0213 - 21610887-21611198
Length = 103
Score = 136 bits (328), Expect = 4e-32
Identities = 66/80 (82%), Positives = 72/80 (90%)
Frame = +3
Query: 171 AKRHRQVLRXHIQGITQPALRRLARXGGVKRISGLIYAAPRGVLKVFLENVIRXAVTYTE 350
AKRHR+VLR +IQGIT+PA+RRLAR GGVKRISGLIY RGVLK+FLENVIR AVTYTE
Sbjct: 16 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTE 75
Query: 351 HAKXKXVTAMDVVYALKRQG 410
HA+ K VTAMDVVYALKRQG
Sbjct: 76 HARRKTVTAMDVVYALKRQG 95
>09_04_0227 + 15861410-15861721
Length = 103
Score = 136 bits (328), Expect = 4e-32
Identities = 66/80 (82%), Positives = 72/80 (90%)
Frame = +3
Query: 171 AKRHRQVLRXHIQGITQPALRRLARXGGVKRISGLIYAAPRGVLKVFLENVIRXAVTYTE 350
AKRHR+VLR +IQGIT+PA+RRLAR GGVKRISGLIY RGVLK+FLENVIR AVTYTE
Sbjct: 16 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTE 75
Query: 351 HAKXKXVTAMDVVYALKRQG 410
HA+ K VTAMDVVYALKRQG
Sbjct: 76 HARRKTVTAMDVVYALKRQG 95
>07_03_0825 + 21773710-21774021
Length = 103
Score = 136 bits (328), Expect = 4e-32
Identities = 66/80 (82%), Positives = 72/80 (90%)
Frame = +3
Query: 171 AKRHRQVLRXHIQGITQPALRRLARXGGVKRISGLIYAAPRGVLKVFLENVIRXAVTYTE 350
AKRHR+VLR +IQGIT+PA+RRLAR GGVKRISGLIY RGVLK+FLENVIR AVTYTE
Sbjct: 16 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTE 75
Query: 351 HAKXKXVTAMDVVYALKRQG 410
HA+ K VTAMDVVYALKRQG
Sbjct: 76 HARRKTVTAMDVVYALKRQG 95
>05_05_0150 + 22758060-22758371
Length = 103
Score = 136 bits (328), Expect = 4e-32
Identities = 66/80 (82%), Positives = 72/80 (90%)
Frame = +3
Query: 171 AKRHRQVLRXHIQGITQPALRRLARXGGVKRISGLIYAAPRGVLKVFLENVIRXAVTYTE 350
AKRHR+VLR +IQGIT+PA+RRLAR GGVKRISGLIY RGVLK+FLENVIR AVTYTE
Sbjct: 16 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTE 75
Query: 351 HAKXKXVTAMDVVYALKRQG 410
HA+ K VTAMDVVYALKRQG
Sbjct: 76 HARRKTVTAMDVVYALKRQG 95
>05_05_0128 - 22591720-22592031
Length = 103
Score = 136 bits (328), Expect = 4e-32
Identities = 66/80 (82%), Positives = 72/80 (90%)
Frame = +3
Query: 171 AKRHRQVLRXHIQGITQPALRRLARXGGVKRISGLIYAAPRGVLKVFLENVIRXAVTYTE 350
AKRHR+VLR +IQGIT+PA+RRLAR GGVKRISGLIY RGVLK+FLENVIR AVTYTE
Sbjct: 16 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTE 75
Query: 351 HAKXKXVTAMDVVYALKRQG 410
HA+ K VTAMDVVYALKRQG
Sbjct: 76 HARRKTVTAMDVVYALKRQG 95
>04_04_0926 - 29462363-29462674
Length = 103
Score = 136 bits (328), Expect = 4e-32
Identities = 66/80 (82%), Positives = 72/80 (90%)
Frame = +3
Query: 171 AKRHRQVLRXHIQGITQPALRRLARXGGVKRISGLIYAAPRGVLKVFLENVIRXAVTYTE 350
AKRHR+VLR +IQGIT+PA+RRLAR GGVKRISGLIY RGVLK+FLENVIR AVTYTE
Sbjct: 16 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTE 75
Query: 351 HAKXKXVTAMDVVYALKRQG 410
HA+ K VTAMDVVYALKRQG
Sbjct: 76 HARRKTVTAMDVVYALKRQG 95
>03_01_0134 + 1060551-1060862
Length = 103
Score = 136 bits (328), Expect = 4e-32
Identities = 66/80 (82%), Positives = 72/80 (90%)
Frame = +3
Query: 171 AKRHRQVLRXHIQGITQPALRRLARXGGVKRISGLIYAAPRGVLKVFLENVIRXAVTYTE 350
AKRHR+VLR +IQGIT+PA+RRLAR GGVKRISGLIY RGVLK+FLENVIR AVTYTE
Sbjct: 16 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTE 75
Query: 351 HAKXKXVTAMDVVYALKRQG 410
HA+ K VTAMDVVYALKRQG
Sbjct: 76 HARRKTVTAMDVVYALKRQG 95
>02_05_0333 - 28012829-28013140
Length = 103
Score = 136 bits (328), Expect = 4e-32
Identities = 66/80 (82%), Positives = 72/80 (90%)
Frame = +3
Query: 171 AKRHRQVLRXHIQGITQPALRRLARXGGVKRISGLIYAAPRGVLKVFLENVIRXAVTYTE 350
AKRHR+VLR +IQGIT+PA+RRLAR GGVKRISGLIY RGVLK+FLENVIR AVTYTE
Sbjct: 16 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTE 75
Query: 351 HAKXKXVTAMDVVYALKRQG 410
HA+ K VTAMDVVYALKRQG
Sbjct: 76 HARRKTVTAMDVVYALKRQG 95
>01_06_1262 + 35833882-35834193
Length = 103
Score = 136 bits (328), Expect = 4e-32
Identities = 66/80 (82%), Positives = 72/80 (90%)
Frame = +3
Query: 171 AKRHRQVLRXHIQGITQPALRRLARXGGVKRISGLIYAAPRGVLKVFLENVIRXAVTYTE 350
AKRHR+VLR +IQGIT+PA+RRLAR GGVKRISGLIY RGVLK+FLENVIR AVTYTE
Sbjct: 16 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTE 75
Query: 351 HAKXKXVTAMDVVYALKRQG 410
HA+ K VTAMDVVYALKRQG
Sbjct: 76 HARRKTVTAMDVVYALKRQG 95
>05_05_0130 - 22598744-22599043,22599296-22599307
Length = 103
Score = 115 bits (276), Expect = 9e-26
Identities = 56/80 (70%), Positives = 64/80 (80%)
Frame = +3
Query: 171 AKRHRQVLRXHIQGITQPALRRLARXGGVKRISGLIYAAPRGVLKVFLENVIRXAVTYTE 350
A+RHR V R +IQGI +P +RRLAR GGVKRISGLIY RGVL++FL+NVI A+TYTE
Sbjct: 16 ARRHRIVFRGYIQGIAKPVIRRLARKGGVKRISGLIYKETRGVLEIFLKNVICDAITYTE 75
Query: 351 HAKXKXVTAMDVVYALKRQG 410
HA K V AMDVVYALK QG
Sbjct: 76 HAHRKTVMAMDVVYALKLQG 95
>01_02_0078 - 10894871-10895841,10897268-10898426
Length = 709
Score = 29.5 bits (63), Expect = 5.5
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 290 PRRSQSVPRKRDPRRCH--IHRTRQXEXRHRYGCCVRSETPRSHPXTVSAV 436
P + PR+R RR H I R R+ + RH G VR + + V AV
Sbjct: 560 PSALTAAPRRRQIRRVHVRIRRARRCQARHAVGELVRRQARHAVGEIVRAV 610
>05_04_0209 -
19073147-19074041,19074117-19074163,19074258-19074437,
19074839-19074955,19075105-19075227,19075391-19075776,
19076177-19076303,19077140-19077202,19078035-19078086,
19078189-19080023
Length = 1274
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 255 VKRISGLIYAAPRGVLKVFLENVIRXAVT 341
V R S L+ + P GVL V LENV+ T
Sbjct: 141 VTRYSALLRSPPGGVLSVMLENVVNDKYT 169
>05_07_0055 -
27374028-27374080,27374205-27374295,27374930-27375448,
27375544-27375779,27376363-27376846,27376993-27378282
Length = 890
Score = 28.7 bits (61), Expect = 9.6
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +2
Query: 290 PRRSQSVPRKRDPRRCHIHRTRQXEXRHRYGCCVRSETPR 409
P+ P PRRCH+ T + + R ETPR
Sbjct: 62 PKTRHPTPPPPPPRRCHLLFTMKLSVKRGQAMWSRKETPR 101
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,480,299
Number of Sequences: 37544
Number of extensions: 272027
Number of successful extensions: 704
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3654850728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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