Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_B06
         (1159 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    42   7e-06
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   5.8  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    23   5.8  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   7.7  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   7.7  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 42.3 bits (95), Expect = 7e-06
 Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
 Frame = +1

Query: 565 NINILDLSHNNITKLNHELDRLTE--VVTLDLSTNGIQNLNKFLH-NAKKLVHLNLANNR 735
           NI +LDLS NNIT +  +  R  E  ++ L L  N + N  K L  N   L  L+L++N 
Sbjct: 224 NIKVLDLSFNNITSVAKQFFRPVELSLMQLYLGHNKLLNATKDLFGNMPHLQVLDLSHNS 283

Query: 736 IKELAMSHL--PASVSSLDLTNNLLRDVPSDL-GHLTSLEHLELEGNPLDCSCENI 894
           + EL          +  LD ++N + ++P+DL   L +L  ++   N L    +N+
Sbjct: 284 LYELDFDTFRNTKKLQWLDTSHNRISEIPNDLFRFLGNLRIVDFSHNRLRSLPDNL 339



 Score = 41.9 bits (94), Expect = 9e-06
 Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
 Frame = +1

Query: 577  LDLSHNNITKLNHELDRLT----EVVTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKE 744
            L+L HN+  +L  E++ L+    E   L L+ + +        +   L+ L+LA N +  
Sbjct: 423  LNLGHNS--QLTLEINGLSFQGLEYTLLHLNLDNVSLSQVPALSTPNLLSLSLAFNSLPT 480

Query: 745  LAMSHLPASVSSLDLTN---NLLRDVPSDLGHLTSLEHLELEGNPLDCSCENILL----- 900
            +A+  +  ++SSL   N   N L  VP     LT L HL LEGNP+       LL     
Sbjct: 481  VALE-VAGNISSLRYLNLDYNDLSAVPIVTHSLTELRHLSLEGNPITTLSNTSLLGAANQ 539

Query: 901  RDRLIIANVVIDNVKCSLPTKLKGQSWLELKTKDIVISKN*TSVLKXNDG 1050
             + L + N+ +  ++     K++    L++     + + N  S+L+ NDG
Sbjct: 540  LEELNLKNIDLTVLESGAFCKMQPLRTLKIGVYRNIKNFNIPSILQFNDG 589



 Score = 32.7 bits (71), Expect = 0.005
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
 Frame = +1

Query: 577 LDLSHNNITKLNH--ELDRLTEVVTLDLSTNGIQNLNK-FLHNAKKLVHLNLANN----- 732
           LDLS N+I+ L+H  +L R   +  LDLS N +  ++        +L  LNL +N     
Sbjct: 374 LDLSWNSISSLSHGGQLARFKCLSWLDLSYNRLGQIDAGTFKGIPRLASLNLGHNSQLTL 433

Query: 733 RIKELAMSHLPASVSSLDLTNNLLRDVPS 819
            I  L+   L  ++  L+L N  L  VP+
Sbjct: 434 EINGLSFQGLEYTLLHLNLDNVSLSQVPA 462



 Score = 30.7 bits (66), Expect = 0.022
 Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +1

Query: 772 VSSLDLTNNLLRDVPSDLGH-LTSLEHLELEGNPLD 876
           +  LDL+NN LR+VP +  H L SL+ + L+ N ++
Sbjct: 44  LEELDLSNNRLRNVPDNSFHFLRSLKKVHLQDNTIE 79



 Score = 30.7 bits (66), Expect = 0.022
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
 Frame = +1

Query: 559 HHNINILDLSHNNITKLN-HELDRLTEVVTLDLSTNGIQNLNK-FLHNAKKLVHLNLANN 732
           H ++  +  S N++  +  H    L ++  + L  N I++L +    N K L  LNL  N
Sbjct: 91  HRDLTEVYFSFNSVRNVQQHTFADLIQLEQIHLDDNRIESLERRAFMNLKSLKRLNLKGN 150

Query: 733 RIKELA---MSHLPASVSSLDLTNN 798
           +I  +A     +LP  +  LDL  N
Sbjct: 151 KIATIAYETFQNLP-ELEDLDLAYN 174


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 454 LLSWEPLVVTPPGNTRKQESTSSCQHLEDVISCIESFP 341
           L+ W  L+  P   T+K  +   C   E +I C++S P
Sbjct: 226 LVPWA-LMEQPLAQTKKLATIVGCGTDETMIKCLKSRP 262


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 454 LLSWEPLVVTPPGNTRKQESTSSCQHLEDVISCIESFP 341
           L+ W  L+  P   T+K  +   C   E +I C++S P
Sbjct: 226 LVPWA-LMEQPLAQTKKLATIVGCGTDETMIKCLKSRP 262


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 896 KMFSQEQSNGFP 861
           KMF+QEQ+N  P
Sbjct: 6   KMFNQEQNNNVP 17


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 454 LLSWEPLVVTPPGNTRKQESTSSCQHLEDVISCIESFP 341
           L+ W  L+  P   T+K  +   C   E +I C++S P
Sbjct: 226 LVPWA-LMEQPLAQTKKLATIVGCGTDETMIRCLKSRP 262


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 248,342
Number of Sequences: 336
Number of extensions: 5209
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 33712719
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)