Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_B05
(1220 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9BXS5 Cluster: AP-1 complex subunit mu-1; n=137; Eukar... 81 6e-14
UniRef50_Q7RKU6 Cluster: Clathrin coat assembly protein ap54; n=... 64 7e-09
UniRef50_A5E396 Cluster: AP-1 complex subunit mu-1; n=6; Sacchar... 55 4e-06
UniRef50_Q4N7V8 Cluster: Clathrin medium chain, putative; n=6; A... 52 2e-05
UniRef50_Q22B93 Cluster: Adaptor complexes medium subunit family... 50 9e-05
UniRef50_A5C9L9 Cluster: Putative uncharacterized protein; n=1; ... 49 3e-04
UniRef50_Q4RB56 Cluster: Chromosome undetermined SCAF22239, whol... 45 0.003
UniRef50_Q00776 Cluster: AP-1 complex subunit mu-1 (Mu(1)-adapti... 44 0.006
UniRef50_A2FR45 Cluster: Mu adaptin, putative; n=1; Trichomonas ... 43 0.014
UniRef50_UPI0000D67F79 Cluster: PREDICTED: similar to Chain M, A... 39 0.30
UniRef50_Q96CW1 Cluster: AP-2 complex subunit mu-1; n=94; Fungi/... 38 0.40
UniRef50_Q3E8F7 Cluster: Uncharacterized protein At5g46630.2; n=... 38 0.70
UniRef50_Q9SGX7 Cluster: F20B24.16; n=4; Magnoliophyta|Rep: F20B... 37 0.92
UniRef50_Q4QBN3 Cluster: Adaptor complex AP-1 medium subunit, pu... 37 0.92
UniRef50_A6SRP2 Cluster: Putative uncharacterized protein; n=1; ... 36 1.6
UniRef50_A5K4K8 Cluster: Adapter-related protein complex 4 mu 1 ... 36 2.1
UniRef50_Q7RAH7 Cluster: Clathrin coat assembly protein ap50; n=... 34 6.5
>UniRef50_Q9BXS5 Cluster: AP-1 complex subunit mu-1; n=137;
Eukaryota|Rep: AP-1 complex subunit mu-1 - Homo sapiens
(Human)
Length = 423
Score = 81.0 bits (191), Expect = 6e-14
Identities = 41/107 (38%), Positives = 58/107 (54%)
Frame = +3
Query: 144 MSSSGIYILDVXGKVXISRNYRGDVDLGVIXKXXXXXXXXXXXXXXXXXXQXSECTXVYI 323
MS+S +Y+LD+ GKV I RNYRGDVD+ + ++I
Sbjct: 1 MSASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLSPILAHGGVRFMWI 60
Query: 324 KXNXXYIVSRTKKNAXIXXVXVFLYRIVEVXXEXFKKLEEEXX*DTW 464
K N Y+V+ +KKNA + V FLY++V+V E FK+LEEE D +
Sbjct: 61 KHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNF 107
>UniRef50_Q7RKU6 Cluster: Clathrin coat assembly protein ap54; n=8;
Eukaryota|Rep: Clathrin coat assembly protein ap54 -
Plasmodium yoelii yoelii
Length = 459
Score = 64.1 bits (149), Expect = 7e-09
Identities = 33/104 (31%), Positives = 55/104 (52%)
Frame = +3
Query: 153 SGIYILDVXGKVXISRNYRGDVDLGVIXKXXXXXXXXXXXXXXXXXXQXSECTXVYIKXN 332
S I+I+D+ GKV ISRNYRG+++ ++ + + T ++ N
Sbjct: 5 SAIFIIDLKGKVIISRNYRGEINANLL-EVFYNCVIDQEDNLIKPIFHVNGITYCWVAYN 63
Query: 333 XXYIVSRTKKNAXIXXVXVFLYRIVEVXXEXFKKLEEEXX*DTW 464
YI++ TKKN+ + FLY++++V + FK LEEE D +
Sbjct: 64 NIYILAITKKNSNATLIITFLYKLIQVLKDYFKVLEEESIKDNF 107
>UniRef50_A5E396 Cluster: AP-1 complex subunit mu-1; n=6;
Saccharomycetales|Rep: AP-1 complex subunit mu-1 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 445
Score = 54.8 bits (126), Expect = 4e-06
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Frame = +3
Query: 150 SSGIYILDVXGKVXISRNYRGDVDLGVIXK---XXXXXXXXXXXXXXXXXXQXSECTXVY 320
+S I+ LD+ GK +SR+Y+GD+ I K ++
Sbjct: 2 ASQIHFLDIKGKPLLSRDYKGDIPPNTIEKFPMLLLELENTIDDGEYKPFINDQGINYIF 61
Query: 321 IKXNXXYIVSRTKKNAXIXXVXVFLYRIVEVXXEXFKKLEEEXX*DTW 464
I N YI + T+KN I + +FL ++++V + FK LEEE D +
Sbjct: 62 INHNNLYICALTRKNENIMTIIIFLSKMIDVMTQYFKSLEEESIRDNF 109
>UniRef50_Q4N7V8 Cluster: Clathrin medium chain, putative; n=6;
Alveolata|Rep: Clathrin medium chain, putative -
Theileria parva
Length = 452
Score = 52.4 bits (120), Expect = 2e-05
Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
Frame = +3
Query: 111 IYLXYSRNWXTMSS---SGIYILDVXGKVXISRNYRGDVDLGVIXKXXXXXXXXXXXXXX 281
+YL +RN + + SGIYILD+ G++ I RNY+ D+ L +
Sbjct: 6 VYLRVTRNNSSHNMGGISGIYILDLKGRLIICRNYKADL-LTNVCDAFYENVILQDSSTL 64
Query: 282 XXXXQXSECTXVYIKXNXXYIVSRTKKNAXIXXVXVFLYRIVEVXXEXFKKLEEEXX*DT 461
CT ++ N Y ++ N + FLYR V V FK L EE D
Sbjct: 65 KPVFHSDGCTFSWVSQNGIYFIAVASSNYNVSLSISFLYRFVGVLTSYFKHLNEESIRDN 124
Query: 462 W 464
+
Sbjct: 125 F 125
>UniRef50_Q22B93 Cluster: Adaptor complexes medium subunit family
protein; n=3; Tetrahymena thermophila|Rep: Adaptor
complexes medium subunit family protein - Tetrahymena
thermophila SB210
Length = 444
Score = 50.4 bits (115), Expect = 9e-05
Identities = 29/104 (27%), Positives = 48/104 (46%)
Frame = +3
Query: 153 SGIYILDVXGKVXISRNYRGDVDLGVIXKXXXXXXXXXXXXXXXXXXQXSECTXVYIKXN 332
S IYILD G+V I+R Y+GD+ + + + Y+ N
Sbjct: 10 SAIYILDHKGRVLITRCYKGDLPINIHDIFNKKLLEYDEFSVKPILRDKYGHSFFYLHHN 69
Query: 333 XXYIVSRTKKNAXIXXVXVFLYRIVEVXXEXFKKLEEEXX*DTW 464
++ ++KN V FLY++++V + FK+LEEE D +
Sbjct: 70 NLIFLAISRKNTNCMMVFSFLYQLIQVLVDYFKELEEESVRDNF 113
>UniRef50_A5C9L9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 230
Score = 48.8 bits (111), Expect = 3e-04
Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Frame = +3
Query: 147 SSSGIYILDVXGKVXISRNYRGDVDLGVIXKXXXXXXXXXXXXXXXXXXQXSE-CTXVYI 323
++S +++LD+ G+V + R+YRGDV + T ++I
Sbjct: 4 AASALFLLDIKGRVLVWRDYRGDVSAVQAERFFAKLMEKEGDPESQDPVVYDNGVTYMFI 63
Query: 324 KXNXXYIVSRTKKNAXIXXVXVFLYRIVEVXXEXFKKLEEEXX*DTW 464
+ N ++++ +++N +FL+R+V+V F++LEEE D +
Sbjct: 64 QHNNVFLMTASRQNCNAASHLLFLHRVVDVFKHYFEELEEESLRDNF 110
>UniRef50_Q4RB56 Cluster: Chromosome undetermined SCAF22239, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF22239, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 69
Score = 45.2 bits (102), Expect = 0.003
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3
Query: 144 MSSSGIYILDVXGKVXISRNYRGDVDLGVI 233
MS+S +Y+LD+ GKV + RNYRGDVD+ I
Sbjct: 1 MSASAVYVLDLKGKVLVCRNYRGDVDMSEI 30
>UniRef50_Q00776 Cluster: AP-1 complex subunit mu-1 (Mu(1)-adaptin);
n=5; Saccharomycetales|Rep: AP-1 complex subunit mu-1
(Mu(1)-adaptin) - Saccharomyces cerevisiae (Baker's
yeast)
Length = 475
Score = 44.4 bits (100), Expect = 0.006
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = +3
Query: 150 SSGIYILDVXGKVXISRNYRGDVDLGVIXKXXXXXXXXXXXXXXXXXX-QXSECTXVYIK 326
+S +Y D GK +SR YR D+ L I K + ++I+
Sbjct: 2 ASAVYFCDHNGKPLLSRRYRDDIPLSAIDKFPILLSDLEEQSNLIPPCLNHNGLEYLFIQ 61
Query: 327 XNXXYIVSR-TKKNAXIXXVXVFLYRIVEVXXEXFKKLEEEXX*DTW 464
N Y+V+ T +A + FL+++VEV + K +EEE D +
Sbjct: 62 HNDLYVVAIVTSLSANAAAIFTFLHKLVEVLSDYLKTVEEESIRDNF 108
>UniRef50_A2FR45 Cluster: Mu adaptin, putative; n=1; Trichomonas
vaginalis G3|Rep: Mu adaptin, putative - Trichomonas
vaginalis G3
Length = 426
Score = 43.2 bits (97), Expect = 0.014
Identities = 26/104 (25%), Positives = 46/104 (44%)
Frame = +3
Query: 153 SGIYILDVXGKVXISRNYRGDVDLGVIXKXXXXXXXXXXXXXXXXXXQXSECTXVYIKXN 332
S +YILD G++ I+ +YRG+VD+ + K C YI+ +
Sbjct: 2 SAVYILDSKGRILINFDYRGEVDMSIPDKFMAHIQSNDKILPNPVFRVDDWC-FAYIERS 60
Query: 333 XXYIVSRTKKNAXIXXVXVFLYRIVEVXXEXFKKLEEEXX*DTW 464
Y+++ T+ N+ + + FL +V+V L E D +
Sbjct: 61 GLYLLTVTRTNSNVTLLLTFLSSLVKVFEYYLGTLSAETIIDNF 104
>UniRef50_UPI0000D67F79 Cluster: PREDICTED: similar to Chain M, Ap2
Clathrin Adaptor Core; n=2; Eutheria|Rep: PREDICTED:
similar to Chain M, Ap2 Clathrin Adaptor Core - Mus
musculus
Length = 230
Score = 38.7 bits (86), Expect = 0.30
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Frame = +3
Query: 156 GIYILDVXGKVXISRNYRGDVDLGVIXKXXXXXXXXXXXXXXXXXXQXSECTXV-YIKXN 332
G++I + G+V ISR YR D+ + CT Y+K +
Sbjct: 4 GLFIYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQARSPVTN--IACTSFFYVKWS 61
Query: 333 XXYIVSRTKKNAXIXXVXVFLYRIVEVXXEXFKKLEEE 446
++ + TK+N V FLY++ ++ F K+ EE
Sbjct: 62 NIWLAAVTKQNVNAAMVIEFLYKMCDIMAAYFGKISEE 99
>UniRef50_Q96CW1 Cluster: AP-2 complex subunit mu-1; n=94;
Fungi/Metazoa group|Rep: AP-2 complex subunit mu-1 -
Homo sapiens (Human)
Length = 435
Score = 38.3 bits (85), Expect = 0.40
Identities = 23/97 (23%), Positives = 42/97 (43%)
Frame = +3
Query: 156 GIYILDVXGKVXISRNYRGDVDLGVIXKXXXXXXXXXXXXXXXXXXQXSECTXVYIKXNX 335
G++I + G+V ISR YR D+ + + + ++K +
Sbjct: 4 GLFIYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVT-NIARTSFFHVKRSN 62
Query: 336 XYIVSRTKKNAXIXXVXVFLYRIVEVXXEXFKKLEEE 446
++ + TK+N V FLY++ +V F K+ EE
Sbjct: 63 IWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEE 99
>UniRef50_Q3E8F7 Cluster: Uncharacterized protein At5g46630.2; n=17;
Viridiplantae|Rep: Uncharacterized protein At5g46630.2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 441
Score = 37.5 bits (83), Expect = 0.70
Identities = 25/95 (26%), Positives = 39/95 (41%)
Frame = +3
Query: 144 MSSSGIYILDVXGKVXISRNYRGDVDLGVIXKXXXXXXXXXXXXXXXXXXQXSECTXVYI 323
+++S IY L++ G V I+R YR DV G + Q C+ VY+
Sbjct: 3 VAASAIYFLNLRGDVLINRTYRDDVG-GNMVDAFRTHIMQTKELGNCPVRQIGGCSFVYM 61
Query: 324 KXNXXYIVSRTKKNAXIXXVXVFLYRIVEVXXEXF 428
+ + YIV NA + F+ V + F
Sbjct: 62 RISNVYIVIVVSSNANVACGFKFVVEAVALFKSYF 96
>UniRef50_Q9SGX7 Cluster: F20B24.16; n=4; Magnoliophyta|Rep:
F20B24.16 - Arabidopsis thaliana (Mouse-ear cress)
Length = 411
Score = 37.1 bits (82), Expect = 0.92
Identities = 18/89 (20%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +3
Query: 147 SSSGIYILDVXGKVXISRNYRGDVDLGVIXKXXXXXXXXXXXXXXXXXXQXSE-CTXVYI 323
++S +++LD+ G+V + R+YRGDV + T +++
Sbjct: 4 AASALFLLDIKGRVLVWRDYRGDVTAAQAERFFTKLIETEGDSQSNDPVAYDNGVTYMFV 63
Query: 324 KXNXXYIVSRTKKNAXIXXVXVFLYRIVE 410
+ + Y++ +++N + FL+R+V+
Sbjct: 64 QHSNIYLMIASRQNCNAASLLFFLHRVVD 92
>UniRef50_Q4QBN3 Cluster: Adaptor complex AP-1 medium subunit,
putative; n=8; Trypanosomatidae|Rep: Adaptor complex
AP-1 medium subunit, putative - Leishmania major
Length = 433
Score = 37.1 bits (82), Expect = 0.92
Identities = 28/105 (26%), Positives = 41/105 (39%)
Frame = +3
Query: 150 SSGIYILDVXGKVXISRNYRGDVDLGVIXKXXXXXXXXXXXXXXXXXXQXSECTXVYIKX 329
+S +YILD G I R+YRGDV V + T +++
Sbjct: 2 ASVLYILDSKGSPLIYRSYRGDVSQDV-PSVFQQRVIDEEESRITPVFEEQGHTYTFVRE 60
Query: 330 NXXYIVSRTKKNAXIXXVXVFLYRIVEVXXEXFKKLEEEXX*DTW 464
N Y++ + NA FL R V V FK + +E D +
Sbjct: 61 NDVYLLMVSTINACSLQQVAFLRRCVSVFNAYFKTVTQETVRDNF 105
>UniRef50_A6SRP2 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 70
Score = 36.3 bits (80), Expect = 1.6
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +3
Query: 150 SSGIYILDVXGKVXISRNYRGDVDLGVIXK 239
+S ++ LD+ GK ++RNYRGD+ + + K
Sbjct: 2 ASAVFFLDLKGKTLLARNYRGDIPMSAVEK 31
>UniRef50_A5K4K8 Cluster: Adapter-related protein complex 4 mu 1
subunit, putative; n=6; Plasmodium|Rep: Adapter-related
protein complex 4 mu 1 subunit, putative - Plasmodium
vivax
Length = 496
Score = 35.9 bits (79), Expect = 2.1
Identities = 26/101 (25%), Positives = 40/101 (39%)
Frame = +3
Query: 144 MSSSGIYILDVXGKVXISRNYRGDVDLGVIXKXXXXXXXXXXXXXXXXXXQXSECTXVYI 323
M S YIL G I+R++RGDV G + + Y+
Sbjct: 1 MVVSQFYILSPRGDTIINRDFRGDVSKGS-GEMFFRNVKLHKGGDAPPLFYLNGIHFTYL 59
Query: 324 KXNXXYIVSRTKKNAXIXXVXVFLYRIVEVXXEXFKKLEEE 446
K N Y V + N+ V LYR+V++ + ++ EE
Sbjct: 60 KNNSLYFVFTSLLNSSPSYVLELLYRVVKIVKDFCGQINEE 100
>UniRef50_Q7RAH7 Cluster: Clathrin coat assembly protein ap50; n=5;
Plasmodium (Vinckeia)|Rep: Clathrin coat assembly
protein ap50 - Plasmodium yoelii yoelii
Length = 601
Score = 34.3 bits (75), Expect = 6.5
Identities = 20/91 (21%), Positives = 37/91 (40%)
Frame = +3
Query: 156 GIYILDVXGKVXISRNYRGDVDLGVIXKXXXXXXXXXXXXXXXXXXQXSECTXVYIKXNX 335
G+YI G++ I RNYR ++ + K + + + + N
Sbjct: 4 GLYIFFANGQLLIQRNYRSMINNNDL-KLYVSKYIKTKRFYEHPIVEINNVFFLNVSINE 62
Query: 336 XYIVSRTKKNAXIXXVXVFLYRIVEVXXEXF 428
I + TK NA + + F+Y+ +E+ F
Sbjct: 63 IVITALTKNNANVCLIFNFIYKFIEILNYFF 93
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 401,304,752
Number of Sequences: 1657284
Number of extensions: 5395428
Number of successful extensions: 5512
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5506
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 123604589072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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