Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_B05
         (1220 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0412 + 29159918-29160046,29160148-29160297,29160385-291604...    50   3e-06
05_06_0262 - 26746180-26746278,26746371-26746493,26746584-267467...    49   9e-06

>01_06_0412 +
           29159918-29160046,29160148-29160297,29160385-29160447,
           29160540-29160716,29160796-29160899,29162142-29162249,
           29162336-29162432,29162540-29162637,29162718-29162859,
           29162941-29163063,29163161-29163259
          Length = 429

 Score = 50.4 bits (115), Expect = 3e-06
 Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
 Frame = +3

Query: 153 SGIYILDVXGKVXISRNYRGDVDLGVIXKXXXXXXXXXXXXXXXXXXQXSEC--TXVYIK 326
           S +++LD+ G+V + R+YRGDV      +                     +   T ++I+
Sbjct: 6   SALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKEGDSEAHSPVVYDDAGVTYMFIQ 65

Query: 327 XNXXYIVSRTKKNAXIXXVXVFLYRIVEVXXEXFKKLEEEXX*DTW 464
            N  ++++ +++N     + +FL+R+V+V    F++LEEE   D +
Sbjct: 66  HNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNF 111


>05_06_0262 -
           26746180-26746278,26746371-26746493,26746584-26746725,
           26746824-26746921,26747012-26747108,26747215-26747322,
           26747900-26748003,26748170-26748268,26748373-26748435,
           26748538-26748687,26748769-26748900
          Length = 404

 Score = 48.8 bits (111), Expect = 9e-06
 Identities = 25/106 (23%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
 Frame = +3

Query: 153 SGIYILDVXGKVXISRNYRGDVDLGVIXKXXXXXXXXXXXXXXXXXXQXSEC--TXVYIK 326
           S +++LD+ G+V + R+YRGDV      +                     +   + ++I+
Sbjct: 7   SALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKESDAEVLSPVVHDDAGVSYMFIQ 66

Query: 327 XNXXYIVSRTKKNAXIXXVXVFLYRIVEVXXEXFKKLEEEXX*DTW 464
            N  ++++ +++N     + +FL+R+V+V    F++LEEE   D +
Sbjct: 67  HNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNF 112


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,897,338
Number of Sequences: 37544
Number of extensions: 149903
Number of successful extensions: 149
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 149
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3747967944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)