Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_B05
(1220 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058621-1|AAL13850.1| 426|Drosophila melanogaster LD31377p pro... 89 2e-17
AJ006219-1|CAA06918.1| 426|Drosophila melanogaster clathrin-ass... 89 2e-17
AF110231-1|AAF14247.1| 426|Drosophila melanogaster clathrin-ass... 89 2e-17
AE014297-967|AAF54399.1| 426|Drosophila melanogaster CG9388-PA ... 89 2e-17
AY070712-1|AAL48183.1| 437|Drosophila melanogaster SD05403p pro... 38 0.021
AJ005962-1|CAA06785.1| 437|Drosophila melanogaster clathrin-ass... 38 0.021
AF110232-1|AAF14248.1| 437|Drosophila melanogaster clathrin-ass... 38 0.021
AE014297-3160|AAF56002.3| 437|Drosophila melanogaster CG7057-PB... 38 0.021
AE014297-3159|AAF56001.1| 437|Drosophila melanogaster CG7057-PA... 38 0.021
AE014297-2547|AAF55570.1| 1194|Drosophila melanogaster CG14304-P... 30 5.6
>AY058621-1|AAL13850.1| 426|Drosophila melanogaster LD31377p
protein.
Length = 426
Score = 88.6 bits (210), Expect = 2e-17
Identities = 52/110 (47%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Frame = +3
Query: 144 MSSSGIYILDVXGKVXISRNYRGD-VDLGVIXKXXXXXXXXXXXXXXXXXXQXSECTXVY 320
MSSS I++LDV GKV ISRNYRGD +D+ VI K Q +E T Y
Sbjct: 1 MSSSAIFVLDVKGKVLISRNYRGDNIDMAVIDKFMPLLMEREEEGLITPILQTAETTFAY 60
Query: 321 IKXNXXYIVSRT--KKNAXIXXVXVFLYRIVEVXXEXFKKLEEEXX*DTW 464
IK N YIVS T KN I V VFL++I +V E FK+LEEE D +
Sbjct: 61 IKTNNLYIVSTTPRNKNVNIALVFVFLHKIAQVFVEYFKELEEESIRDNF 110
>AJ006219-1|CAA06918.1| 426|Drosophila melanogaster
clathrin-associated protein protein.
Length = 426
Score = 88.6 bits (210), Expect = 2e-17
Identities = 52/110 (47%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Frame = +3
Query: 144 MSSSGIYILDVXGKVXISRNYRGD-VDLGVIXKXXXXXXXXXXXXXXXXXXQXSECTXVY 320
MSSS I++LDV GKV ISRNYRGD +D+ VI K Q +E T Y
Sbjct: 1 MSSSAIFVLDVKGKVLISRNYRGDNIDMAVIDKFMPLLMEREEEGLITPILQTAETTFAY 60
Query: 321 IKXNXXYIVSRT--KKNAXIXXVXVFLYRIVEVXXEXFKKLEEEXX*DTW 464
IK N YIVS T KN I V VFL++I +V E FK+LEEE D +
Sbjct: 61 IKTNNLYIVSTTPRNKNVNIALVFVFLHKIAQVFVEYFKELEEESIRDNF 110
>AF110231-1|AAF14247.1| 426|Drosophila melanogaster
clathrin-associated adaptor complexAP-1 medium chain
protein.
Length = 426
Score = 88.6 bits (210), Expect = 2e-17
Identities = 52/110 (47%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Frame = +3
Query: 144 MSSSGIYILDVXGKVXISRNYRGD-VDLGVIXKXXXXXXXXXXXXXXXXXXQXSECTXVY 320
MSSS I++LDV GKV ISRNYRGD +D+ VI K Q +E T Y
Sbjct: 1 MSSSAIFVLDVKGKVLISRNYRGDNIDMAVIDKFMPLLMEREEEGLITPILQTAETTFAY 60
Query: 321 IKXNXXYIVSRT--KKNAXIXXVXVFLYRIVEVXXEXFKKLEEEXX*DTW 464
IK N YIVS T KN I V VFL++I +V E FK+LEEE D +
Sbjct: 61 IKTNNLYIVSTTPRNKNVNIALVFVFLHKIAQVFVEYFKELEEESIRDNF 110
>AE014297-967|AAF54399.1| 426|Drosophila melanogaster CG9388-PA
protein.
Length = 426
Score = 88.6 bits (210), Expect = 2e-17
Identities = 52/110 (47%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Frame = +3
Query: 144 MSSSGIYILDVXGKVXISRNYRGD-VDLGVIXKXXXXXXXXXXXXXXXXXXQXSECTXVY 320
MSSS I++LDV GKV ISRNYRGD +D+ VI K Q +E T Y
Sbjct: 1 MSSSAIFVLDVKGKVLISRNYRGDNIDMAVIDKFMPLLMEREEEGLITPILQTAETTFAY 60
Query: 321 IKXNXXYIVSRT--KKNAXIXXVXVFLYRIVEVXXEXFKKLEEEXX*DTW 464
IK N YIVS T KN I V VFL++I +V E FK+LEEE D +
Sbjct: 61 IKTNNLYIVSTTPRNKNVNIALVFVFLHKIAQVFVEYFKELEEESIRDNF 110
>AY070712-1|AAL48183.1| 437|Drosophila melanogaster SD05403p
protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.021
Identities = 24/97 (24%), Positives = 41/97 (42%)
Frame = +3
Query: 156 GIYILDVXGKVXISRNYRGDVDLGVIXKXXXXXXXXXXXXXXXXXXQXSECTXVYIKXNX 335
G+++ + G+V ISR YR D+ + + + +IK
Sbjct: 4 GLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVT-NIARTSFFHIKRAN 62
Query: 336 XYIVSRTKKNAXIXXVXVFLYRIVEVXXEXFKKLEEE 446
++ + TK+N V FL +I+EV F K+ EE
Sbjct: 63 IWLAAVTKQNVNAAMVFEFLLKIIEVMQSYFGKISEE 99
>AJ005962-1|CAA06785.1| 437|Drosophila melanogaster
clathrin-associated protein protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.021
Identities = 24/97 (24%), Positives = 41/97 (42%)
Frame = +3
Query: 156 GIYILDVXGKVXISRNYRGDVDLGVIXKXXXXXXXXXXXXXXXXXXQXSECTXVYIKXNX 335
G+++ + G+V ISR YR D+ + + + +IK
Sbjct: 4 GLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVT-NIARTSFFHIKRAN 62
Query: 336 XYIVSRTKKNAXIXXVXVFLYRIVEVXXEXFKKLEEE 446
++ + TK+N V FL +I+EV F K+ EE
Sbjct: 63 IWLAAVTKQNVNAAMVFEFLLKIIEVMQSYFGKISEE 99
>AF110232-1|AAF14248.1| 437|Drosophila melanogaster
clathrin-associated adaptor complexAP-2 medium chain
protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.021
Identities = 24/97 (24%), Positives = 41/97 (42%)
Frame = +3
Query: 156 GIYILDVXGKVXISRNYRGDVDLGVIXKXXXXXXXXXXXXXXXXXXQXSECTXVYIKXNX 335
G+++ + G+V ISR YR D+ + + + +IK
Sbjct: 4 GLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVT-NIARTSFFHIKRAN 62
Query: 336 XYIVSRTKKNAXIXXVXVFLYRIVEVXXEXFKKLEEE 446
++ + TK+N V FL +I+EV F K+ EE
Sbjct: 63 IWLAAVTKQNVNAAMVFEFLLKIIEVMQSYFGKISEE 99
>AE014297-3160|AAF56002.3| 437|Drosophila melanogaster CG7057-PB,
isoform B protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.021
Identities = 24/97 (24%), Positives = 41/97 (42%)
Frame = +3
Query: 156 GIYILDVXGKVXISRNYRGDVDLGVIXKXXXXXXXXXXXXXXXXXXQXSECTXVYIKXNX 335
G+++ + G+V ISR YR D+ + + + +IK
Sbjct: 4 GLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVT-NIARTSFFHIKRAN 62
Query: 336 XYIVSRTKKNAXIXXVXVFLYRIVEVXXEXFKKLEEE 446
++ + TK+N V FL +I+EV F K+ EE
Sbjct: 63 IWLAAVTKQNVNAAMVFEFLLKIIEVMQSYFGKISEE 99
>AE014297-3159|AAF56001.1| 437|Drosophila melanogaster CG7057-PA,
isoform A protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.021
Identities = 24/97 (24%), Positives = 41/97 (42%)
Frame = +3
Query: 156 GIYILDVXGKVXISRNYRGDVDLGVIXKXXXXXXXXXXXXXXXXXXQXSECTXVYIKXNX 335
G+++ + G+V ISR YR D+ + + + +IK
Sbjct: 4 GLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVT-NIARTSFFHIKRAN 62
Query: 336 XYIVSRTKKNAXIXXVXVFLYRIVEVXXEXFKKLEEE 446
++ + TK+N V FL +I+EV F K+ EE
Sbjct: 63 IWLAAVTKQNVNAAMVFEFLLKIIEVMQSYFGKISEE 99
>AE014297-2547|AAF55570.1| 1194|Drosophila melanogaster CG14304-PA
protein.
Length = 1194
Score = 30.3 bits (65), Expect = 5.6
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 276 FPLLPFPSVKXXICXSHPDQHHH 208
FP LP PS K + HP QHHH
Sbjct: 213 FPPLP-PSPKEQVQQQHPQQHHH 234
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,378,493
Number of Sequences: 53049
Number of extensions: 265053
Number of successful extensions: 367
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6499020495
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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