Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_B04
(1159 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 89 2e-16
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 81 4e-14
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 64 9e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 51 7e-05
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 38 0.49
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 37 0.86
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 37 0.86
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 37 1.1
UniRef50_UPI000049A0E6 Cluster: diaphanous protein; n=1; Entamoe... 36 1.5
UniRef50_A1L2E9 Cluster: Putative uncharacterized protein; n=3; ... 35 4.6
UniRef50_Q2RSG3 Cluster: Putative uncharacterized protein precur... 34 8.0
UniRef50_Q6AHS6 Cluster: Protease-1 (PRT1) protein, putative; n=... 34 8.0
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 89.4 bits (212), Expect = 2e-16
Identities = 60/134 (44%), Positives = 69/134 (51%)
Frame = +1
Query: 556 RGEAVCVXGALPLPRSLTRCARSXGCGERYQXXQRR*YGYPQNQGITQERTCEQKASKRP 735
R +C G +PLPRSLTR ARS GCGERY+ G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 736 GTVKRPRCWRFXIGSAPLTSITKIDAQVRGGEXRXDYKDXRRSPWKXPRAXSCSDPAAYR 915
RPR RF IGSAPLTSI K DAQ+ GGE R DYKD RR P P P +
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLP--FG 131
Query: 916 IPVXLXPFGXAWRF 957
+PV +G + F
Sbjct: 132 LPVSFRCYGRGFSF 145
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 81.4 bits (192), Expect = 4e-14
Identities = 47/83 (56%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Frame = +1
Query: 724 SKRPGTVKRPRCWRFXIGSAPLTSITKIDAQVRGGEXRXDYKDXRRSPWKXPRAXSCSDP 903
SK+ T R RF IGSAPLTSITKIDAQVRGGE R DYKD RR P + P P
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 904 AAYRIPVXLXPFG--XAWRFLIA 966
R+P PF AWRFLIA
Sbjct: 62 C--RLPDTCPPFSLREAWRFLIA 82
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 63.7 bits (148), Expect = 9e-09
Identities = 31/46 (67%), Positives = 33/46 (71%)
Frame = +1
Query: 742 VKRPRCWRFXIGSAPLTSITKIDAQVRGGEXRXDYKDXRRSPWKXP 879
V+ PR RF IGSAPLTSITK DAQ+ GGE R DYKD RR P P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAP 89
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/57 (54%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 532 CINESANARGEAVCVXGALPLPRSLTRCARSXGCGERYQXXQ-RR*YGYPQNQGITQ 699
CI + A AR EAV V ALPL RS TRC RS GCG R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p07168;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_pCKO2p07168 - Citrobacter koseri ATCC BAA-895
Length = 99
Score = 50.8 bits (116), Expect = 7e-05
Identities = 29/70 (41%), Positives = 34/70 (48%)
Frame = -1
Query: 1036 GXXAXSPGWXRXGPTPDXDTXRGGL*ESATLXRRXXGXXVSGKRQGRNRXAHEGASRGNA 857
G A SP W P P DT ++ + VSGKRQGRNR AHEGA+ +
Sbjct: 27 GVRAYSPAWSER-PKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGAAGEKS 85
Query: 856 WXLYSPVGXR 827
SPVG R
Sbjct: 86 PASLSPVGFR 95
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 37.9 bits (84), Expect = 0.49
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +2
Query: 335 DPDMIRYXDEXGQXTTRMQ 391
DPDMIRY DE GQ TTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 37.1 bits (82), Expect = 0.86
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = +1
Query: 631 CGERYQXXQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFXIGSAPLTSITK 804
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 805 IDAQVRGGEXRXDYKDXRRSPWKXP 879
I Q + + + +YK P + P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSP 106
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 37.1 bits (82), Expect = 0.86
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -3
Query: 602 ERGSGRAPXTQTASPRALADSLMQ 531
+R + AP TQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 36.7 bits (81), Expect = 1.1
Identities = 22/44 (50%), Positives = 23/44 (52%)
Frame = +1
Query: 817 VRGGEXRXDYKDXRRSPWKXPRAXSCSDPAAYRIPVXLXPFGXA 948
VR GE R D K S P A SCS+PA RIPV PF A
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPV--PPFSLA 64
>UniRef50_UPI000049A0E6 Cluster: diaphanous protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: diaphanous protein - Entamoeba
histolytica HM-1:IMSS
Length = 1176
Score = 36.3 bits (80), Expect = 1.5
Identities = 23/84 (27%), Positives = 26/84 (30%)
Frame = +2
Query: 842 TIKXPGVPPGSXXXXXXXXXXXXXGYXSAXXPSGKRGAFS*PPPVGIXVGXRAVPPPTXA 1021
T+ P PPG+ G P G G PPP G+ PPP
Sbjct: 603 TMPPPPPPPGASSIPPPPPPPGMPGMPPPPPPPGMPGMPPPPPPPGMPGMPPPPPPPGMP 662
Query: 1022 VCXXPPXPXXPXAPXXXXXRPXXP 1093
PP P P P P P
Sbjct: 663 GMPPPPPPGMPGMPPPPPGMPGMP 686
>UniRef50_A1L2E9 Cluster: Putative uncharacterized protein; n=3; Danio
rerio|Rep: Putative uncharacterized protein - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 428
Score = 34.7 bits (76), Expect = 4.6
Identities = 18/62 (29%), Positives = 21/62 (33%)
Frame = +2
Query: 965 PPPVGIXVGXRAVPPPTXAVCXXPPXPXXPXAPXXXXXRPXXPXRXXXXIFPPGAXXPXX 1144
PPP + V PPP +C PP P P P P + PP P
Sbjct: 354 PPPGNMGVPPPPPPPPPGNMCIPPPPPPPPGYTGSSLPPPAPPPPQNASMAPPPPPPPPL 413
Query: 1145 XG 1150
G
Sbjct: 414 GG 415
>UniRef50_Q2RSG3 Cluster: Putative uncharacterized protein precursor;
n=1; Rhodospirillum rubrum ATCC 11170|Rep: Putative
uncharacterized protein precursor - Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255)
Length = 245
Score = 33.9 bits (74), Expect = 8.0
Identities = 21/64 (32%), Positives = 22/64 (34%)
Frame = -1
Query: 1156 GXSXXPXGXXPGGENXXXXPGXXXRXXXXXXXGXRXGWXXGXXAXSPGWXRXGPTPDXDT 977
G S G PG +N PG R R GW G PGW GP P
Sbjct: 44 GRSGRDNGPPPGWDNSPDGPGWNDRPGGPGWDNDRPGWDNG---PRPGWDN-GPRPGYGD 99
Query: 976 XRGG 965
R G
Sbjct: 100 GRPG 103
>UniRef50_Q6AHS6 Cluster: Protease-1 (PRT1) protein, putative; n=58;
Pneumocystis carinii|Rep: Protease-1 (PRT1) protein,
putative - Pneumocystis carinii
Length = 947
Score = 33.9 bits (74), Expect = 8.0
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +2
Query: 965 PPPVGIXVGXRAVPPPTXAVCXXPPXPXXPXAPXXXXXRPXXPXRXXXXIFPPGAXXP 1138
PPP PPP A PP P P AP P P PP P
Sbjct: 763 PPPPPAPAPAPPAPPPPPAPAPAPPAPPPPPAPAPAPPAPPPPPAPAPAPAPPPPPPP 820
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 793,931,615
Number of Sequences: 1657284
Number of extensions: 12383676
Number of successful extensions: 29812
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 24171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28082
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 115066114169
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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