Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_B04
         (1159 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    30   3.0  
01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,467...    29   7.0  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    29   9.2  
02_04_0264 - 21393029-21393046,21394249-21394814,21395005-21395623     29   9.2  
01_01_0070 - 542603-542686,542803-543441                               29   9.2  

>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
            1211452-1211878,1212091-1213219,1213623-1213746,
            1214207-1214278,1215480-1215578,1215617-1215640,
            1215704-1215745,1215815-1215895,1215983-1216114,
            1216115-1216196,1216271-1216365,1218499-1218570,
            1218676-1218792,1219379-1219447,1219521-1219587,
            1219886-1220025
          Length = 1269

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 18/53 (33%), Positives = 20/53 (37%)
 Frame = +2

Query: 935  PSGKRGAFS*PPPVGIXVGXRAVPPPTXAVCXXPPXPXXPXAPXXXXXRPXXP 1093
            PSG + AFS PPP         +P    A    PP P  P  P      P  P
Sbjct: 554  PSGNKPAFS-PPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPP 605


>01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,
            4675953-4676072,4676185-4676313,4676394-4676442,
            4676899-4676970,4677574-4677707,4677798-4677915,
            4678332-4678541,4678630-4678942,4679539-4679632,
            4679854-4679962,4680243-4680514,4680597-4680724,
            4680832-4681066,4681570-4681758,4681845-4682128,
            4682218-4682398,4682486-4682728,4682904-4682986,
            4683119-4683227,4687996-4688091,4688675-4688764,
            4688881-4689129,4689233-4689412,4690179-4690250,
            4691385-4691474,4691605-4691705,4691794-4691959
          Length = 1757

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 22/81 (27%), Positives = 30/81 (37%)
 Frame = +1

Query: 709  CEQKASKRPGTVKRPRCWRFXIGSAPLTSITKIDAQVRGGEXRXDYKDXRRSPWKXPRAX 888
            C Q  S+    V    CW   + S  L    KI A  + G+ +  Y       WK     
Sbjct: 1564 CVQTLSEHKAAVTSVLCWDEKLLSCSLDKTVKIWAASKSGDLQVIYTHSEEHGWKR---- 1619

Query: 889  SCSDPAAYRIPVXLXPFGXAW 951
              ++PA  R+ V     G AW
Sbjct: 1620 --AEPA--RLAVARKKLGLAW 1636


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +2

Query: 965  PPPVGIXVGXRAVPPPTXAVCXXPPXP 1045
            PPP  I  G    PPP   +   PP P
Sbjct: 1099 PPPPSIGAGAPPPPPPPGGITGVPPPP 1125


>02_04_0264 - 21393029-21393046,21394249-21394814,21395005-21395623
          Length = 400

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 18/61 (29%), Positives = 21/61 (34%)
 Frame = -2

Query: 1137 GXXAPGGKIXXXXRXGXXGRXXXXXGAXGXXGXGGXXXTAXVGGGTALXPTXIPTGGGYE 958
            G  A GG+       G  G      GA G  G GG    A  G G          GGG +
Sbjct: 258  GQAAGGGRGGAGAGGGHGGAGAGAGGARGGAGAGGGHGGAGAGAGGGRGGAGAGAGGGAQ 317

Query: 957  K 955
            +
Sbjct: 318  E 318


>01_01_0070 - 542603-542686,542803-543441
          Length = 240

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 17/58 (29%), Positives = 17/58 (29%), Gaps = 1/58 (1%)
 Frame = +2

Query: 968  PPVGIXVGXRAVPPPTXAVCXXPPXPXXPXAPXXXXXRP-XXPXRXXXXIFPPGAXXP 1138
            PPV   V     PPPT      PP    P  P      P   P        PP    P
Sbjct: 71   PPVAPAVAPVTPPPPTPKKAPPPPVTPPPVTPPPVTPPPVSPPPATPPPALPPSTPPP 128


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,494,800
Number of Sequences: 37544
Number of extensions: 374223
Number of successful extensions: 1130
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3526513192
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)