Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_A18
         (1179 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    44   2e-06
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    41   2e-05
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    38   2e-04
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    32   0.009
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    26   0.56 
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    25   1.3  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   5.2  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    23   5.2  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   6.9  

>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 44.4 bits (100), Expect = 2e-06
 Identities = 21/64 (32%), Positives = 28/64 (43%)
 Frame = +3

Query: 723 KLFSCDKCNYVTHLRARFTKHVKYHSMPMIKCIVCDFRTPYKWNLDRHMKNHGGIGSFKC 902
           K FSC  C  V         H++ H++P  KC +C       W L  H++ H G   F C
Sbjct: 15  KSFSCKYCEKVYVSLGALKMHIRTHTLPC-KCHLCGKAFSRPWLLQGHIRTHTGEKPFSC 73

Query: 903 SMCN 914
             CN
Sbjct: 74  QHCN 77


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 41.1 bits (92), Expect = 2e-05
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = +3

Query: 720 DKLFSCDKCNYVTHLRARFTKHVKYHSMPM-IKCIVCDFRTPYKWNLDRHMKNHGGIGSF 896
           +K + C+ C+    ++   + H + H+     KC VC+    +   L RHM+ H G    
Sbjct: 117 EKPYQCEYCSKSFSVKENLSVHRRIHTKERPYKCDVCERAFEHSGKLHRHMRIHTGERPH 176

Query: 897 KCSMCNFT 920
           KC++C+ T
Sbjct: 177 KCTVCSKT 184



 Score = 35.9 bits (79), Expect = 7e-04
 Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
 Frame = +3

Query: 699 DTPLKG-KDKLFSCDKCNYVTHLRARFTKHVKYHSMP---MIKCIVCDFRTPYKWNLDRH 866
           +TPL   ++K + C  C      +  +  H++ H        +C +C         L RH
Sbjct: 51  ETPLTNIEEKTYQCLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRH 110

Query: 867 MKNHGGIGSFKCSMCNFTADIKQS*LYMK*ITTRXR 974
            + H G   ++C  C+ +  +K++    + I T+ R
Sbjct: 111 YRTHTGEKPYQCEYCSKSFSVKENLSVHRRIHTKER 146



 Score = 34.7 bits (76), Expect = 0.002
 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
 Frame = +3

Query: 717 KDKLFSCDKCNYVTHLRARFTKHVKYHSMPMI-KCIVCDFRTPYKWNLDRHMKNHGGIGS 893
           K++ + CD C        +  +H++ H+     KC VC         L  HM+ H G   
Sbjct: 144 KERPYKCDVCERAFEHSGKLHRHMRIHTGERPHKCTVCSKTFIQSGQLVIHMRTHTGEKP 203

Query: 894 FKCSMC 911
           + C  C
Sbjct: 204 YVCKAC 209



 Score = 28.3 bits (60), Expect = 0.14
 Identities = 17/74 (22%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
 Frame = +3

Query: 720 DKLFSCDKCNYVTHLRARFTKHVKYHSMPM-IKCIVCDFRTPYKWNLDRHMKNHGGIGSF 896
           +K + C  C        +   H + H+      C +C     Y   L  H   H G   +
Sbjct: 201 EKPYVCKACGKGFTCSKQLKVHTRTHTGEKPYTCDICGKSFGYNHVLKLHQVAHYGEKVY 260

Query: 897 KCSMCNFTADIKQS 938
           KC++C+ T   K++
Sbjct: 261 KCTLCHETFGSKKT 274



 Score = 27.5 bits (58), Expect = 0.24
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +3

Query: 315 YNCTKCTFYTQNPRAYLVHTRDTHFVKLKIYECPHCIYASRHNQKLVRHVKM 470
           Y C  C+          VH R  H  K + Y+C  C  A  H+ KL RH+++
Sbjct: 120 YQCEYCSKSFSVKENLSVHRR-IH-TKERPYKCDVCERAFEHSGKLHRHMRI 169



 Score = 24.6 bits (51), Expect = 1.7
 Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
 Frame = +3

Query: 720 DKLFSCDKCNYVTHLRARFTKH-VKYHSMPMIKCIVCDFRTPYKWNLDRHMKNH 878
           +K ++CD C            H V ++   + KC +C      K  ++ H+K H
Sbjct: 229 EKPYTCDICGKSFGYNHVLKLHQVAHYGEKVYKCTLCHETFGSKKTMELHIKTH 282


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 37.5 bits (83), Expect = 2e-04
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +3

Query: 723 KLFSCDKCNYVTHLRARFTKHVKYHS-MPMIKCIVCDFRTPYKWNLDRHMKNH 878
           K F C+KC+Y    ++    H+K HS +   +C  C + T Y  +L  H++ +
Sbjct: 15  KPFKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANCTYATKYCHSLKLHLRKY 67



 Score = 33.1 bits (72), Expect = 0.005
 Identities = 15/53 (28%), Positives = 25/53 (47%)
 Frame = +3

Query: 759 HLRARFTKHVKYHSMPMIKCIVCDFRTPYKWNLDRHMKNHGGIGSFKCSMCNF 917
           HL      H  + S P  KC  C +    K  L+ H+K+H  +  ++C+ C +
Sbjct: 3   HLEYHLRNH--FGSKPF-KCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANCTY 52



 Score = 30.3 bits (65), Expect = 0.034
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 846 KWNLDRHMKNHGGIGSFKCSMCNFT 920
           K +L+ H++NH G   FKC  C+++
Sbjct: 1   KHHLEYHLRNHFGSKPFKCEKCSYS 25



 Score = 27.9 bits (59), Expect = 0.18
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = +3

Query: 315 YNCTKCTFYTQNPRAYLVHTRDTHFVKLKIYECPHCIYASRHNQKLVRHVK 467
           + C KC++   N      H +    V    Y C +C YA+++   L  H++
Sbjct: 17  FKCEKCSYSCVNKSMLNSHLKSHSNVYQ--YRCANCTYATKYCHSLKLHLR 65


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 32.3 bits (70), Expect = 0.009
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = +3

Query: 720 DKLFSCDKCNYVTHLRARFTKHVKYHSMPM-IKCIVCDFRTPYKWNLDRHMKNHGGIGSF 896
           +K F C +C+           H++ H+      C  CD +     NL RH++ H G   +
Sbjct: 7   EKPFECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGERPY 66

Query: 897 KCSMC 911
            C +C
Sbjct: 67  ACELC 71



 Score = 24.6 bits (51), Expect = 1.7
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 813 KCIVCDFRTPYKWNLDRHMKNHGGIGSFKCSMCN 914
           +C  C  R     +L  HM+ H G   + CS C+
Sbjct: 11  ECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCD 44


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 26.2 bits (55), Expect = 0.56
 Identities = 19/67 (28%), Positives = 27/67 (40%)
 Frame = +3

Query: 276 EDFELPHCKIRRNYNCTKCTFYTQNPRAYLVHTRDTHFVKLKIYECPHCIYASRHNQKLV 455
           E  E P+C  RRN++C    +Y+        H +D H     +Y C  C    R    L 
Sbjct: 4   EPQECPYC--RRNFSC----YYSLKR-----HFQDKHEQSDTLYVCEFCNRRYRTKNSLT 52

Query: 456 RHVKMVH 476
            H  + H
Sbjct: 53  THKSLQH 59


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = +3

Query: 723 KLFSCDKCNYVTHLRARFTKHV--KY-HSMPMIKCIVCD 830
           KLF+C  C  V   +A   +HV  K+       +C++C+
Sbjct: 4   KLFTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICE 42



 Score = 24.6 bits (51), Expect = 1.7
 Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
 Frame = +3

Query: 306 RRNYNCTKCTFYTQNPRAYLVHTRDTHFVKLKIYECPHC--IYASRHNQKLVRHVKMVH 476
           ++ + C  C     +  +   H  D H  + + Y C  C  +Y SR++  L+ H+   H
Sbjct: 3   KKLFTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNS--LMTHIYTYH 59


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 6/23 (26%), Positives = 17/23 (73%)
 Frame = -2

Query: 482 VIMDHLNVSYEFLIVPRGIDAVG 414
           ++ + L++ +EF++ P+G  ++G
Sbjct: 490 IVEEELDLQFEFILAPKGPVSLG 512


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
 Frame = +3

Query: 729 FSCDKCNYVTHLRARFTKHVK-YHSMPMIK--CIVC 827
           F C+ CN +     R  +H++  H+ P  +  C +C
Sbjct: 3   FRCEPCNKILTSLTRLRRHIQNVHTRPSKEPICNIC 38


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -2

Query: 371 VYQISAWILSVERALCTVVVSSYLTVGQFKIFG 273
           V +I  W L     +CT + SS  +VG+    G
Sbjct: 181 VVKIPRWDLGKFHRVCTQIGSSMKSVGEVMAIG 213


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 263,095
Number of Sequences: 438
Number of extensions: 5091
Number of successful extensions: 28
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 40126833
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)