Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_A17
         (1188 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81029-7|CAB02698.2|  366|Caenorhabditis elegans Hypothetical pr...    99   5e-21
AC024827-3|AAF60807.2|  317|Caenorhabditis elegans Hypothetical ...    39   0.008
AF098504-5|AAC67410.3|  322|Caenorhabditis elegans Serpentine re...    30   2.8  
Z71181-7|CAA94900.2|  485|Caenorhabditis elegans Hypothetical pr...    29   6.4  
AF101316-1|AAC69231.1|  684|Caenorhabditis elegans Hypothetical ...    29   6.4  
AC006664-2|AAF39903.1|  346|Caenorhabditis elegans Hypothetical ...    29   6.4  

>Z81029-7|CAB02698.2|  366|Caenorhabditis elegans Hypothetical
           protein C01A2.3 protein.
          Length = 366

 Score = 99.1 bits (236), Expect = 5e-21
 Identities = 52/187 (27%), Positives = 92/187 (49%), Gaps = 1/187 (0%)
 Frame = +3

Query: 396 AVQSFAANGEPTFASIGLGGWG-PVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVRVVMFP 572
           +V    A+G      +GL  W  P    +   E +HV LD+PWW  IV  T+ +R ++  
Sbjct: 64  SVDELIASGASVLEELGLWTWWKPSSYFRWALESIHVHLDIPWWVTIVAATVTLRALLIG 123

Query: 573 LVILSQRNSAQMNNNLPEIQLLQMKMTQARQTGNQIEAARYAQEMMLFMKEKGLNPLKNL 752
           + ++SQ+  A+ +    E+   + ++ +AR+  NQ+   +   E   F++ K +   +  
Sbjct: 124 VPVMSQKLVAKQSMYRKEMNEFRDRIDEARKENNQLLQQQILLEQRDFLRSKDIRLGRQF 183

Query: 753 IVPLAQTPLFISFFMGLRGMANCPVESMTHGGLWWFVDLTVPDQYFLLPVITSATMWATI 932
           +V  A   +F + F  ++ M       ++ GG  WF DLT  D Y+ LP I++ATM    
Sbjct: 184 MVMAANGAVFATQFFAIKKMVVVNYPGLSTGGTLWFTDLTATDPYYALPFISAATMALVT 243

Query: 933 XLGVXGG 953
            +G+  G
Sbjct: 244 KVGIEMG 250


>AC024827-3|AAF60807.2|  317|Caenorhabditis elegans Hypothetical
           protein Y55F3AR.1 protein.
          Length = 317

 Score = 38.7 bits (86), Expect = 0.008
 Identities = 21/68 (30%), Positives = 31/68 (45%)
 Frame = +3

Query: 699 QEMMLFMKEKGLNPLKNLIVPLAQTPLFISFFMGLRGMANCPVESMTHGGLWWFVDLTVP 878
           QE+   + E GL   +   + +   P++I     LR + N        G LW   D+  P
Sbjct: 150 QEVPAMLAEHGLQAARIQNLKMCTVPVWIFSSFALRNVINSDFHPSVAGHLW-IPDMLAP 208

Query: 879 DQYFLLPV 902
           D YF+LPV
Sbjct: 209 DPYFILPV 216


>AF098504-5|AAC67410.3|  322|Caenorhabditis elegans Serpentine
           receptor, class t protein62 protein.
          Length = 322

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 14/52 (26%), Positives = 32/52 (61%)
 Frame = +3

Query: 777 LFISFFMGLRGMANCPVESMTHGGLWWFVDLTVPDQYFLLPVITSATMWATI 932
           +F+SF   ++ +++  +E++  GG  W + + +   +++L V+  A+ WATI
Sbjct: 110 IFLSFNRFIQ-LSSPTLENLFFGGRRWMIWIGIATSFWVLFVLALASPWATI 160


>Z71181-7|CAA94900.2|  485|Caenorhabditis elegans Hypothetical
           protein K07C5.7 protein.
          Length = 485

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 578 HKWEHNNSDNYCAQDNCTPPWNI*SDVQIFET 483
           H ++ NN D Y   D+ TP W I S  + F T
Sbjct: 235 HPFDANNVDKYVVGDDYTPIWEINSLKKYFNT 266


>AF101316-1|AAC69231.1|  684|Caenorhabditis elegans Hypothetical
           protein F52F10.3 protein.
          Length = 684

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +3

Query: 501 VTLDVPWWGAIVLGTIVVRVVMFPLVILSQRNSAQMNNNLPE 626
           V  DVP+WG  V  TIV+ V +F  ++   +++    +NL E
Sbjct: 166 VEKDVPFWGFTVFLTIVIAVAIFATLLDYVQDAVLGLSNLKE 207


>AC006664-2|AAF39903.1|  346|Caenorhabditis elegans Hypothetical
           protein H24O09.2 protein.
          Length = 346

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 21/54 (38%), Positives = 27/54 (50%)
 Frame = -2

Query: 560 NSDNYCAQDNCTPPWNI*SDVQIFETVLHQSNWSPTS*AYAGKRRFTIRSKRLD 399
           + DNYC Q+ C     +  DVQ F + L   N   +S      R F+ RSKRLD
Sbjct: 140 SKDNYCTQEFCDEFKEL--DVQTFVSPLQMDN---SSFYQKIIRMFSSRSKRLD 188


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,105,800
Number of Sequences: 27780
Number of extensions: 429466
Number of successful extensions: 1090
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3255550896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)