Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_A15
(1174 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 404 e-112
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 404 e-112
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 404 e-112
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 404 e-112
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 402 e-111
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 402 e-111
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 400 e-111
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 192 3e-48
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 179 2e-44
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 167 9e-41
AB061848-1|BAB79486.1| 62|Homo sapiens ribosomal protein L5 pr... 51 7e-06
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 404 bits (995), Expect = e-112
Identities = 186/279 (66%), Positives = 223/279 (79%)
Frame = +2
Query: 95 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 274
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 275 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 454
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 455 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 634
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 635 PGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIY 814
PGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED++K+QFS+YIK VT D +E +Y
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRCLMEEDEDAYKKQFSQYIKNSVTPDMMEEMY 240
Query: 815 KKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERK 931
KKAH AIR +P ++KK K VK+KRWN+ K++LA++K
Sbjct: 241 KKAHAAIRENPVYEKK--PKKEVKKKRWNRPKMSLAQKK 277
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 404 bits (994), Expect = e-112
Identities = 186/279 (66%), Positives = 223/279 (79%)
Frame = +2
Query: 95 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 274
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 275 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 454
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 455 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 634
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 635 PGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIY 814
PGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED++K+QFS+YIK VT D +E +Y
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMY 240
Query: 815 KKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERK 931
KKAH AIR +P ++KK K VK+KRWN+ K++LA++K
Sbjct: 241 KKAHAAIRENPVYEKK--PKKEVKKKRWNRPKMSLAQKK 277
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 404 bits (994), Expect = e-112
Identities = 186/279 (66%), Positives = 223/279 (79%)
Frame = +2
Query: 95 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 274
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 275 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 454
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 455 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 634
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 635 PGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIY 814
PGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED++K+QFS+YIK VT D +E +Y
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMY 240
Query: 815 KKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERK 931
KKAH AIR +P ++KK K VK+KRWN+ K++LA++K
Sbjct: 241 KKAHAAIRENPVYEKK--PKKEVKKKRWNRPKMSLAQKK 277
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 404 bits (994), Expect = e-112
Identities = 186/279 (66%), Positives = 223/279 (79%)
Frame = +2
Query: 95 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 274
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 275 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 454
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 455 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 634
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 635 PGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIY 814
PGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED++K+QFS+YIK VT D +E +Y
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMY 240
Query: 815 KKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERK 931
KKAH AIR +P ++KK K VK+KRWN+ K++LA++K
Sbjct: 241 KKAHAAIRENPVYEKK--PKKEVKKKRWNRPKMSLAQKK 277
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 402 bits (990), Expect = e-111
Identities = 185/279 (66%), Positives = 223/279 (79%)
Frame = +2
Query: 95 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 274
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 275 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 454
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 455 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 634
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 635 PGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIY 814
PGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED++K+QFS+YIK VT D +E +Y
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMY 240
Query: 815 KKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERK 931
KKAH AIR +P ++KK K VK++RWN+ K++LA++K
Sbjct: 241 KKAHAAIRENPVYEKK--PKKEVKKERWNRPKMSLAQKK 277
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 402 bits (989), Expect = e-111
Identities = 185/279 (66%), Positives = 222/279 (79%)
Frame = +2
Query: 95 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 274
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 275 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 454
CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 455 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 634
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 635 PGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIY 814
PGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED++K+QFS+YIK VT D +E +Y
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMY 240
Query: 815 KKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERK 931
KKAH AIR +P ++KK K VK+KRWN+ K++LA++K
Sbjct: 241 KKAHAAIRENPVYEKK--PKKEVKKKRWNRPKMSLAQKK 277
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 400 bits (984), Expect = e-111
Identities = 186/279 (66%), Positives = 223/279 (79%)
Frame = +2
Query: 95 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 274
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 67
Query: 275 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 454
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 68 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 127
Query: 455 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 634
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 128 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 187
Query: 635 PGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIY 814
PGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED++K+QFS+YIK VT D +E +Y
Sbjct: 188 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPD-MEEMY 246
Query: 815 KKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERK 931
KKAH AIR +P ++KK K VK+KRWN+ K++LA++K
Sbjct: 247 KKAHAAIRENPVYEKK--PKKEVKKKRWNRPKMSLAQKK 283
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 192 bits (467), Expect = 3e-48
Identities = 84/98 (85%), Positives = 95/98 (96%)
Frame = +2
Query: 95 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 274
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 275 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 388
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAA
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 179 bits (436), Expect = 2e-44
Identities = 81/127 (63%), Positives = 106/127 (83%)
Frame = +2
Query: 551 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLE 730
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLM 60
Query: 731 QDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRK 910
++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K VK+KRWN+ K
Sbjct: 61 EEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKK--PKKEVKKKRWNRPK 118
Query: 911 LTLAERK 931
++LA++K
Sbjct: 119 MSLAQKK 125
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 167 bits (405), Expect = 9e-41
Identities = 76/125 (60%), Positives = 90/125 (72%)
Frame = +2
Query: 245 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 424
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 425 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 604
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 605 LNVPH 619
L++PH
Sbjct: 121 LSIPH 125
>AB061848-1|BAB79486.1| 62|Homo sapiens ribosomal protein L5
protein.
Length = 62
Score = 51.2 bits (117), Expect = 7e-06
Identities = 23/44 (52%), Positives = 34/44 (77%)
Frame = +2
Query: 800 IEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERK 931
+E +YKKAH AIR +P ++KK K VK+KRWN+ K++LA++K
Sbjct: 1 MEEMYKKAHAAIRENPVYEKK--PKKEVKKKRWNRPKMSLAQKK 42
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,195,556
Number of Sequences: 237096
Number of extensions: 2957840
Number of successful extensions: 6953
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6698
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16403776540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -