Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_A15
         (1174 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical pr...   336   2e-92
U53332-1|AAK31529.2|  580|Caenorhabditis elegans Hypothetical pr...    31   1.2  
DQ178637-1|ABD75716.1|  580|Caenorhabditis elegans F59G1.4 protein.    31   1.2  
AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical ...    31   1.2  
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    30   3.6  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    30   3.6  
Z81109-17|CAB03241.2|  497|Caenorhabditis elegans Hypothetical p...    29   6.3  

>Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical
           protein F54C9.5 protein.
          Length = 293

 Score =  336 bits (825), Expect = 2e-92
 Identities = 163/279 (58%), Positives = 197/279 (70%)
 Frame = +2

Query: 95  MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 274
           MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1   MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60

Query: 275 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 454
             Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY+TG                  
Sbjct: 61  VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYK 120

Query: 455 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 634
                   +YNVE  +     F+  LD+GLARTTTG+++F  MKG  DGG+NVPHS  RF
Sbjct: 121 GHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRF 179

Query: 635 PGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIY 814
            G+D ESK++NAE HR  I G HVA+YM  L+++DED +KRQFSK++  G+ AD + A Y
Sbjct: 180 FGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQFSKFLAAGLNADNLVATY 239

Query: 815 KKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERK 931
           +K H AIRAD S   K+  K S   KR   ++LT  ERK
Sbjct: 240 QKVHSAIRADASPAAKKAAKPS---KRHTAKRLTYDERK 275


>U53332-1|AAK31529.2|  580|Caenorhabditis elegans Hypothetical
           protein F59G1.4 protein.
          Length = 580

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = +2

Query: 773 IKLGVTADAIEAIYKKAHEAI---RADPSHKKKELKKDSVKQKRWNKRKLTLAERKTES 940
           I +G++  A+E  YKKA + I   + D  +KKK+ K+   K+K    R + L  RK  S
Sbjct: 422 INIGLSDGAVE--YKKAQDEITRKKEDEENKKKKEKEKVEKEKMKALRHIQLTSRKAPS 478


>DQ178637-1|ABD75716.1|  580|Caenorhabditis elegans F59G1.4 protein.
          Length = 580

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = +2

Query: 773 IKLGVTADAIEAIYKKAHEAI---RADPSHKKKELKKDSVKQKRWNKRKLTLAERKTES 940
           I +G++  A+E  YKKA + I   + D  +KKK+ K+   K+K    R + L  RK  S
Sbjct: 422 INIGLSDGAVE--YKKAQDEITRKKEDEENKKKKEKEKVEKEKMKALRHIQLTSRKAPS 478


>AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical
           protein F41A4.1 protein.
          Length = 696

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +2

Query: 485 NVEPVDNGPGAFRCYL-DVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKK 661
           N EP++   G F C+L       TT+G+R  G      +  L    + ++FPG    +  
Sbjct: 68  NAEPIEKKNGGFNCHLHSKSPVLTTSGSRTVGTKTCLENKCLKRSFAFEKFPGRSLVNSS 127

Query: 662 F 664
           F
Sbjct: 128 F 128


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 329  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 216
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 329  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 216
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z81109-17|CAB03241.2|  497|Caenorhabditis elegans Hypothetical
           protein R10D12.10 protein.
          Length = 497

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +2

Query: 797 AIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKTE 937
           A E + KK  E  R     K+KE +KD  K+K   K K    E++ E
Sbjct: 354 AEEKVVKKNKEKEREKEKDKEKEKEKDKEKEKEKEKEKEKDKEKERE 400


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,370,040
Number of Sequences: 27780
Number of extensions: 469620
Number of successful extensions: 1388
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1368
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3203378606
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)