Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_A14
(1228 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 33 0.35
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 1.4
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 1.7
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 31 2.4
12_02_1174 - 26696869-26698191 30 3.2
12_02_0299 - 17051570-17052474,17053542-17053755 30 3.2
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 30 4.3
08_02_1143 + 24659105-24659386,24660171-24660272,24661259-246615... 25 4.7
01_06_0969 - 33472588-33474480,33475543-33475623,33475692-334757... 24 4.8
05_04_0206 + 19034259-19035462,19036870-19037045,19037752-190379... 24 4.8
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 25 4.8
07_03_0177 - 14770777-14772045 29 7.5
01_06_0317 + 28425408-28426079,28426286-28426351 24 9.0
>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 33.5 bits (73), Expect = 0.35
Identities = 21/78 (26%), Positives = 21/78 (26%), Gaps = 1/78 (1%)
Frame = -3
Query: 1124 PPPXXXXXXPXXPXXXXFSXXPPXXXNXXP-PXXXXPXPPPXXXXXXXXXXXXXXPKXXP 948
PPP P P S PP P P P PPP P P
Sbjct: 564 PPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPP 623
Query: 947 XXPXXGXXXXXKNLPPPP 894
P PPPP
Sbjct: 624 PPPLPNHSVLPPPPPPPP 641
>08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.5 bits (68), Expect = 1.4
Identities = 20/80 (25%), Positives = 20/80 (25%)
Frame = -3
Query: 1124 PPPXXXXXXPXXPXXXXFSXXPPXXXNXXPPXXXXPXPPPXXXXXXXXXXXXXXPKXXPX 945
PPP P F PP PP PPP P P
Sbjct: 55 PPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPP 114
Query: 944 XPXXGXXXXXKNLPPPPXXP 885
P PPPP P
Sbjct: 115 SPPPSAPPPP---PPPPTQP 131
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 29.5 bits (63), Expect = 5.7
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -2
Query: 963 PXXQXPXPXXXRXXXXXKPPPPPPXP 886
P P P + KPPPPPP P
Sbjct: 355 PPPPPPPPPPPKLNTAPKPPPPPPPP 380
Score = 25.4 bits (53), Expect(2) = 1.7
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -2
Query: 948 PXPXXXRXXXXXKPPPPPPXP 886
P P + PPPPPP P
Sbjct: 338 PSPRPVQPSNAPPPPPPPPPP 358
Score = 24.2 bits (50), Expect(2) = 1.7
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 909 PPPPPPXPXXXK 874
PPPPPP P K
Sbjct: 355 PPPPPPPPPPPK 366
>07_03_0792 - 21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 30.7 bits (66), Expect = 2.4
Identities = 21/80 (26%), Positives = 23/80 (28%)
Frame = -3
Query: 1124 PPPXXXXXXPXXPXXXXFSXXPPXXXNXXPPXXXXPXPPPXXXXXXXXXXXXXXPKXXPX 945
PPP P P + PP + PP P PPP P
Sbjct: 560 PPPIPKLLSPPAPQ----APMPPLKASPVPPPE--PSPPPAPKAAPPPPPPKSTGPGPPR 613
Query: 944 XPXXGXXXXXKNLPPPPXXP 885
P K PPPP P
Sbjct: 614 PPPPAMPGSSKTRPPPPLKP 633
>12_02_1174 - 26696869-26698191
Length = 440
Score = 30.3 bits (65), Expect = 3.2
Identities = 17/59 (28%), Positives = 18/59 (30%), Gaps = 1/59 (1%)
Frame = -2
Query: 1059 PXXXKPXPPXXXXTXPPXXXXXXXXXXXXRXXPXXQXP-XPXXXRXXXXXKPPPPPPXP 886
P P PP T PP + P P P KP PPPP P
Sbjct: 214 PTLPPPSPPPPPPTVPPRTPGDTPAVVEPKPQPPPPPPRAPVKMPRVLEPKPSPPPPSP 272
Score = 28.7 bits (61), Expect = 9.9
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 1/63 (1%)
Frame = -2
Query: 1059 PXXXKPXPPXXXXTXPPXXXXXXXXXXXXRXXPXXQXPXPXXXRXXXXXKPPPPPP-XPX 883
P KP PP PP P Q P P PPPPPP P
Sbjct: 141 PPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQ-PKPQPPPSLQPPSPPPPPPTRPP 199
Query: 882 XXK 874
K
Sbjct: 200 SVK 202
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 30.3 bits (65), Expect = 3.2
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = -3
Query: 1124 PPPXXXXXXPXXPXXXXFSXXPPXXXNXXPPXXXXPXPPP 1005
PPP P P F P + PP P PPP
Sbjct: 293 PPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPP 332
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.9 bits (64), Expect = 4.3
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = -2
Query: 1044 PXPPXXXXTXPPXXXXXXXXXXXXRXXPXXQXPXPXXXRXXXXXKPPPPPPXP 886
P PP PP P P P PPPPPP P
Sbjct: 1137 PPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLP 1189
>08_02_1143 +
24659105-24659386,24660171-24660272,24661259-24661521,
24661775-24661874,24662080-24662238,24662327-24663147,
24663299-24663618,24665831-24667398
Length = 1204
Score = 24.6 bits (51), Expect(2) = 4.7
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = -2
Query: 948 PXPXXXRXXXXXKPPPPPP 892
P P R PPPPPP
Sbjct: 710 PSPPHLRIPRPWPPPPPPP 728
Score = 23.4 bits (48), Expect(2) = 4.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 909 PPPPPPXP 886
PPPPPP P
Sbjct: 722 PPPPPPPP 729
>01_06_0969 -
33472588-33474480,33475543-33475623,33475692-33475740,
33475866-33476281,33477208-33477447
Length = 892
Score = 24.2 bits (50), Expect(2) = 4.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 909 PPPPPPXPXXXK 874
PPPPPP P K
Sbjct: 276 PPPPPPTPPAHK 287
Score = 23.8 bits (49), Expect(2) = 4.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2
Query: 912 KPPPPPPXP 886
+PPPPPP P
Sbjct: 273 QPPPPPPPP 281
>05_04_0206 +
19034259-19035462,19036870-19037045,19037752-19037975,
19038133-19038914,19039337-19039494
Length = 847
Score = 24.2 bits (50), Expect(2) = 4.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 909 PPPPPPXPXXXK 874
PPPPPP P K
Sbjct: 219 PPPPPPPPPDSK 230
Score = 23.8 bits (49), Expect(2) = 4.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2
Query: 912 KPPPPPPXP 886
+PPPPPP P
Sbjct: 217 QPPPPPPPP 225
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 24.6 bits (51), Expect(2) = 4.8
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = -2
Query: 948 PXPXXXRXXXXXKPPPPPP 892
P P R PPPPPP
Sbjct: 257 PPPQSVRPPPPPPPPPPPP 275
Score = 23.4 bits (48), Expect(2) = 4.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 909 PPPPPPXP 886
PPPPPP P
Sbjct: 269 PPPPPPPP 276
>07_03_0177 - 14770777-14772045
Length = 422
Score = 29.1 bits (62), Expect = 7.5
Identities = 25/86 (29%), Positives = 25/86 (29%), Gaps = 1/86 (1%)
Frame = +1
Query: 874 FXXXGXXGGGGRFXXXXXXPXXGXXGLXXGXXXXXXXXXXXXXXGGGXGXXXXGGXXFXX 1053
F G GGGG F G GL G GGG G G F
Sbjct: 67 FGGGGGGGGGGGFGGGGGFGGGGGGGLGGGGGGGLGGGGGFGK-GGGVGGGFGKGGGFGK 125
Query: 1054 XGGXXEK-XXXXGXXGXXXKXXGGGF 1128
GG G G GGGF
Sbjct: 126 GGGFGGGFGKGGGIGGGIGHGAGGGF 151
>01_06_0317 + 28425408-28426079,28426286-28426351
Length = 245
Score = 23.8 bits (49), Expect(2) = 9.0
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = -2
Query: 963 PXXQXPXPXXXRXXXXXKPPPPPP 892
P + P P PPPPPP
Sbjct: 110 PQPRSPEPETPPAPAPLPPPPPPP 133
Score = 23.4 bits (48), Expect(2) = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 909 PPPPPPXP 886
PPPPPP P
Sbjct: 127 PPPPPPPP 134
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,862,986
Number of Sequences: 37544
Number of extensions: 411591
Number of successful extensions: 7060
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5603
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3771247248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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