Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_A13
(1283 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 32 0.85
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 30 3.4
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 4.5
07_03_1636 + 28290642-28291574 30 4.5
07_01_0080 + 587674-588510 30 4.5
03_01_0515 - 3864796-3865425 30 4.5
12_02_0299 - 17051570-17052474,17053542-17053755 29 6.0
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 29 6.0
09_02_0603 - 11150739-11150746,11150791-11151340 29 6.0
05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747 29 6.0
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 29 7.9
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 29 7.9
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 29 7.9
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344... 29 7.9
02_05_0686 - 30900748-30902167,30903442-30904742 29 7.9
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 32.3 bits (70), Expect = 0.85
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 497 PPPPXXXFFXXXPPXXPPXPPP 432
PPPP + PP PP PPP
Sbjct: 114 PPPPHLLHYYGHPPPPPPPPPP 135
>01_06_1670 -
39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 30.3 bits (65), Expect = 3.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 497 PPPPXXXFFXXXPPXXPPXPPP 432
PPPP PP PP PPP
Sbjct: 412 PPPPPTHTHGPPPPPPPPPPPP 433
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.9 bits (64), Expect = 4.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 497 PPPPXXXFFXXXPPXXPPXPPP 432
PPPP PP PP PPP
Sbjct: 622 PPPPPLPNHSVLPPPPPPPPPP 643
>07_03_1636 + 28290642-28291574
Length = 310
Score = 29.9 bits (64), Expect = 4.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 497 PPPPXXXFFXXXPPXXPPXPPP 432
PPPP F PP P PPP
Sbjct: 151 PPPPPPQLFETAPPSPPYVPPP 172
>07_01_0080 + 587674-588510
Length = 278
Score = 29.9 bits (64), Expect = 4.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 497 PPPPXXXFFXXXPPXXPPXPPP 432
PPPP PP PP PPP
Sbjct: 93 PPPPPPPSSGSPPPPPPPPPPP 114
Score = 29.5 bits (63), Expect = 6.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 497 PPPPXXXFFXXXPPXXPPXPPP 432
PPPP PP PP PPP
Sbjct: 94 PPPPPPSSGSPPPPPPPPPPPP 115
Score = 29.5 bits (63), Expect = 6.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 497 PPPPXXXFFXXXPPXXPPXPPP 432
PPPP PP PP PPP
Sbjct: 95 PPPPPSSGSPPPPPPPPPPPPP 116
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 497 PPPPXXXFFXXXPPXXPPXPPP 432
PPPP PP PP PPP
Sbjct: 92 PPPPPPPPSSGSPPPPPPPPPP 113
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 497 PPPPXXXFFXXXPPXXPPXPPP 432
PPPP PP PP PPP
Sbjct: 96 PPPPSSGSPPPPPPPPPPPPPP 117
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.9 bits (64), Expect = 4.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 497 PPPPXXXFFXXXPPXXPPXPPP 432
PPPP PP PP PPP
Sbjct: 73 PPPPPSVTSSPPPPPLPPPPPP 94
Score = 29.9 bits (64), Expect = 4.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 497 PPPPXXXFFXXXPPXXPPXPPP 432
PPPP PP PP PPP
Sbjct: 74 PPPPSVTSSPPPPPLPPPPPPP 95
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.5 bits (63), Expect = 6.0
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 491 PPXXXFFXXXPPXXPPXPPP 432
PP F+ PP PP PPP
Sbjct: 311 PPLPSFYPSPPPPPPPPPPP 330
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 29.5 bits (63), Expect = 6.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 497 PPPPXXXFFXXXPPXXPPXPPP 432
PPPP F P PP PPP
Sbjct: 333 PPPPPPSRFNNTTPKPPPPPPP 354
Score = 29.5 bits (63), Expect = 6.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 497 PPPPXXXFFXXXPPXXPPXPPP 432
PPPP F P PP PPP
Sbjct: 334 PPPPPSRFNNTTPKPPPPPPPP 355
>09_02_0603 - 11150739-11150746,11150791-11151340
Length = 185
Score = 29.5 bits (63), Expect = 6.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 497 PPPPXXXFFXXXPPXXPPXPPP 432
PPPP FF P P PPP
Sbjct: 63 PPPPLGSFFVPPPQSRVPPPPP 84
>05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747
Length = 368
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 435 GGGGGXXGRXXXKKXXXXGGGG 500
GGGGG G+ KK GGGG
Sbjct: 211 GGGGGGGGKKKGKKGGGGGGGG 232
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 29.1 bits (62), Expect = 7.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 497 PPPPXXXFFXXXPPXXPPXPP 435
PPPP FF PP PP PP
Sbjct: 67 PPPPPAAFFAAVPP--PPPPP 85
>09_06_0107 +
20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 497 PPPPXXXFFXXXPPXXPPXPPP 432
PPPP PP PP PPP
Sbjct: 73 PPPPQTPPSPPPPPPPPPPPPP 94
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 497 PPPPXXXFFXXXPPXXPPXPPP 432
PPPP FF P PP PP
Sbjct: 58 PPPPPAPFFPFLPDSAPPQLPP 79
>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
29334956-29335045,29335120-29335155,29335222-29336553,
29337331-29337497,29337519-29337724,29337815-29338036,
29338332-29338381,29338754-29338870,29339471-29339551,
29339656-29339694,29340464-29340636,29340769-29340826,
29340934-29340987,29341066-29341613,29341695-29341755,
29342180-29342260,29342448-29342630,29342908-29343162,
29343304-29343423,29343497-29344901,29344988-29345085,
29345164-29345218,29345307-29345366,29346498-29346697
Length = 2077
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 497 PPPPXXXFFXXXPPXXPPXPPP 432
PPPP PP PP PPP
Sbjct: 1935 PPPPPVEGKPKPPPHAPPPPPP 1956
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 497 PPPPXXXFFXXXPPXXPPXPPP 432
PPPP PP PP PPP
Sbjct: 328 PPPPPKAAPPPPPPKGPPPPPP 349
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,054,074
Number of Sequences: 37544
Number of extensions: 168852
Number of successful extensions: 2993
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2405
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3992400636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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