Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_A10
         (1178 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_1151 - 9727051-9729510,9733966-9734022,9735299-9735676           30   3.1  
02_05_0982 - 33303500-33304011,33304091-33304208,33304606-333047...    29   9.4  

>06_01_1151 - 9727051-9729510,9733966-9734022,9735299-9735676
          Length = 964

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 14/58 (24%), Positives = 30/58 (51%)
 Frame = +1

Query: 451 LITSNEIAEQIIRLGQKHILVRIVVDSDMAYTPPSQIKKLKEYSFIQIQTSKKSILMH 624
           LI   E  +   RL +  +L  +   +   ++ P+ I+KLK   ++ +QT  +++ +H
Sbjct: 611 LIEEKEFEDMFTRLRKLRVLHLVTATTSNTFSFPASIEKLKHLRYLSLQTG-EAVKLH 667


>02_05_0982 -
           33303500-33304011,33304091-33304208,33304606-33304726,
           33304811-33304877,33304968-33305102,33305186-33305297,
           33305852-33306009,33306177-33306300,33306406-33306542,
           33307284-33307403,33307878-33308025,33308674-33308931,
           33309090-33309127,33309232-33309674,33309761-33309845,
           33310063-33310123,33310277-33310453,33311611-33312408,
           33314394-33314693
          Length = 1303

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
 Frame = +1

Query: 433 LDVCMYLITSNEIAEQIIRLGQKHILVRIVVDSDMAYTPPSQIKK-LKEYSFIQIQTSKK 609
           +++C  +  +   A+  I LG+ H  V+   D+ + Y    QI K L++   +  Q    
Sbjct: 244 IEICRKIRHTQGEAKGFINLGEVHSRVQKYEDAKLCYNKALQITKCLEDEDALMDQ---- 299

Query: 610 SILMHHKFCIIDGPKAIKRKNTLKTYAEKLNVYSQCNKSARQTTK 744
              +H     +   KA K    +K Y +KL   ++   +AR T+K
Sbjct: 300 ---IHQNIETV--TKAAKVLEEMKIYEQKLKKLARDTSNARGTSK 339


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,936,700
Number of Sequences: 37544
Number of extensions: 470067
Number of successful extensions: 841
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3608253564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)