Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_A10
         (1178 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099919-13|AAC68798.1|  636|Caenorhabditis elegans Hypothetical...    29   6.4  

>AF099919-13|AAC68798.1|  636|Caenorhabditis elegans Hypothetical
           protein F40G9.1 protein.
          Length = 636

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
 Frame = +1

Query: 463 NEIAEQIIRLGQKHILVRIVVDSDMAYTPPSQIKKLKEYSFIQIQTSKKSILMHHKFCII 642
           +E+AE ++R  +  +  RI+    + ++   Q KK+ + +F  IQ  +K +++H K C I
Sbjct: 287 HELAE-LLREAKDDVNRRIL-QKKINFSSKKQFKKIVK-TFFFIQNLRKKMILHIKMCKI 343

Query: 643 --DGPKAIKRKNTLKTYAEKLNVYSQCNKSARQTTKYKTVKG 762
                K ++ K  L  Y  KL  Y+  + S R T  +  V G
Sbjct: 344 LHYFTKNVEAKRLLTRY-PKLVGYT--DDSGRSTIHFAAVGG 382


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,368,766
Number of Sequences: 27780
Number of extensions: 467732
Number of successful extensions: 1068
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3224247522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)