Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_A09
         (1167 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64848-6|AAB04885.1|  208|Caenorhabditis elegans Hypothetical pr...    30   3.6  
L15201-3|AAA27944.1|  262|Caenorhabditis elegans Hypothetical pr...    29   6.3  

>U64848-6|AAB04885.1|  208|Caenorhabditis elegans Hypothetical
           protein C50E3.10 protein.
          Length = 208

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +3

Query: 525 GIWAAESDSKS*NSVQISWA*RLVSISKKLAKNPDETAKQKLNFNNKIYFFFV 683
           G+WA  + SKS +  ++ W   LV+ +K    + D+  K++L     IY + V
Sbjct: 44  GLWARHNISKSTDMQKLFWNNSLVAEAKHEMYDCDQLEKRELTLGENIYQYDV 96


>L15201-3|AAA27944.1|  262|Caenorhabditis elegans Hypothetical
           protein C08C3.4 protein.
          Length = 262

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 840 TVKHYKPIII*INQFEMRPIMPRTEN 763
           TVK+   ++   N+FEMRP+  R EN
Sbjct: 107 TVKNVSLVLTFANRFEMRPVQARCEN 132


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,516,478
Number of Sequences: 27780
Number of extensions: 321202
Number of successful extensions: 469
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3182509690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)