Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_A08
         (1176 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29608-1|AAA70336.1| 1099|Drosophila melanogaster LATS protein.        29   9.3  
L39837-1|AAA73959.1| 1099|Drosophila melanogaster tumor suppress...    29   9.3  
BT004830-1|AAO45186.1|  821|Drosophila melanogaster SD19495p pro...    29   9.3  
AE014297-4663|AAF57085.1| 1105|Drosophila melanogaster CG12072-P...    29   9.3  

>U29608-1|AAA70336.1| 1099|Drosophila melanogaster LATS protein.
          Length = 1099

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +1

Query: 619 RXRPPDXHHKNRRSSQRXRNPTGL*XYQAFPPGXSLVRSPVP 744
           R   P  HH ++ SS+   NP G   +   P G S V  P P
Sbjct: 157 RSDSPHSHHTHQPSSRTVGNPGGNGGFSPSPSGFSEVAPPAP 198


>L39837-1|AAA73959.1| 1099|Drosophila melanogaster tumor suppressor
           protein.
          Length = 1099

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +1

Query: 619 RXRPPDXHHKNRRSSQRXRNPTGL*XYQAFPPGXSLVRSPVP 744
           R   P  HH ++ SS+   NP G   +   P G S V  P P
Sbjct: 157 RSDSPHSHHTHQPSSRTVGNPGGNGGFSPSPSGFSEVAPPAP 198


>BT004830-1|AAO45186.1|  821|Drosophila melanogaster SD19495p
           protein.
          Length = 821

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +1

Query: 619 RXRPPDXHHKNRRSSQRXRNPTGL*XYQAFPPGXSLVRSPVP 744
           R   P  HH ++ SS+   NP G   +   P G S V  P P
Sbjct: 157 RSDSPHSHHTHQPSSRTVGNPGGNGGFSPSPSGFSEVAPPAP 198


>AE014297-4663|AAF57085.1| 1105|Drosophila melanogaster CG12072-PA
           protein.
          Length = 1105

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +1

Query: 619 RXRPPDXHHKNRRSSQRXRNPTGL*XYQAFPPGXSLVRSPVP 744
           R   P  HH ++ SS+   NP G   +   P G S V  P P
Sbjct: 157 RSDSPHSHHTHQPSSRTVGNPGGNGGFSPSPSGFSEVAPPAP 198


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,990,330
Number of Sequences: 53049
Number of extensions: 442943
Number of successful extensions: 620
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6229976970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)