Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_A06
         (1167 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    25   1.7  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   6.8  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    23   6.8  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   6.8  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   9.0  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   9.0  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +3

Query: 393 ITSEXFDYYDYIFGMDESNMKDLNKKAPKGSKAKLLLFGDFDPQGDRIIRDPYYD 557
           I SE  D Y+    M + + K L+   PKGSK  ++      P+  + + D  YD
Sbjct: 256 IKSEPIDAYE----MHQISKKKLSPATPKGSKCSMIT----TPEIKKEVEDMEYD 302


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 9/33 (27%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +3

Query: 744 FYFQLKGSHNITDIEENI-NSYLFTNLAEIYII 839
           +Y+  KG+H+I++I     N Y   +  + Y++
Sbjct: 439 YYYTYKGAHSISEIMSGTSNKYGVCHADDAYMV 471


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 369 ERYAXSK*LVRSNREDYRHASPR 301
           ++YA S   +RS   D++H S R
Sbjct: 208 KKYATSSNSLRSRTHDFQHTSSR 230


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 9/33 (27%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +3

Query: 744 FYFQLKGSHNITDIEENI-NSYLFTNLAEIYII 839
           +Y+  KG+H+I++I     N Y   +  + Y++
Sbjct: 439 YYYTYKGAHSISEIMSGTSNKYGVCHADDAYMV 471


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 88  DA*ILDCAELEAPGWXREXXEGPSRGAXG 2
           D  +L+CA+  AP   +    GP  G  G
Sbjct: 47  DMSVLECADRSAPRVKKTASAGPIFGVIG 75


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 88  DA*ILDCAELEAPGWXREXXEGPSRGAXG 2
           D  +L+CA+  AP   +    GP  G  G
Sbjct: 137 DMSVLECADRSAPRVKKTASAGPIFGVIG 165


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,643
Number of Sequences: 438
Number of extensions: 4420
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 39644829
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)