Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_A03
(1167 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82287-6|CAB05318.1| 312|Caenorhabditis elegans Hypothetical pr... 207 1e-53
Z80223-9|CAB02322.1| 312|Caenorhabditis elegans Hypothetical pr... 207 1e-53
Z82287-5|CAB05315.1| 328|Caenorhabditis elegans Hypothetical pr... 173 3e-43
AL110479-7|CAB54355.1| 288|Caenorhabditis elegans Hypothetical ... 61 1e-09
AF024499-4|AAY55833.1| 122|Caenorhabditis elegans Hypothetical ... 33 0.39
Z99281-46|CAB54455.3| 795|Caenorhabditis elegans Hypothetical p... 31 1.2
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 29 4.8
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 4.8
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 29 4.8
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 29 4.8
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 29 4.8
Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr... 29 8.3
Z34799-2|CAA84318.1| 692|Caenorhabditis elegans Hypothetical pr... 29 8.3
U40028-2|AAY55874.1| 1200|Caenorhabditis elegans Hypothetical pr... 29 8.3
>Z82287-6|CAB05318.1| 312|Caenorhabditis elegans Hypothetical protein
ZK550.6 protein.
Length = 312
Score = 207 bits (505), Expect = 1e-53
Identities = 113/269 (42%), Positives = 167/269 (62%), Gaps = 15/269 (5%)
Frame = +3
Query: 273 LSEEQKSFYWENGYLVIKELIDFTSLYSYKQRFLQICKGIVDSP--VMIVKEQALFEKNL 446
LS EQ+ FY +NGYL+I+ + L ++QRF IC+ V +P + ++K+ ++ +
Sbjct: 16 LSAEQRRFYEKNGYLLIRNCVPQYELNRFRQRFQDICEKKVKAPENMTVMKDISIAKSEF 75
Query: 447 KP-EEYINKLQEILYDDVFMTYGEHPRLLDVISQFIGD---DITAIHSMFINKPPG---- 602
K E+ I K+Q+ D V Y ++P ++DV+ IG+ ++ A+H+M INKPP
Sbjct: 76 KDGEKAITKIQDFADDPVLFEYCKYPGVVDVVKDLIGNPKSNLMAMHTMLINKPPDNGKL 135
Query: 603 TARHPPHQDLFYFPIRPVDKIIGSWTAVDHVNKDNGCLYVIPKSHKQDILYPHGDVP--E 776
T+RHP HQDL YFP RP D I +WTA++ + + NGCL V+P +HK +L PH + P E
Sbjct: 136 TSRHPMHQDLQYFPFRPADFICCAWTAMEKITRANGCLVVVPGTHK-GVLLPH-EYPKWE 193
Query: 777 AG--KLYHGILNEETLAPEHARVSLDMAPGDTVLLHPRLLHGSGPNRTQRHRKAITVHFA 950
G K YHGI + +T P R+ ++M PGDTV HP L+HGSG NRT+ RKAI+ H+A
Sbjct: 194 GGVNKAYHGIQDYDTSTP---RIHVEMEPGDTVFFHPILIHGSGANRTEGFRKAISCHYA 250
Query: 951 S-SACXYVDVRXSVQERLAADVQAAATRR 1034
+ C YV+V + QE LA ++ A +R
Sbjct: 251 NDDLCRYVNVEGTTQETLAEEIIEIAKKR 279
>Z80223-9|CAB02322.1| 312|Caenorhabditis elegans Hypothetical protein
ZK550.6 protein.
Length = 312
Score = 207 bits (505), Expect = 1e-53
Identities = 113/269 (42%), Positives = 167/269 (62%), Gaps = 15/269 (5%)
Frame = +3
Query: 273 LSEEQKSFYWENGYLVIKELIDFTSLYSYKQRFLQICKGIVDSP--VMIVKEQALFEKNL 446
LS EQ+ FY +NGYL+I+ + L ++QRF IC+ V +P + ++K+ ++ +
Sbjct: 16 LSAEQRRFYEKNGYLLIRNCVPQYELNRFRQRFQDICEKKVKAPENMTVMKDISIAKSEF 75
Query: 447 KP-EEYINKLQEILYDDVFMTYGEHPRLLDVISQFIGD---DITAIHSMFINKPPG---- 602
K E+ I K+Q+ D V Y ++P ++DV+ IG+ ++ A+H+M INKPP
Sbjct: 76 KDGEKAITKIQDFADDPVLFEYCKYPGVVDVVKDLIGNPKSNLMAMHTMLINKPPDNGKL 135
Query: 603 TARHPPHQDLFYFPIRPVDKIIGSWTAVDHVNKDNGCLYVIPKSHKQDILYPHGDVP--E 776
T+RHP HQDL YFP RP D I +WTA++ + + NGCL V+P +HK +L PH + P E
Sbjct: 136 TSRHPMHQDLQYFPFRPADFICCAWTAMEKITRANGCLVVVPGTHK-GVLLPH-EYPKWE 193
Query: 777 AG--KLYHGILNEETLAPEHARVSLDMAPGDTVLLHPRLLHGSGPNRTQRHRKAITVHFA 950
G K YHGI + +T P R+ ++M PGDTV HP L+HGSG NRT+ RKAI+ H+A
Sbjct: 194 GGVNKAYHGIQDYDTSTP---RIHVEMEPGDTVFFHPILIHGSGANRTEGFRKAISCHYA 250
Query: 951 S-SACXYVDVRXSVQERLAADVQAAATRR 1034
+ C YV+V + QE LA ++ A +R
Sbjct: 251 NDDLCRYVNVEGTTQETLAEEIIEIAKKR 279
>Z82287-5|CAB05315.1| 328|Caenorhabditis elegans Hypothetical protein
ZK550.5 protein.
Length = 328
Score = 173 bits (420), Expect = 3e-43
Identities = 104/290 (35%), Positives = 158/290 (54%), Gaps = 23/290 (7%)
Frame = +3
Query: 273 LSEEQKSFYWENGYLVIKELIDFTSLYSYKQRFLQICKGIVDSPV-MIVKEQALFEKNLK 449
LS EQK FY +NG+L+++ + L Y+ +F IC+ V P M+V + K +
Sbjct: 32 LSVEQKQFYQKNGFLLVRGCVAKDELKKYENQFNAICERKVKPPPNMLVMKDVSIAKKVT 91
Query: 450 PE--EYINKLQEILYDDVFMTYGEHPRLLDVISQFIGDD---ITAIHSMFINKPPGT--- 605
P+ + I K+Q+ + V +Y E+ ++ DV+ IG ITA+H+M INKPP T
Sbjct: 92 PDSIDTITKVQDFTDEPVLFSYCENKKVTDVVRDLIGSPDTRITAMHTMLINKPPDTGAL 151
Query: 606 -ARHPPHQDLFYFPIRPVDKIIGSWTAVDHVNKDNGCLYVIPKSHKQDILYPHGDVPE-- 776
+RHP HQDL YFP RP + + +WTA++ +NK NGCL V+P + + L HG PE
Sbjct: 152 TSRHPMHQDLIYFPWRPEELTVCAWTAMEKINKQNGCLQVVPGTQARG-LQVHG-YPEWE 209
Query: 777 --AGKLYHGILNEETLAPEHARVSLDMAPGDTVLLHPRLLHGSGPNRTQRHRKAITVHFA 950
Y+ I + + P R ++M GDTV HP L HGSG NR++ RKAI+ H+A
Sbjct: 210 GGVNMAYYAIKDYDMSLP---REYVEMEAGDTVFFHPCLFHGSGANRSEGFRKAISCHYA 266
Query: 951 S-SACXYVDVRXSVQERLAADVQ--------AAATRRGXQVPYQDXWRXK 1073
+ Y+DV+ + QE ++ A + G +V ++ WR +
Sbjct: 267 NYDHTKYIDVKGTAQEEAGKQIEDIIRKHPKRYAVKPGQEVTFELTWRLR 316
>AL110479-7|CAB54355.1| 288|Caenorhabditis elegans Hypothetical
protein Y105C5B.9 protein.
Length = 288
Score = 61.3 bits (142), Expect = 1e-09
Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 6/176 (3%)
Frame = +3
Query: 435 EKNLKPEEYINKLQEILY--DDVFMTYGEHPRLLDVISQFIGDDITAIHSMFINKPPGTA 608
E + ++ +NK+ L+ D F + ++ ++ + + + SM+I K P
Sbjct: 84 ELTVPKDKALNKIGHGLHFLDPTFEKMTFNSKIQNIFKEIGYQEPGVVQSMYIFKQPKIG 143
Query: 609 RH-PPHQDLFYFPIRPVDKIIGSWTAVDHVNKDNGCLYVIPKSHKQDILYPHGDVPEAGK 785
H D + + P+D + G W A+D + +NGCL IP SHK + V
Sbjct: 144 GAVTDHVDSTFLRVDPIDHLTGVWIAIDEASVENGCLSFIPGSHKDTSSANYRFVRTHDT 203
Query: 786 LYHGILNEETLAPEHARVSLDMAP---GDTVLLHPRLLHGSGPNRTQRHRKAITVH 944
+L P + + P G +L+H ++H S N +++ R A T+H
Sbjct: 204 SGGALLKFIGTRPTYDQSKFQHVPISKGSLILIHGLVVHKSEANTSEKSRHAYTIH 259
>AF024499-4|AAY55833.1| 122|Caenorhabditis elegans Hypothetical
protein F42G2.7 protein.
Length = 122
Score = 33.1 bits (72), Expect = 0.39
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 834 RVSLDMAPGDTVLLHPRLLHGSGPNRT 914
R S++M GD V HP L HGSG +R+
Sbjct: 76 RESVEMKAGDFVFYHPCLFHGSGASRS 102
>Z99281-46|CAB54455.3| 795|Caenorhabditis elegans Hypothetical
protein Y57G11C.32 protein.
Length = 795
Score = 31.5 bits (68), Expect = 1.2
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 204 KMPLKGLKVLPNPVFSELPQNYRLSEEQKSFYWENGYLVI 323
++PL+ +VLPNP++ E P + +EE K+F GY+ I
Sbjct: 201 ELPLESDEVLPNPIYEE-PGDQSETEEVKAFREIFGYIQI 239
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1
Query: 819 RASLRSKSRGTVYRPPAHHHGGIEYLAYETLE 724
RA+LR K++ V+ PP +HGG E ET+E
Sbjct: 5478 RANLRIKTKPRVFIPP-KYHGGYEAQKGETIE 5508
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1
Query: 819 RASLRSKSRGTVYRPPAHHHGGIEYLAYETLE 724
RA+LR K++ V+ PP +HGG E ET+E
Sbjct: 6007 RANLRIKTKPRVFIPP-KYHGGYEAQKGETIE 6037
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1
Query: 819 RASLRSKSRGTVYRPPAHHHGGIEYLAYETLE 724
RA+LR K++ V+ PP +HGG E ET+E
Sbjct: 5688 RANLRIKTKPRVFIPP-KYHGGYEAQKGETIE 5718
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1
Query: 819 RASLRSKSRGTVYRPPAHHHGGIEYLAYETLE 724
RA+LR K++ V+ PP +HGG E ET+E
Sbjct: 5478 RANLRIKTKPRVFIPP-KYHGGYEAQKGETIE 5508
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1
Query: 819 RASLRSKSRGTVYRPPAHHHGGIEYLAYETLE 724
RA+LR K++ V+ PP +HGG E ET+E
Sbjct: 6007 RANLRIKTKPRVFIPP-KYHGGYEAQKGETIE 6037
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1
Query: 819 RASLRSKSRGTVYRPPAHHHGGIEYLAYETLE 724
RA+LR K++ V+ PP +HGG E ET+E
Sbjct: 5688 RANLRIKTKPRVFIPP-KYHGGYEAQKGETIE 5718
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1
Query: 819 RASLRSKSRGTVYRPPAHHHGGIEYLAYETLE 724
RA+LR K++ V+ PP +HGG E ET+E
Sbjct: 4897 RANLRIKTKPRVFIPP-KYHGGYEAQKGETIE 4927
>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical protein
C14C10.5 protein.
Length = 1908
Score = 28.7 bits (61), Expect = 8.3
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -3
Query: 952 LAKCTVIAFRWRWVRLGPEPWSR-RGCSSTVSPGAMSRETRACSGASVSSFKIPWYSLPA 776
L + + F WR V L + +GC V P A R+ A S S + WY LPA
Sbjct: 1520 LIQSALCQFEWRGVELWNKLVEMMKGC--LVQPFANLRDRVAISLVSAT-----WYDLPA 1572
Query: 775 SGTSP 761
GT P
Sbjct: 1573 VGTDP 1577
>Z34799-2|CAA84318.1| 692|Caenorhabditis elegans Hypothetical
protein F34D10.4 protein.
Length = 692
Score = 28.7 bits (61), Expect = 8.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 883 RGCSSTVSPGAMSRETRACSGASVSSFKIPWYSLPASGTSP 761
R S +P + SRETR+ + P Y+LP G++P
Sbjct: 385 RAPSRAPAPSSTSRETRSTRRSPSKGPSAPAYTLPFGGSTP 425
>U40028-2|AAY55874.1| 1200|Caenorhabditis elegans Hypothetical
protein T05A7.11 protein.
Length = 1200
Score = 28.7 bits (61), Expect = 8.3
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 456 EYINKLQEILYDDVFMTYGEHPRLLDVISQF 548
EY+ KL +IL++D T+G +P ++ Q+
Sbjct: 594 EYLTKLYDILFNDETFTFGSNPSSPFLVIQY 624
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,522,262
Number of Sequences: 27780
Number of extensions: 477567
Number of successful extensions: 1144
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3182509690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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