Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_A03
         (1167 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          27   0.42 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   3.9  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   6.8  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   6.8  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   9.0  

>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 26.6 bits (56), Expect = 0.42
 Identities = 11/51 (21%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +3

Query: 621 HQDLFYFPIRPVDKIIGSWTAVDHVNKDNGCLYV--IPKSHKQDILYPHGD 767
           H+ + YF + P ++ I S   ++H+ K N  +       ++++ +++ H D
Sbjct: 75  HKGIVYFELLPPNRTINSVVYIEHLTKLNNAIEEKRFELTNRKGVVFHHDD 125


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
 Frame = +3

Query: 234 PNPVFSELPQNYRLSEEQKSFYWENGYLVIKELIDFTSLYSY-KQRFLQICKGIV--DSP 404
           P+P  S +   Y +++    F+     LV+ E+  FT+  ++ + R      G+V   S 
Sbjct: 131 PDPSDSTMAIPYAVTKSAMFFFAATSLLVVAEVCYFTAHVTHPRHRLCVFVAGVVFIVSG 190

Query: 405 VMIVKEQALFEKNLKPEEYINKLQEILYDDVFMTYGEHPRLLDVISQFIGDDITAIHSMF 584
           ++++    ++    K E          +     TY      L  +S FI  ++   +++F
Sbjct: 191 LLMLVGMVMYISVFKAEVGSKLRPRSSFQGPPFTYRYGFSFLLYVSGFITTEVAGTYAIF 250

Query: 585 I 587
           +
Sbjct: 251 L 251


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 843 LDMAPGDTVLLHPRLLHGSGPN 908
           LDM P    L++P     SGPN
Sbjct: 48  LDMKPDTASLINPGNFSPSGPN 69


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 843 LDMAPGDTVLLHPRLLHGSGPN 908
           LDM P    L++P     SGPN
Sbjct: 48  LDMKPDTASLINPGNFSPSGPN 69


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 510 GEHPRLLDVISQFIGDDITAIHSMFINKPP 599
           G+   + D +S FI   ITAI    IN+ P
Sbjct: 47  GDLKGIKDKLSHFIESGITAIWLSPINRSP 76


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 280,307
Number of Sequences: 438
Number of extensions: 5932
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 39644829
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)