Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_A02
         (1174 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.8  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.8  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   4.3  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 1.8
 Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
 Frame = +3

Query: 888  PPPPXXGGGPXPXTTPG*XTXXXXGGXPP-PRXGGXGXXXPP 1010
            PPPP    GP P    G       G  PP P   G G   PP
Sbjct: 585  PPPPPP-MGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625



 Score = 25.8 bits (54), Expect = 2.4
 Identities = 13/36 (36%), Positives = 13/36 (36%)
 Frame = -3

Query: 1016 PXGGXXXAXPPXPGGGXPPXPXXSXLPGGGXXXGPP 909
            P      A PP P  G PP P      GG     PP
Sbjct: 577  PNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 24.6 bits (51), Expect = 5.6
 Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
 Frame = +1

Query: 883  PXPPPRXRXGGPXXXPPPGKXLXXGXGGXPP-PGXGGXAXXXPP 1011
            P PPP    G P   P  G  L    G  PP P   G     PP
Sbjct: 583  PAPPPPPPMG-PPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 1.8
 Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
 Frame = -3

Query: 989 PPXPGGGXPPXPXXSXLPGGGXXXGPP---XLXRGGGXG 882
           PP  G    P P  +  PGGG   G      +  GGG G
Sbjct: 495 PPPGGRPNAPNPSSAVTPGGGRAEGDKVTFQIPNGGGGG 533



 Score = 23.8 bits (49), Expect = 9.9
 Identities = 12/36 (33%), Positives = 12/36 (33%)
 Frame = +3

Query: 915  PXPXTTPG*XTXXXXGGXPPPRXGGXGXXXPPXXXG 1022
            P P   PG       G   PPR G      PP   G
Sbjct: 181  PNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGG 216


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 4.3
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 575 PGXGXGXGGSPXPXGG 622
           PG G G  G P P GG
Sbjct: 212 PGGGGGSSGGPGPGGG 227



 Score = 24.6 bits (51), Expect = 5.6
 Identities = 12/33 (36%), Positives = 12/33 (36%)
 Frame = +1

Query: 934  PGKXLXXGXGGXPPPGXGGXAXXXPPXGXGXGG 1032
            PG       GG P  G G      P  G G GG
Sbjct: 200  PGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGG 232


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.147    0.484 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 457,911
Number of Sequences: 2352
Number of extensions: 7429
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 132434028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)