Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_A02
(1174 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 38 0.010
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 38 0.010
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 38 0.014
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.018
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.018
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.018
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 37 0.024
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 37 0.024
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 37 0.024
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 36 0.042
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 36 0.042
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 36 0.055
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 36 0.055
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 36 0.073
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.097
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.097
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 34 0.17
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 34 0.22
AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen prot... 33 0.52
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.68
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 32 0.90
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 32 0.90
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 32 0.90
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 32 0.90
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 32 0.90
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 1.2
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 31 1.2
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 1.2
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 30 2.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.7
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 3.6
Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.8
M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein ( C.ele... 29 4.8
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 6.3
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 6.3
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 6.3
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 6.3
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 6.3
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 6.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 6.3
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 29 8.4
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 29 8.4
Z69383-11|CAM06588.1| 110|Caenorhabditis elegans Hypothetical p... 29 8.4
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 8.4
Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical pr... 29 8.4
Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical pr... 29 8.4
U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical pr... 29 8.4
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 8.4
U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protei... 29 8.4
U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protei... 29 8.4
U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protei... 29 8.4
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 29 8.4
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical protein
C02C6.1a protein.
Length = 830
Score = 38.3 bits (85), Expect = 0.010
Identities = 21/58 (36%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Frame = -3
Query: 1046 PXXXXPPXPXPXGGXXXAXPPXPGGGXPPXP---XXSXLPGGGXXXGPPXLXRGGGXG 882
P P P P GG PP G G PP P PGGG PP + G G
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPG 820
Score = 28.7 bits (61), Expect = 8.4
Identities = 19/47 (40%), Positives = 19/47 (40%)
Frame = +1
Query: 892 PPRXRXGGPXXXPPPGKXLXXGXGGXPPPGXGGXAXXXPPXGXGXGG 1032
PPR GGP PPPG G P G GG P G GG
Sbjct: 782 PPR---GGPGAPPPPGMRPPPG----APGGGGGMYPPLIPTRPGPGG 821
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 38.3 bits (85), Expect = 0.010
Identities = 21/58 (36%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Frame = -3
Query: 1046 PXXXXPPXPXPXGGXXXAXPPXPGGGXPPXP---XXSXLPGGGXXXGPPXLXRGGGXG 882
P P P P GG PP G G PP P PGGG PP + G G
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPG 820
Score = 28.7 bits (61), Expect = 8.4
Identities = 19/47 (40%), Positives = 19/47 (40%)
Frame = +1
Query: 892 PPRXRXGGPXXXPPPGKXLXXGXGGXPPPGXGGXAXXXPPXGXGXGG 1032
PPR GGP PPPG G P G GG P G GG
Sbjct: 782 PPR---GGPGAPPPPGMRPPPG----APGGGGGMYPPLIPTRPGPGG 821
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 37.9 bits (84), Expect = 0.014
Identities = 30/111 (27%), Positives = 31/111 (27%), Gaps = 3/111 (2%)
Frame = +3
Query: 792 PPXXKKXRGXPXXKPXXXXXAGXRXXKXXXXRPPPPXXGGGPXPXTTPG*XTXXXXGGX- 968
PP K G P P PPPP G P P T G
Sbjct: 96 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNAS 155
Query: 969 --PPPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXGXPPXQKKNXXXPPPXG 1115
PPP G G PP G G PP + PPP G
Sbjct: 156 RRPPPPPKGTGSPPPPPT-GEPQDLSTEGNASRRPPPPPKGTGTPPPPPTG 205
Score = 37.9 bits (84), Expect = 0.014
Identities = 30/111 (27%), Positives = 31/111 (27%), Gaps = 3/111 (2%)
Frame = +3
Query: 792 PPXXKKXRGXPXXKPXXXXXAGXRXXKXXXXRPPPPXXGGGPXPXTTPG*XTXXXXGGX- 968
PP K G P P PPPP G P P T G
Sbjct: 127 PPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNAS 186
Query: 969 --PPPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXGXPPXQKKNXXXPPPXG 1115
PPP G G PP G G PP + PPP G
Sbjct: 187 RRPPPPPKGTGTPPPPPT-GEPQDLSAEGYASRRPPPPPKGTGSPTPPPTG 236
Score = 36.7 bits (81), Expect = 0.032
Identities = 30/111 (27%), Positives = 31/111 (27%), Gaps = 3/111 (2%)
Frame = +3
Query: 792 PPXXKKXRGXPXXKPXXXXXAGXRXXKXXXXRPPPPXXGGGPXPXTTPG*XTXXXXG--- 962
PP K G P P PPPP G P P T G
Sbjct: 158 PPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEGYAS 217
Query: 963 GXPPPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXGXPPXQKKNXXXPPPXG 1115
PPP G G PP G G PP + PPP G
Sbjct: 218 RRPPPPPKGTGSPTPP-PTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTG 267
Score = 36.3 bits (80), Expect = 0.042
Identities = 24/81 (29%), Positives = 25/81 (30%), Gaps = 4/81 (4%)
Frame = +3
Query: 885 RPPPPXXGGGPXPXTTPG*XTXXXXGG----XPPPRXGGXGXXXPPXXXGXXXXXXXGGX 1052
RPPPP G G P G G PPP G G PP G
Sbjct: 32 RPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGN 91
Query: 1053 XXXXGXPPXQKKNXXXPPPXG 1115
PP + PPP G
Sbjct: 92 ASRRPPPPPKGTGTPPPPPTG 112
Score = 30.3 bits (65), Expect = 2.7
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 4/77 (5%)
Frame = +3
Query: 792 PPXXKKXRGXPXXKPXXXXXAGXRXXKXXXXRPPPPXXGGGPXPXTTPG*XTXXXXGG-- 965
PP K G P P RPPPP G G P G G
Sbjct: 220 PPPPPKGTGSPTPPPTGEPQ-DLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNA 278
Query: 966 --XPPPRXGGXGXXXPP 1010
PPP G G PP
Sbjct: 279 SRRPPPPPKGTGTPPPP 295
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.5 bits (83), Expect = 0.018
Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Frame = -3
Query: 1046 PXXXXPPXPXPXGGXXXAX-----PPXPGGGXPPXPXXSXLPGGGXXXGPP 909
P PP P P GG PP P GG PP P P GG GPP
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP--PPGGFKGGPP 785
Score = 34.3 bits (75), Expect = 0.17
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -3
Query: 1046 PXXXXPPXPXPXGGXXXAXPPXPGGGXPPXPXXSXLPGGGXXXGPP 909
P PP P P GG PP GG PP P P G PP
Sbjct: 721 PITGGPPPPPPPGGL----PPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 34.3 bits (75), Expect = 0.17
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Frame = +1
Query: 883 PXPPPRXRX---GGPXXXPPPGKXLXXGXGGXPPPGXGGXAXXXPP 1011
P PPP GGP PPPG G PPP G PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 33.9 bits (74), Expect = 0.22
Identities = 21/55 (38%), Positives = 22/55 (40%), Gaps = 5/55 (9%)
Frame = +1
Query: 883 PXPPPRXRX--GGPXXXPPPGKXLXXGXGGXPPPGXGG---XAXXXPPXGXGXGG 1032
P PPP GGP PPPG G PPP GG + PP GG
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 32.3 bits (70), Expect = 0.68
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 1031 PPXPXPXGGXXXAXPPXPGGGXPPXPXXSXLPG 933
PP P P GG PP P GG P PG
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +3
Query: 888 PPPPXXGGGPXPXTTPG*XTXXXXGGXPPPRXGG 989
PPPP GG P P P GG PPP G
Sbjct: 760 PPPPPPGGCPPPPPPP--PPGGFKGGPPPPPPPG 791
Score = 29.9 bits (64), Expect = 3.6
Identities = 19/69 (27%), Positives = 20/69 (28%)
Frame = +1
Query: 775 SGGXAPPXLXKXXXGXPXXSXPXXXXLGXXXKKXXXPXPPPRXRXGGPXXXPPPGKXLXX 954
+GG PP P G P PPP P PPP
Sbjct: 723 TGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Query: 955 GXGGXPPPG 981
G PPPG
Sbjct: 783 GPPPPPPPG 791
Score = 29.5 bits (63), Expect = 4.8
Identities = 23/79 (29%), Positives = 25/79 (31%), Gaps = 1/79 (1%)
Frame = +3
Query: 891 PPPXXGGGPXPXTTPG*XTXXXX-GGXPPPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXG 1067
PPP P T+ G + G PPP G PP G GG G
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPG-----LPPITGGPPPPPPPGGLPPITG 740
Query: 1068 XPPXQKKNXXXPPPXGXXP 1124
PP PP G P
Sbjct: 741 GPPPPPPPGGLPPISGGPP 759
Score = 29.1 bits (62), Expect = 6.3
Identities = 22/79 (27%), Positives = 23/79 (29%)
Frame = +1
Query: 775 SGGXAPPXLXKXXXGXPXXSXPXXXXLGXXXKKXXXPXPPPRXRXGGPXXXPPPGKXLXX 954
+GG PP G P P G P PPP PPP
Sbjct: 710 TGGPPPPPGLPPITGGPPPPPPPG---GLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 955 GXGGXPPPGXGGXAXXXPP 1011
G PPP G PP
Sbjct: 767 GCPPPPPPPPPGGFKGGPP 785
Score = 29.1 bits (62), Expect = 6.3
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -1
Query: 1126 PGXXPXGGGKXXFFFXXGGXPXXXXXPPLXXXXXXPXXXGGXXXPXPPXRGGGXPP 959
PG P GG G P PP P GG P PP GG PP
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP--GGCPP 770
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.5 bits (83), Expect = 0.018
Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Frame = -3
Query: 1046 PXXXXPPXPXPXGGXXXAX-----PPXPGGGXPPXPXXSXLPGGGXXXGPP 909
P PP P P GG PP P GG PP P P GG GPP
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP--PPGGFKGGPP 785
Score = 34.3 bits (75), Expect = 0.17
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -3
Query: 1046 PXXXXPPXPXPXGGXXXAXPPXPGGGXPPXPXXSXLPGGGXXXGPP 909
P PP P P GG PP GG PP P P G PP
Sbjct: 721 PITGGPPPPPPPGGL----PPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 34.3 bits (75), Expect = 0.17
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Frame = +1
Query: 883 PXPPPRXRX---GGPXXXPPPGKXLXXGXGGXPPPGXGGXAXXXPP 1011
P PPP GGP PPPG G PPP G PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 33.9 bits (74), Expect = 0.22
Identities = 21/55 (38%), Positives = 22/55 (40%), Gaps = 5/55 (9%)
Frame = +1
Query: 883 PXPPPRXRX--GGPXXXPPPGKXLXXGXGGXPPPGXGG---XAXXXPPXGXGXGG 1032
P PPP GGP PPPG G PPP GG + PP GG
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 32.3 bits (70), Expect = 0.68
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 1031 PPXPXPXGGXXXAXPPXPGGGXPPXPXXSXLPG 933
PP P P GG PP P GG P PG
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +3
Query: 888 PPPPXXGGGPXPXTTPG*XTXXXXGGXPPPRXGG 989
PPPP GG P P P GG PPP G
Sbjct: 760 PPPPPPGGCPPPPPPP--PPGGFKGGPPPPPPPG 791
Score = 29.9 bits (64), Expect = 3.6
Identities = 19/69 (27%), Positives = 20/69 (28%)
Frame = +1
Query: 775 SGGXAPPXLXKXXXGXPXXSXPXXXXLGXXXKKXXXPXPPPRXRXGGPXXXPPPGKXLXX 954
+GG PP P G P PPP P PPP
Sbjct: 723 TGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Query: 955 GXGGXPPPG 981
G PPPG
Sbjct: 783 GPPPPPPPG 791
Score = 29.5 bits (63), Expect = 4.8
Identities = 23/79 (29%), Positives = 25/79 (31%), Gaps = 1/79 (1%)
Frame = +3
Query: 891 PPPXXGGGPXPXTTPG*XTXXXX-GGXPPPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXG 1067
PPP P T+ G + G PPP G PP G GG G
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPG-----LPPITGGPPPPPPPGGLPPITG 740
Query: 1068 XPPXQKKNXXXPPPXGXXP 1124
PP PP G P
Sbjct: 741 GPPPPPPPGGLPPISGGPP 759
Score = 29.1 bits (62), Expect = 6.3
Identities = 22/79 (27%), Positives = 23/79 (29%)
Frame = +1
Query: 775 SGGXAPPXLXKXXXGXPXXSXPXXXXLGXXXKKXXXPXPPPRXRXGGPXXXPPPGKXLXX 954
+GG PP G P P G P PPP PPP
Sbjct: 710 TGGPPPPPGLPPITGGPPPPPPPG---GLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 955 GXGGXPPPGXGGXAXXXPP 1011
G PPP G PP
Sbjct: 767 GCPPPPPPPPPGGFKGGPP 785
Score = 29.1 bits (62), Expect = 6.3
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -1
Query: 1126 PGXXPXGGGKXXFFFXXGGXPXXXXXPPLXXXXXXPXXXGGXXXPXPPXRGGGXPP 959
PG P GG G P PP P GG P PP GG PP
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP--GGCPP 770
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.5 bits (83), Expect = 0.018
Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Frame = -3
Query: 1046 PXXXXPPXPXPXGGXXXAX-----PPXPGGGXPPXPXXSXLPGGGXXXGPP 909
P PP P P GG PP P GG PP P P GG GPP
Sbjct: 320 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP--PPGGFKGGPP 368
Score = 34.3 bits (75), Expect = 0.17
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -3
Query: 1046 PXXXXPPXPXPXGGXXXAXPPXPGGGXPPXPXXSXLPGGGXXXGPP 909
P PP P P GG PP GG PP P P G PP
Sbjct: 304 PITGGPPPPPPPGGL----PPITGGPPPPPPPGGLPPISGGPPPPP 345
Score = 34.3 bits (75), Expect = 0.17
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Frame = +1
Query: 883 PXPPPRXRX---GGPXXXPPPGKXLXXGXGGXPPPGXGGXAXXXPP 1011
P PPP GGP PPPG G PPP G PP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Score = 33.9 bits (74), Expect = 0.22
Identities = 21/55 (38%), Positives = 22/55 (40%), Gaps = 5/55 (9%)
Frame = +1
Query: 883 PXPPPRXRX--GGPXXXPPPGKXLXXGXGGXPPPGXGG---XAXXXPPXGXGXGG 1032
P PPP GGP PPPG G PPP GG + PP GG
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Score = 32.3 bits (70), Expect = 0.68
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 1031 PPXPXPXGGXXXAXPPXPGGGXPPXPXXSXLPG 933
PP P P GG PP P GG P PG
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +3
Query: 888 PPPPXXGGGPXPXTTPG*XTXXXXGGXPPPRXGG 989
PPPP GG P P P GG PPP G
Sbjct: 343 PPPPPPGGCPPPPPPP--PPGGFKGGPPPPPPPG 374
Score = 29.9 bits (64), Expect = 3.6
Identities = 19/69 (27%), Positives = 20/69 (28%)
Frame = +1
Query: 775 SGGXAPPXLXKXXXGXPXXSXPXXXXLGXXXKKXXXPXPPPRXRXGGPXXXPPPGKXLXX 954
+GG PP P G P PPP P PPP
Sbjct: 306 TGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 365
Query: 955 GXGGXPPPG 981
G PPPG
Sbjct: 366 GPPPPPPPG 374
Score = 29.5 bits (63), Expect = 4.8
Identities = 23/79 (29%), Positives = 25/79 (31%), Gaps = 1/79 (1%)
Frame = +3
Query: 891 PPPXXGGGPXPXTTPG*XTXXXX-GGXPPPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXG 1067
PPP P T+ G + G PPP G PP G GG G
Sbjct: 269 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPG-----LPPITGGPPPPPPPGGLPPITG 323
Query: 1068 XPPXQKKNXXXPPPXGXXP 1124
PP PP G P
Sbjct: 324 GPPPPPPPGGLPPISGGPP 342
Score = 29.1 bits (62), Expect = 6.3
Identities = 22/79 (27%), Positives = 23/79 (29%)
Frame = +1
Query: 775 SGGXAPPXLXKXXXGXPXXSXPXXXXLGXXXKKXXXPXPPPRXRXGGPXXXPPPGKXLXX 954
+GG PP G P P G P PPP PPP
Sbjct: 293 TGGPPPPPGLPPITGGPPPPPPPG---GLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Query: 955 GXGGXPPPGXGGXAXXXPP 1011
G PPP G PP
Sbjct: 350 GCPPPPPPPPPGGFKGGPP 368
Score = 29.1 bits (62), Expect = 6.3
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -1
Query: 1126 PGXXPXGGGKXXFFFXXGGXPXXXXXPPLXXXXXXPXXXGGXXXPXPPXRGGGXPP 959
PG P GG G P PP P GG P PP GG PP
Sbjct: 300 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP--GGCPP 353
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.1 bits (82), Expect = 0.024
Identities = 25/87 (28%), Positives = 27/87 (31%)
Frame = +3
Query: 888 PPPPXXGGGPXPXTTPG*XTXXXXGGXPPPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXG 1067
PPPP G P P T G G PPP G G PP G
Sbjct: 255 PPPPPAAGSPPPPRT-GSPPPPPTGSPPPPPAG--GSPPPPRAGSPPPPPPPRGSPPTGS 311
Query: 1068 XPPXQKKNXXXPPPXGXXPGXXXXKKK 1148
PP Q P G P K++
Sbjct: 312 LPPPQAGGSPPPAGTGSPPPPPRQKRQ 338
Score = 35.9 bits (79), Expect = 0.055
Identities = 27/87 (31%), Positives = 28/87 (32%), Gaps = 9/87 (10%)
Frame = +3
Query: 891 PPPXXGGGPXPXTTPG*XTXXXXGGXPPPRXGGXGXXXPP---XXXGXXXXXXXGGXXXX 1061
PPP G P P T G PPPR G PP G GG
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
Query: 1062 XG-----XPPXQKKN-XXXPPPXGXXP 1124
G PP QK+ PP G P
Sbjct: 324 AGTGSPPPPPRQKRQAPERSPPTGSPP 350
Score = 33.5 bits (73), Expect = 0.29
Identities = 24/79 (30%), Positives = 24/79 (30%)
Frame = +3
Query: 888 PPPPXXGGGPXPXTTPG*XTXXXXGGXPPPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXG 1067
PPPP G P G G PPP G PP G GG
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTG---SPPPPPTGSPPPPPAGGSP---- 289
Query: 1068 XPPXQKKNXXXPPPXGXXP 1124
PP PPP G P
Sbjct: 290 PPPRAGSPPPPPPPRGSPP 308
Score = 32.3 bits (70), Expect = 0.68
Identities = 22/77 (28%), Positives = 23/77 (29%)
Frame = +3
Query: 780 GGSXPPXXKKXRGXPXXKPXXXXXAGXRXXKXXXXRPPPPXXGGGPXPXTTPG*XTXXXX 959
G PP P P G PPPP G P + P
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP----PPQA 317
Query: 960 GGXPPPRXGGXGXXXPP 1010
GG PPP G G PP
Sbjct: 318 GGSPPP--AGTGSPPPP 332
Score = 31.1 bits (67), Expect = 1.6
Identities = 23/84 (27%), Positives = 24/84 (28%)
Frame = +1
Query: 772 SSGGXAPPXLXKXXXGXPXXSXPXXXXLGXXXKKXXXPXPPPRXRXGGPXXXPPPGKXLX 951
+ G PP P P G PPP P PP G
Sbjct: 250 AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS--- 306
Query: 952 XGXGGXPPPGXGGXAXXXPPXGXG 1023
G PPP GG PP G G
Sbjct: 307 PPTGSLPPPQAGG---SPPPAGTG 327
Score = 30.7 bits (66), Expect = 2.1
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Frame = -3
Query: 1046 PXXXXPPXPXPXGGXXXAX----PPXPGGGXPPXPXXSXLPGGGXXXGPP 909
P PP P P G A PP P G PP P P PP
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 282
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -3
Query: 1046 PXXXXPPXPXPXGGXXXAXPPXPGGGXPPXPXXSXLPGGGXXXGPP 909
P P P P G + PP P GG PP P P G P
Sbjct: 266 PPRTGSPPPPPTG----SPPPPPAGGSPPPPRAGSPPPPPPPRGSP 307
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.1 bits (82), Expect = 0.024
Identities = 25/87 (28%), Positives = 27/87 (31%)
Frame = +3
Query: 888 PPPPXXGGGPXPXTTPG*XTXXXXGGXPPPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXG 1067
PPPP G P P T G G PPP G G PP G
Sbjct: 276 PPPPPAAGSPPPPRT-GSPPPPPTGSPPPPPAG--GSPPPPRAGSPPPPPPPRGSPPTGS 332
Query: 1068 XPPXQKKNXXXPPPXGXXPGXXXXKKK 1148
PP Q P G P K++
Sbjct: 333 LPPPQAGGSPPPAGTGSPPPPPRQKRQ 359
Score = 35.9 bits (79), Expect = 0.055
Identities = 27/87 (31%), Positives = 28/87 (32%), Gaps = 9/87 (10%)
Frame = +3
Query: 891 PPPXXGGGPXPXTTPG*XTXXXXGGXPPPRXGGXGXXXPP---XXXGXXXXXXXGGXXXX 1061
PPP G P P T G PPPR G PP G GG
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
Query: 1062 XG-----XPPXQKKN-XXXPPPXGXXP 1124
G PP QK+ PP G P
Sbjct: 345 AGTGSPPPPPRQKRQAPERSPPTGSPP 371
Score = 33.5 bits (73), Expect = 0.29
Identities = 24/79 (30%), Positives = 24/79 (30%)
Frame = +3
Query: 888 PPPPXXGGGPXPXTTPG*XTXXXXGGXPPPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXG 1067
PPPP G P G G PPP G PP G GG
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTG---SPPPPPTGSPPPPPAGGSP---- 310
Query: 1068 XPPXQKKNXXXPPPXGXXP 1124
PP PPP G P
Sbjct: 311 PPPRAGSPPPPPPPRGSPP 329
Score = 32.3 bits (70), Expect = 0.68
Identities = 22/77 (28%), Positives = 23/77 (29%)
Frame = +3
Query: 780 GGSXPPXXKKXRGXPXXKPXXXXXAGXRXXKXXXXRPPPPXXGGGPXPXTTPG*XTXXXX 959
G PP P P G PPPP G P + P
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP----PPQA 338
Query: 960 GGXPPPRXGGXGXXXPP 1010
GG PPP G G PP
Sbjct: 339 GGSPPP--AGTGSPPPP 353
Score = 31.1 bits (67), Expect = 1.6
Identities = 23/84 (27%), Positives = 24/84 (28%)
Frame = +1
Query: 772 SSGGXAPPXLXKXXXGXPXXSXPXXXXLGXXXKKXXXPXPPPRXRXGGPXXXPPPGKXLX 951
+ G PP P P G PPP P PP G
Sbjct: 271 AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS--- 327
Query: 952 XGXGGXPPPGXGGXAXXXPPXGXG 1023
G PPP GG PP G G
Sbjct: 328 PPTGSLPPPQAGG---SPPPAGTG 348
Score = 30.7 bits (66), Expect = 2.1
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Frame = -3
Query: 1046 PXXXXPPXPXPXGGXXXAX----PPXPGGGXPPXPXXSXLPGGGXXXGPP 909
P PP P P G A PP P G PP P P PP
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 303
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -3
Query: 1046 PXXXXPPXPXPXGGXXXAXPPXPGGGXPPXPXXSXLPGGGXXXGPP 909
P P P P G + PP P GG PP P P G P
Sbjct: 287 PPRTGSPPPPPTG----SPPPPPAGGSPPPPRAGSPPPPPPPRGSP 328
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.1 bits (82), Expect = 0.024
Identities = 25/87 (28%), Positives = 27/87 (31%)
Frame = +3
Query: 888 PPPPXXGGGPXPXTTPG*XTXXXXGGXPPPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXG 1067
PPPP G P P T G G PPP G G PP G
Sbjct: 261 PPPPPAAGSPPPPRT-GSPPPPPTGSPPPPPAG--GSPPPPRAGSPPPPPPPRGSPPTGS 317
Query: 1068 XPPXQKKNXXXPPPXGXXPGXXXXKKK 1148
PP Q P G P K++
Sbjct: 318 LPPPQAGGSPPPAGTGSPPPPPRQKRQ 344
Score = 35.9 bits (79), Expect = 0.055
Identities = 27/87 (31%), Positives = 28/87 (32%), Gaps = 9/87 (10%)
Frame = +3
Query: 891 PPPXXGGGPXPXTTPG*XTXXXXGGXPPPRXGGXGXXXPP---XXXGXXXXXXXGGXXXX 1061
PPP G P P T G PPPR G PP G GG
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
Query: 1062 XG-----XPPXQKKN-XXXPPPXGXXP 1124
G PP QK+ PP G P
Sbjct: 330 AGTGSPPPPPRQKRQAPERSPPTGSPP 356
Score = 33.5 bits (73), Expect = 0.29
Identities = 24/79 (30%), Positives = 24/79 (30%)
Frame = +3
Query: 888 PPPPXXGGGPXPXTTPG*XTXXXXGGXPPPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXG 1067
PPPP G P G G PPP G PP G GG
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTG---SPPPPPTGSPPPPPAGGSP---- 295
Query: 1068 XPPXQKKNXXXPPPXGXXP 1124
PP PPP G P
Sbjct: 296 PPPRAGSPPPPPPPRGSPP 314
Score = 32.3 bits (70), Expect = 0.68
Identities = 22/77 (28%), Positives = 23/77 (29%)
Frame = +3
Query: 780 GGSXPPXXKKXRGXPXXKPXXXXXAGXRXXKXXXXRPPPPXXGGGPXPXTTPG*XTXXXX 959
G PP P P G PPPP G P + P
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP----PPQA 323
Query: 960 GGXPPPRXGGXGXXXPP 1010
GG PPP G G PP
Sbjct: 324 GGSPPP--AGTGSPPPP 338
Score = 31.1 bits (67), Expect = 1.6
Identities = 23/84 (27%), Positives = 24/84 (28%)
Frame = +1
Query: 772 SSGGXAPPXLXKXXXGXPXXSXPXXXXLGXXXKKXXXPXPPPRXRXGGPXXXPPPGKXLX 951
+ G PP P P G PPP P PP G
Sbjct: 256 AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS--- 312
Query: 952 XGXGGXPPPGXGGXAXXXPPXGXG 1023
G PPP GG PP G G
Sbjct: 313 PPTGSLPPPQAGG---SPPPAGTG 333
Score = 30.7 bits (66), Expect = 2.1
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Frame = -3
Query: 1046 PXXXXPPXPXPXGGXXXAX----PPXPGGGXPPXPXXSXLPGGGXXXGPP 909
P PP P P G A PP P G PP P P PP
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 288
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -3
Query: 1046 PXXXXPPXPXPXGGXXXAXPPXPGGGXPPXPXXSXLPGGGXXXGPP 909
P P P P G + PP P GG PP P P G P
Sbjct: 272 PPRTGSPPPPPTG----SPPPPPAGGSPPPPRAGSPPPPPPPRGSP 313
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical protein
C02C6.1b protein.
Length = 838
Score = 36.3 bits (80), Expect = 0.042
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Frame = -3
Query: 1046 PXXXXPPXPXPXGGXXXAXPPXPGGGXPPXP---XXSXLPGGGXXXGPPXL 903
P P P P GG PP G G PP P PGGG PP +
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLI 813
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 36.3 bits (80), Expect = 0.042
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Frame = -3
Query: 1046 PXXXXPPXPXPXGGXXXAXPPXPGGGXPPXP---XXSXLPGGGXXXGPPXL 903
P P P P GG PP G G PP P PGGG PP +
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLI 813
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 35.9 bits (79), Expect = 0.055
Identities = 21/49 (42%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +1
Query: 889 PPPRXRXGGPXXXPPPGKXLXXGXGG-XPPPGXGGXAXXXPPXGXGXGG 1032
PPP GG PP G G GG PPG GG PP G GG
Sbjct: 154 PPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQG--GPPGHGGMGG 200
Score = 33.5 bits (73), Expect = 0.29
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +1
Query: 889 PPPRXRXGGPXXXPPPGKXLXXGXGGXPPPGXGGXAXXXPPXGXG 1023
PP GGP G G G PPPG GG P G G
Sbjct: 174 PPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPG 218
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -3
Query: 1028 PXPXPXGGXXXAXPPXPGGGXPPXPXXSXLPGGGXXXGPPXLXRGGG 888
P P GG PP GG P PG G GPP GG
Sbjct: 154 PPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGG 200
Score = 29.9 bits (64), Expect = 3.6
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Frame = -3
Query: 1016 PXGGXXXAXPPXPGGGXPPXPXXSXLPGG--GXXXGPPXLXRGGG 888
P GG P PGG P P G GPP L GGG
Sbjct: 118 PHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGG 162
Score = 29.5 bits (63), Expect = 4.8
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = +1
Query: 883 PXPPPRXRXGGPXXXPPPGKXLXXGXGGXPPPGXGGXAXXXPPXGXGXGGXXXXG 1047
P PP G P G G GG PPG GG PP G GG G
Sbjct: 164 PRGPPGGMGGPPGHGGMGGPPGHGGQGG--PPGHGGMG-GPPPGQGGPGGPGGPG 215
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 35.9 bits (79), Expect = 0.055
Identities = 21/49 (42%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +1
Query: 889 PPPRXRXGGPXXXPPPGKXLXXGXGG-XPPPGXGGXAXXXPPXGXGXGG 1032
PPP GG PP G G GG PPG GG PP G GG
Sbjct: 434 PPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQG--GPPGHGGMGG 480
Score = 33.5 bits (73), Expect = 0.29
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +1
Query: 889 PPPRXRXGGPXXXPPPGKXLXXGXGGXPPPGXGGXAXXXPPXGXG 1023
PP GGP G G G PPPG GG P G G
Sbjct: 454 PPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPG 498
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -3
Query: 1028 PXPXPXGGXXXAXPPXPGGGXPPXPXXSXLPGGGXXXGPPXLXRGGG 888
P P GG PP GG P PG G GPP GG
Sbjct: 434 PPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGG 480
Score = 29.9 bits (64), Expect = 3.6
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Frame = -3
Query: 1016 PXGGXXXAXPPXPGGGXPPXPXXSXLPGG--GXXXGPPXLXRGGG 888
P GG P PGG P P G GPP L GGG
Sbjct: 398 PHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGG 442
Score = 29.5 bits (63), Expect = 4.8
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = +1
Query: 883 PXPPPRXRXGGPXXXPPPGKXLXXGXGGXPPPGXGGXAXXXPPXGXGXGGXXXXG 1047
P PP G P G G GG PPG GG PP G GG G
Sbjct: 444 PRGPPGGMGGPPGHGGMGGPPGHGGQGG--PPGHGGMG-GPPPGQGGPGGPGGPG 495
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 35.5 bits (78), Expect = 0.073
Identities = 23/76 (30%), Positives = 24/76 (31%)
Frame = +3
Query: 888 PPPPXXGGGPXPXTTPG*XTXXXXGGXPPPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXG 1067
P P GGP P PG G P R GG G PP G G G
Sbjct: 164 PGPAGPPGGPGPPGPPGPEGAPGEDGNTPSR-GGVGEAGPPGPPGTSGNPGTDGAPGNPG 222
Query: 1068 XPPXQKKNXXXPPPXG 1115
P + P P G
Sbjct: 223 APGQVTETPGTPGPAG 238
Score = 30.3 bits (65), Expect = 2.7
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +1
Query: 889 PPPRXRXGGPXXXPPPGKXLXXGXGGXPPPGXGGXAXXXPPXGXGXGG 1032
P P GGP PPG G G P GG PP G G
Sbjct: 164 PGPAGPPGGPGPPGPPGPEGAPGEDGN-TPSRGGVGEAGPPGPPGTSG 210
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 35.1 bits (77), Expect = 0.097
Identities = 24/79 (30%), Positives = 25/79 (31%), Gaps = 1/79 (1%)
Frame = +1
Query: 790 PPXLXKXXXGXPXXSXPXXXX-LGXXXKKXXXPXPPPRXRXGGPXXXPPPGKXLXXGXGG 966
PP G P P G P PPP R G PPP + G G
Sbjct: 303 PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGM 362
Query: 967 XPPPGXGGXAXXXPPXGXG 1023
PPP PP G G
Sbjct: 363 YPPPPPS--RPPAPPSGHG 379
Score = 33.5 bits (73), Expect = 0.29
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -3
Query: 1031 PPXPXPXGGXXXAXPPXPGGGXPPXPXXSXLPGGGXXXGPP 909
PP P P G P PG PP P PG G PP
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +3
Query: 888 PPPPXXGGGPXPXTTPG*XTXXXXGGXPPPRXGGXGXXXPP 1010
PPPP G P P PG PP GG PP
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
Score = 30.3 bits (65), Expect = 2.7
Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 10/60 (16%)
Frame = +1
Query: 883 PXPPPRXRXGGPXXXPPPGKXLXX-GXGGXPPP---------GXGGXAXXXPPXGXGXGG 1032
P PPP P PPPG+ G G PPP G GG PP GG
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 346
Score = 30.3 bits (65), Expect = 2.7
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -3
Query: 1031 PPXPXPXGGXXXAXPPXPGGGXPPXPXXSXLPGGGXXXGPPXLXRGG 891
PP P P PP GG PP P PGG PP G
Sbjct: 317 PPPPPPS----RFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 359
Score = 29.5 bits (63), Expect = 4.8
Identities = 25/103 (24%), Positives = 28/103 (27%)
Frame = +3
Query: 816 GXPXXKPXXXXXAGXRXXKXXXXRPPPPXXGGGPXPXTTPG*XTXXXXGGXPPPRXGGXG 995
G P +P + PPP P P P T PPP G
Sbjct: 239 GRPGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMP--PTPGMTPRPPPPPSSGMW 296
Query: 996 XXXPPXXXGXXXXXXXGGXXXXXGXPPXQKKNXXXPPPXGXXP 1124
PP G G G PP + PP G P
Sbjct: 297 PPPPPPPPGRTP-----GPPGMPGMPPPPPPSRFGPPGMGGMP 334
Score = 29.1 bits (62), Expect = 6.3
Identities = 21/53 (39%), Positives = 21/53 (39%), Gaps = 8/53 (15%)
Frame = +3
Query: 888 PPPPXXGGGPXPXTTPG*XTXXXXG--GXPPP----RXG--GXGXXXPPXXXG 1022
PPPP G P P P T G G PPP R G G G PP G
Sbjct: 288 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 340
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 35.1 bits (77), Expect = 0.097
Identities = 24/79 (30%), Positives = 25/79 (31%), Gaps = 1/79 (1%)
Frame = +1
Query: 790 PPXLXKXXXGXPXXSXPXXXX-LGXXXKKXXXPXPPPRXRXGGPXXXPPPGKXLXXGXGG 966
PP G P P G P PPP R G PPP + G G
Sbjct: 313 PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGM 372
Query: 967 XPPPGXGGXAXXXPPXGXG 1023
PPP PP G G
Sbjct: 373 YPPPPPS--RPPAPPSGHG 389
Score = 33.5 bits (73), Expect = 0.29
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -3
Query: 1031 PPXPXPXGGXXXAXPPXPGGGXPPXPXXSXLPGGGXXXGPP 909
PP P P G P PG PP P PG G PP
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +3
Query: 888 PPPPXXGGGPXPXTTPG*XTXXXXGGXPPPRXGGXGXXXPP 1010
PPPP G P P PG PP GG PP
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
Score = 30.3 bits (65), Expect = 2.7
Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 10/60 (16%)
Frame = +1
Query: 883 PXPPPRXRXGGPXXXPPPGKXLXX-GXGGXPPP---------GXGGXAXXXPPXGXGXGG 1032
P PPP P PPPG+ G G PPP G GG PP GG
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 356
Score = 30.3 bits (65), Expect = 2.7
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -3
Query: 1031 PPXPXPXGGXXXAXPPXPGGGXPPXPXXSXLPGGGXXXGPPXLXRGG 891
PP P P PP GG PP P PGG PP G
Sbjct: 327 PPPPPPS----RFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 369
Score = 29.5 bits (63), Expect = 4.8
Identities = 25/103 (24%), Positives = 28/103 (27%)
Frame = +3
Query: 816 GXPXXKPXXXXXAGXRXXKXXXXRPPPPXXGGGPXPXTTPG*XTXXXXGGXPPPRXGGXG 995
G P +P + PPP P P P T PPP G
Sbjct: 249 GRPGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMP--PTPGMTPRPPPPPSSGMW 306
Query: 996 XXXPPXXXGXXXXXXXGGXXXXXGXPPXQKKNXXXPPPXGXXP 1124
PP G G G PP + PP G P
Sbjct: 307 PPPPPPPPGRTP-----GPPGMPGMPPPPPPSRFGPPGMGGMP 344
Score = 29.1 bits (62), Expect = 6.3
Identities = 21/53 (39%), Positives = 21/53 (39%), Gaps = 8/53 (15%)
Frame = +3
Query: 888 PPPPXXGGGPXPXTTPG*XTXXXXG--GXPPP----RXG--GXGXXXPPXXXG 1022
PPPP G P P P T G G PPP R G G G PP G
Sbjct: 298 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 350
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 34.3 bits (75), Expect = 0.17
Identities = 21/54 (38%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Frame = -3
Query: 1031 PPXPXPXG-GXXXAXPPXPGGG---XPPXPXXSXLPGGGXXXGPPXLXRGGGXG 882
PP P G G + PP P GG PP P GG PP R GG G
Sbjct: 756 PPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRGGGG 809
Score = 28.7 bits (61), Expect = 8.4
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Frame = +1
Query: 889 PPPRXRXGGPXXXPPPGKXLXXG-XGGXPPPGXGGXAXXXPPXG--XGXGG 1032
PPP + G PPP G PPP GG PP G GG
Sbjct: 743 PPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGG 793
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 33.9 bits (74), Expect = 0.22
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -3
Query: 1046 PXXXXPPXPXPXGGXXXAXPPXPGGGXPPXPXXSXLPGGGXXXGPP 909
P P GG PP P G P P + PGGG GPP
Sbjct: 238 PGQPGRPGKNAQGGSSRPGPPGPAG-PPGPPGNNGAPGGGYGVGPP 282
>AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen protein
45 protein.
Length = 327
Score = 32.7 bits (71), Expect = 0.52
Identities = 26/98 (26%), Positives = 29/98 (29%), Gaps = 2/98 (2%)
Frame = +3
Query: 780 GGSXPPXXKKXRGXPXX--KPXXXXXAGXRXXKXXXXRPPPPXXGGGPXPXTTPG*XTXX 953
G + P K RG P +P AG + P PP G P G
Sbjct: 189 GPTGAPGDKGSRGYPGESGEPGTPGSAGPKGNAGPAGPPGPPGYPGRPGETGDHGKTIAG 248
Query: 954 XXGGXPPPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXG 1067
PP R G G PP G GG G
Sbjct: 249 EAPPGPPGRQGEMGPQGPPGPPGPRGKDGAGGEKGAPG 286
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 32.3 bits (70), Expect = 0.68
Identities = 21/57 (36%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = +1
Query: 910 GGPXXX--PPPGKXLXXGXGGXPPPGXGGXAXXXPPXGXGXGGXXXXGXXXXXXXPP 1074
GGP PPPG G G P G GG PP G G G G PP
Sbjct: 404 GGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPP-PPGGPGAYGPPPTGFPPVGAPPP 459
Score = 31.9 bits (69), Expect = 0.90
Identities = 25/87 (28%), Positives = 26/87 (29%), Gaps = 8/87 (9%)
Frame = +3
Query: 888 PPPPXXGG----GPXPXT-TPG*XTXXXXGGXPPPRXGGXGXXXPPXXXGXXXXXXXG-- 1046
PPPP P P + PG P GG G PP G G
Sbjct: 367 PPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPP 426
Query: 1047 -GXXXXXGXPPXQKKNXXXPPPXGXXP 1124
G G PP PPP G P
Sbjct: 427 QGGPGGFGPPPPGGPGAYGPPPTGFPP 453
Score = 30.3 bits (65), Expect = 2.7
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = +1
Query: 889 PPPRXRXGGPXXXPPPGKXLXXGXGGX-PPPGXGGXAXXXPPXGXGXGGXXXXG 1047
PPP G P PP G GG PPP G A PP G G G
Sbjct: 411 PPPPGGPGAPGSYGPP----QGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPG 460
Score = 29.5 bits (63), Expect = 4.8
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 6/54 (11%)
Frame = +1
Query: 889 PPPRXRXGGPXXXPPPGKXLXXGXGGX------PPPGXGGXAXXXPPXGXGXGG 1032
PPP+ G PP G GG PP G G PP G G GG
Sbjct: 380 PPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQG-GPGG 432
Score = 29.1 bits (62), Expect = 6.3
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = +3
Query: 891 PPPXXGGGPXPXTTPG*XTXXXXGGXPPPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXGX 1070
PPP G P PG G PP G G PP G G
Sbjct: 392 PPPSAFGAPQGPGGPG-----GYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGP 446
Query: 1071 PPXQKKNXXXPPP 1109
PP PPP
Sbjct: 447 PPTGFPPVGAPPP 459
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 31.9 bits (69), Expect = 0.90
Identities = 30/114 (26%), Positives = 32/114 (28%), Gaps = 2/114 (1%)
Frame = +3
Query: 780 GGSXPPXXKKXRGXPXXKPXXXXXAGXRXXKXXXXRPPPPXXGGGPXPXTTPG*XTXXXX 959
G + PP K RG G + R P G P P PG T
Sbjct: 311 GNAGPPGFKGDRGLDGLG-GIPGLPGQKGEAGYPGRDGPKGNSGPPGP---PGGGTFNDG 366
Query: 960 GGXPPPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXGXP--PXQKKNXXXPPPXG 1115
PP G G PP G G G P P N P P G
Sbjct: 367 APGPPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPGLPGYPGNEGLPGPKG 420
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 31.9 bits (69), Expect = 0.90
Identities = 30/114 (26%), Positives = 32/114 (28%), Gaps = 2/114 (1%)
Frame = +3
Query: 780 GGSXPPXXKKXRGXPXXKPXXXXXAGXRXXKXXXXRPPPPXXGGGPXPXTTPG*XTXXXX 959
G + PP K RG G + R P G P P PG T
Sbjct: 310 GNAGPPGFKGDRGLDGLG-GIPGLPGQKGEAGYPGRDGPKGNSGPPGP---PGGGTFNDG 365
Query: 960 GGXPPPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXGXP--PXQKKNXXXPPPXG 1115
PP G G PP G G G P P N P P G
Sbjct: 366 APGPPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPGLPGYPGNEGLPGPKG 419
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 31.9 bits (69), Expect = 0.90
Identities = 30/114 (26%), Positives = 32/114 (28%), Gaps = 2/114 (1%)
Frame = +3
Query: 780 GGSXPPXXKKXRGXPXXKPXXXXXAGXRXXKXXXXRPPPPXXGGGPXPXTTPG*XTXXXX 959
G + PP K RG G + R P G P P PG T
Sbjct: 310 GNAGPPGFKGDRGLDGLG-GIPGLPGQKGEAGYPGRDGPKGNSGPPGP---PGGGTFNDG 365
Query: 960 GGXPPPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXGXP--PXQKKNXXXPPPXG 1115
PP G G PP G G G P P N P P G
Sbjct: 366 APGPPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPGLPGYPGNEGLPGPKG 419
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 31.9 bits (69), Expect = 0.90
Identities = 30/114 (26%), Positives = 32/114 (28%), Gaps = 2/114 (1%)
Frame = +3
Query: 780 GGSXPPXXKKXRGXPXXKPXXXXXAGXRXXKXXXXRPPPPXXGGGPXPXTTPG*XTXXXX 959
G + PP K RG G + R P G P P PG T
Sbjct: 311 GNAGPPGFKGDRGLDGLG-GIPGLPGQKGEAGYPGRDGPKGNSGPPGP---PGGGTFNDG 366
Query: 960 GGXPPPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXGXP--PXQKKNXXXPPPXG 1115
PP G G PP G G G P P N P P G
Sbjct: 367 APGPPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPGLPGYPGNEGLPGPKG 420
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 31.9 bits (69), Expect = 0.90
Identities = 30/114 (26%), Positives = 32/114 (28%), Gaps = 2/114 (1%)
Frame = +3
Query: 780 GGSXPPXXKKXRGXPXXKPXXXXXAGXRXXKXXXXRPPPPXXGGGPXPXTTPG*XTXXXX 959
G + PP K RG G + R P G P P PG T
Sbjct: 347 GNAGPPGFKGDRGLDGLG-GIPGLPGQKGEAGYPGRDGPKGNSGPPGP---PGGGTFNDG 402
Query: 960 GGXPPPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXGXP--PXQKKNXXXPPPXG 1115
PP G G PP G G G P P N P P G
Sbjct: 403 APGPPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPGLPGYPGNEGLPGPKG 456
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 31.5 bits (68), Expect = 1.2
Identities = 35/118 (29%), Positives = 36/118 (30%), Gaps = 6/118 (5%)
Frame = +3
Query: 774 LXGGSXPPXXKKXRGXPXXKPXXXXXAGX--RXXKXXXX--RPPP--PXXGGGPXPXTTP 935
L G PP G P KP G R K PPP P G P P P
Sbjct: 93 LPGAQGPPGTPGSAGRPG-KPGAPGLNGNPGRPPKEPCEPLTPPPCKPCPEGPPGPAGPP 151
Query: 936 G*XTXXXXGGXPPPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXGXPPXQKKNXXXPPP 1109
G G P P G G P G GG G PP + N P P
Sbjct: 152 GPDGNKGPLGPPGP-PGPEGPNGEPGNKGPAGPPGPGGKPGPAG-PPGENGNNGEPQP 207
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 31.5 bits (68), Expect = 1.2
Identities = 21/76 (27%), Positives = 22/76 (28%)
Frame = +3
Query: 888 PPPPXXGGGPXPXTTPG*XTXXXXGGXPPPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXG 1067
P P GGP P PG P GG G PP G G G
Sbjct: 177 PGPAGPAGGPGPAGPPG----PAGADGNTPSGGGEGPAGPPGPPGPAGNPGTDGAPGNPG 232
Query: 1068 XPPXQKKNXXXPPPXG 1115
P + P P G
Sbjct: 233 APGQVTETPGTPGPAG 248
Score = 28.7 bits (61), Expect = 8.4
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = -3
Query: 1031 PPXPX-PXGGXXXAXPPXPGGGXPPXPXXSXLPGGGXXXGPP 909
PP P P GG A PP P G P GG GPP
Sbjct: 176 PPGPAGPAGGPGPAGPPGPAGADGNTPSG----GGEGPAGPP 213
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 31.5 bits (68), Expect = 1.2
Identities = 22/80 (27%), Positives = 22/80 (27%)
Frame = +3
Query: 888 PPPPXXGGGPXPXTTPG*XTXXXXGGXPPPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXG 1067
P PP G P PG G PPP G PP G G G
Sbjct: 183 PGPPGPDGNAGPAGAPGVPGPDGDAGSPPP----PGPPGPPGPPGNDGQPGAPGQDGQPG 238
Query: 1068 XPPXQKKNXXXPPPXGXXPG 1127
P N P PG
Sbjct: 239 APGTNTVNSPGGPGPAGPPG 258
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical protein
B0035.1b protein.
Length = 341
Score = 31.1 bits (67), Expect = 1.6
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = -3
Query: 1046 PXXXXPPXPXPXGGXXXAXPPXPGGGXPP-XPXXSXLPGGGXXXGPPXLXR 897
P PP P P G P PG PP P PGG GPP R
Sbjct: 161 PPRGYPPAPAP--GVYMPPPGMPGAYPPPRMPIGHGPPGGPPMPGPPQRSR 209
Score = 30.7 bits (66), Expect = 2.1
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -3
Query: 1031 PPXPXPXGGXXXAXPPXPGGGXPPXPXXSXLPGGGXXXGPP 909
PP P G PP PG PP P GG GPP
Sbjct: 185 PPPRMPIGHGPPGGPPMPG---PPQRSRFDQPDGGDRWGPP 222
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical protein
B0035.1a protein.
Length = 298
Score = 31.1 bits (67), Expect = 1.6
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = -3
Query: 1046 PXXXXPPXPXPXGGXXXAXPPXPGGGXPP-XPXXSXLPGGGXXXGPPXLXR 897
P PP P P G P PG PP P PGG GPP R
Sbjct: 161 PPRGYPPAPAP--GVYMPPPGMPGAYPPPRMPIGHGPPGGPPMPGPPQRSR 209
Score = 30.7 bits (66), Expect = 2.1
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -3
Query: 1031 PPXPXPXGGXXXAXPPXPGGGXPPXPXXSXLPGGGXXXGPP 909
PP P G PP PG PP P GG GPP
Sbjct: 185 PPPRMPIGHGPPGGPPMPG---PPQRSRFDQPDGGDRWGPP 222
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical protein
C09G5.5 protein.
Length = 317
Score = 30.3 bits (65), Expect = 2.7
Identities = 31/123 (25%), Positives = 33/123 (26%), Gaps = 7/123 (5%)
Frame = +3
Query: 780 GGSXPPXXKKXRGX-----PXXKPXXXXXAGXRXXKXXXXRPPPPXXGGGPXPXTTPG*X 944
G PP RG P KP AG + P G P P PG
Sbjct: 92 GPPGPPGASGDRGLDGQPGPAGKPGQPGVAGPAHHQQQECIKCPQ---GAPGPAGAPGNP 148
Query: 945 TXXXXGGXP--PPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXGXPPXQKKNXXXPPPXGX 1118
G P P GG G PP G G G P + P
Sbjct: 149 GPQGPNGNPGAPAHGGGQGPPGPPGPAGDAGSPGQAGAPGNPGRPGQSGQRSRGLPGPSG 208
Query: 1119 XPG 1127
PG
Sbjct: 209 RPG 211
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 2.7
Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Frame = +1
Query: 910 GGPXXXPPPGKXLXXGXGGXPPP-GXGGXAXXXPPXGXGXGGXXXXGXXXXXXXPP 1074
GGP P + G GG PPP G PP G GG G PP
Sbjct: 1449 GGPPMRGMPPLGMMRGRGGPPPPRGMNSPMRGMPPPMRG-GGPPMRGGPPMRGGPP 1503
Score = 29.5 bits (63), Expect = 4.8
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = -3
Query: 1031 PPXPXPXGGXXXAXPPXPGGGXPPXPXXSXLPGGGXXXGPPXLXRGGGXG 882
PP P PP GG PP + GG G P + RGG G
Sbjct: 1468 PPPPRGMNSPMRGMPPPMRGGGPP------MRGGPPMRGGPPMFRGGPPG 1511
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +1
Query: 895 PRXRXGGPXXXPPPGKXLXXGXGGXPPPGXGGXAXXXPPXGXG 1023
P+ R PPP + GG PPP G PP G
Sbjct: 1549 PQNRGPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGG 1591
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -3
Query: 1046 PXXXXPPXPXPXGGXXXAXPPXPGGGXPPXPXXSXLPGGGXXXGPP 909
P PP P P GG P GG PP P +P G P
Sbjct: 70 PNGFIPPPPGP-GGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAP 114
Score = 28.7 bits (61), Expect = 8.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3
Query: 888 PPPPXXGGGPXPXTTPG*XTXXXXGGXPPPRXGGXGXXXPPXXXG 1022
PPPP GG P P GG PPP G PP G
Sbjct: 75 PPPPGPGGIPPP-------PPMFAGGIPPPPPMMGGIPPPPPMFG 112
>Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical protein
T01B7.7 protein.
Length = 348
Score = 29.5 bits (63), Expect = 4.8
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 3/50 (6%)
Frame = -3
Query: 1028 PXPXPXGGXXXAXPPXPG---GGXPPXPXXSXLPGGGXXXGPPXLXRGGG 888
P P P GG + P P G P PGGG GP GGG
Sbjct: 87 PTPNPYGGYGASQPAPPEKFPDGIPNGGNQPKFPGGGFPDGP--FPNGGG 134
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 4.8
Identities = 19/53 (35%), Positives = 19/53 (35%), Gaps = 4/53 (7%)
Frame = -3
Query: 1028 PXPXPXGGXXXAXPPXPGGG----XPPXPXXSXLPGGGXXXGPPXLXRGGGXG 882
P P P GG GGG PP P GGG G GGG G
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGG 102
Score = 29.1 bits (62), Expect = 6.3
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +1
Query: 910 GGPXXXPPPGKXLXX-GXGGXPPPGXGGXAXXXPPXGXGXGG 1032
GG PPP G GG G GG A P G G GG
Sbjct: 44 GGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGG 85
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 4.8
Identities = 19/53 (35%), Positives = 19/53 (35%), Gaps = 4/53 (7%)
Frame = -3
Query: 1028 PXPXPXGGXXXAXPPXPGGG----XPPXPXXSXLPGGGXXXGPPXLXRGGGXG 882
P P P GG GGG PP P GGG G GGG G
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGG 102
Score = 29.1 bits (62), Expect = 6.3
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +1
Query: 910 GGPXXXPPPGKXLXX-GXGGXPPPGXGGXAXXXPPXGXGXGG 1032
GG PPP G GG G GG A P G G GG
Sbjct: 44 GGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGG 85
>M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein ( C.elegans
collagen (rol-6) gene, complete cds. ).
Length = 348
Score = 29.5 bits (63), Expect = 4.8
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 3/50 (6%)
Frame = -3
Query: 1028 PXPXPXGGXXXAXPPXPG---GGXPPXPXXSXLPGGGXXXGPPXLXRGGG 888
P P P GG + P P G P PGGG GP GGG
Sbjct: 87 PTPNPYGGYGASQPAPPEKFPDGIPNGGNQPKFPGGGFPDGP--FPNGGG 134
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical protein
H06A10.2 protein.
Length = 305
Score = 29.1 bits (62), Expect = 6.3
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -3
Query: 1031 PPXPXPXGGXXXAXPPXPGGGXPPXPXXSXLPGGGXXXGPP 909
P P P G A PP P G P + PG GPP
Sbjct: 222 PAGPGPAGPPGPAGPPGPDGASP-----TAAPGAAGPPGPP 257
>Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical protein
R06A4.9 protein.
Length = 809
Score = 29.1 bits (62), Expect = 6.3
Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 6/68 (8%)
Frame = +1
Query: 889 PPPRXRXGGPXXXPP------PGKXLXXGXGGXPPPGXGGXAXXXPPXGXGXGGXXXXGX 1050
PPP R GP P PG+ G PP G PP G G G
Sbjct: 600 PPPNWRHQGPPMSGPGQGYGPPGRMGGNQGGWQRPPPQGSYGGQGPPQGSYGGQGTLQGS 659
Query: 1051 XXXXXXPP 1074
PP
Sbjct: 660 YASQQGPP 667
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical protein
F14F7.1 protein.
Length = 305
Score = 29.1 bits (62), Expect = 6.3
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +1
Query: 883 PXPPPRXRXGGPXXXPPPGKXLXXGXGGXPPPGXGGXAXXXPPXGXGXGG 1032
P P G P PPG+ G G P G G PP G G
Sbjct: 146 PTPCKPCPGGRPGPPGPPGRPGSDGQPGRPATGGGAAPRPGPPGPKGPRG 195
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.1 bits (62), Expect = 6.3
Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 5/68 (7%)
Frame = +1
Query: 790 PPXLXKXXXGXPXXSXPXXXXLGXXXKKXXXPXPPPRX-----RXGGPXXXPPPGKXLXX 954
PP G P LG P PPP G P PPP +
Sbjct: 489 PPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPP--PVGM 546
Query: 955 GXGGXPPP 978
GG PPP
Sbjct: 547 ANGGPPPP 554
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical protein
F54B11.2 protein.
Length = 304
Score = 29.1 bits (62), Expect = 6.3
Identities = 28/121 (23%), Positives = 29/121 (23%), Gaps = 2/121 (1%)
Frame = +3
Query: 759 KKTALLXGGSXPPXXKKXRGXPXXKPXXXXXAGXRXXKXXXXRPPPPXXGGGPXPXTTPG 938
K A+ PP K P P AG P P G P P G
Sbjct: 137 KGAAVPCEAKTPPPCKPCPAGPPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPSGPAG 196
Query: 939 *XTXXXXGGXP-PPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXGXPPXQKKNXXXPP-PX 1112
G P P G P G G G P PP P
Sbjct: 197 PAGNDGAAGTPGPDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTAAPGAAGPPGPP 256
Query: 1113 G 1115
G
Sbjct: 257 G 257
Score = 29.1 bits (62), Expect = 6.3
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -3
Query: 1031 PPXPXPXGGXXXAXPPXPGGGXPPXPXXSXLPGGGXXXGPP 909
P P P G A PP P G P + PG GPP
Sbjct: 221 PAAPGPAGPPGPAGPPGPDGASP-----TAAPGAAGPPGPP 256
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical protein
W01B6.7 protein.
Length = 301
Score = 29.1 bits (62), Expect = 6.3
Identities = 26/118 (22%), Positives = 30/118 (25%), Gaps = 2/118 (1%)
Frame = +3
Query: 780 GGSXPPXXKKXRGXPXXKPXXXXXAGXRXXKXXXXRPPPPXXGGGPXPXTTPG*XTXXXX 959
GGS K + P + P P GG P P G
Sbjct: 110 GGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGP 169
Query: 960 GGXP--PPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXGXPPXQKKNXXXPPPXGXXPG 1127
G P P G G PP G G G P ++ P PG
Sbjct: 170 DGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPG 227
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.1 bits (62), Expect = 6.3
Identities = 26/118 (22%), Positives = 30/118 (25%), Gaps = 2/118 (1%)
Frame = +3
Query: 780 GGSXPPXXKKXRGXPXXKPXXXXXAGXRXXKXXXXRPPPPXXGGGPXPXTTPG*XTXXXX 959
GGS K + P + P P GG P P G
Sbjct: 110 GGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGP 169
Query: 960 GGXP--PPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXGXPPXQKKNXXXPPPXGXXPG 1127
G P P G G PP G G G P ++ P PG
Sbjct: 170 DGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPG 227
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.elegans
(nematode)collagen 2 (col-2) gene, complete cds. ).
Length = 301
Score = 29.1 bits (62), Expect = 6.3
Identities = 26/118 (22%), Positives = 30/118 (25%), Gaps = 2/118 (1%)
Frame = +3
Query: 780 GGSXPPXXKKXRGXPXXKPXXXXXAGXRXXKXXXXRPPPPXXGGGPXPXTTPG*XTXXXX 959
GGS K + P + P P GG P P G
Sbjct: 110 GGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGP 169
Query: 960 GGXP--PPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXGXPPXQKKNXXXPPPXGXXPG 1127
G P P G G PP G G G P ++ P PG
Sbjct: 170 DGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPG 227
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.1 bits (62), Expect = 6.3
Identities = 26/118 (22%), Positives = 30/118 (25%), Gaps = 2/118 (1%)
Frame = +3
Query: 780 GGSXPPXXKKXRGXPXXKPXXXXXAGXRXXKXXXXRPPPPXXGGGPXPXTTPG*XTXXXX 959
GGS K + P + P P GG P P G
Sbjct: 110 GGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGP 169
Query: 960 GGXP--PPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXGXPPXQKKNXXXPPPXGXXPG 1127
G P P G G PP G G G P ++ P PG
Sbjct: 170 DGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPG 227
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.1 bits (62), Expect = 6.3
Identities = 20/70 (28%), Positives = 22/70 (31%)
Frame = +1
Query: 778 GGXAPPXLXKXXXGXPXXSXPXXXXLGXXXKKXXXPXPPPRXRXGGPXXXPPPGKXLXXG 957
GG PP G P P + P PP + R G P PG
Sbjct: 691 GGPPPPG---QPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGYPPPPQPGHPYQQP 747
Query: 958 XGGXPPPGXG 987
G PPP G
Sbjct: 748 YGQMPPPPHG 757
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.1 bits (62), Expect = 6.3
Identities = 20/70 (28%), Positives = 22/70 (31%)
Frame = +1
Query: 778 GGXAPPXLXKXXXGXPXXSXPXXXXLGXXXKKXXXPXPPPRXRXGGPXXXPPPGKXLXXG 957
GG PP G P P + P PP + R G P PG
Sbjct: 691 GGPPPPG---QPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGYPPPPQPGHPYQQP 747
Query: 958 XGGXPPPGXG 987
G PPP G
Sbjct: 748 YGQMPPPPHG 757
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 6.3
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 883 PXPPPRXRXGGPXXXPPPGKXLXXGXGGXPPPG 981
P P P+ G P PPP L PPPG
Sbjct: 565 PPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPG 597
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical protein
C15A11.6 protein.
Length = 316
Score = 28.7 bits (61), Expect = 8.4
Identities = 20/75 (26%), Positives = 22/75 (29%), Gaps = 2/75 (2%)
Frame = +3
Query: 909 GGPXPXTTPG*XTXXXXGGXP--PPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXGXPPXQ 1082
G P P PG G P P + GG G PP G G G P
Sbjct: 139 GLPGPAGAPGQPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKS 198
Query: 1083 KKNXXXPPPXGXXPG 1127
+ P PG
Sbjct: 199 GQRGRGLPGPSGAPG 213
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical protein
C15A11.5 protein.
Length = 316
Score = 28.7 bits (61), Expect = 8.4
Identities = 20/75 (26%), Positives = 22/75 (29%), Gaps = 2/75 (2%)
Frame = +3
Query: 909 GGPXPXTTPG*XTXXXXGGXP--PPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXGXPPXQ 1082
G P P PG G P P + GG G PP G G G P
Sbjct: 139 GLPGPAGVPGQPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKS 198
Query: 1083 KKNXXXPPPXGXXPG 1127
+ P PG
Sbjct: 199 GQRGRGLPGPSGAPG 213
>Z69383-11|CAM06588.1| 110|Caenorhabditis elegans Hypothetical
protein F13E9.15 protein.
Length = 110
Score = 28.7 bits (61), Expect = 8.4
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = +1
Query: 883 PXPPPRXRXGGPXXXPPPGKXLXXGXGGXPPPGXGGXAXXXPPXGXGXGGXXXXG 1047
P PP + GG PG G G G GG P G G G G
Sbjct: 44 PQPPQPGQPGGQQTGSGPGAGQQPGQGQGGNGGMGGQQGGQPGQGNGGMGGGQQG 98
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical protein
C53B4.5 protein.
Length = 289
Score = 28.7 bits (61), Expect = 8.4
Identities = 26/110 (23%), Positives = 31/110 (28%)
Frame = +3
Query: 780 GGSXPPXXKKXRGXPXXKPXXXXXAGXRXXKXXXXRPPPPXXGGGPXPXTTPG*XTXXXX 959
G + PP + +G P P G PP GG P P PG
Sbjct: 144 GPAGPPGPQGNKG-PLGPPGPPGPEGPNGTAGNKGPAGPPGPGGKPGPAGPPG-----EN 197
Query: 960 GGXPPPRXGGXGXXXPPXXXGXXXXXXXGGXXXXXGXPPXQKKNXXXPPP 1109
G P+ G G P G G G P + N P
Sbjct: 198 GRNGEPQPGSPGEPGRPGQPGSRGPAGQPGKDGAQGGPGEKGANGEPGQP 247
>Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical
protein T07C4.9b protein.
Length = 455
Score = 28.7 bits (61), Expect = 8.4
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -3
Query: 986 PXPGGGX-PPXPXXSXLPGGGXXXGPPXLXRGGGXG 882
P PGGG PP P + GGG G GG G
Sbjct: 41 PYPGGGGQPPYPGSNSNQGGGGYPGQGGAPYPGGSG 76
>Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical
protein T07C4.9a protein.
Length = 497
Score = 28.7 bits (61), Expect = 8.4
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -3
Query: 986 PXPGGGX-PPXPXXSXLPGGGXXXGPPXLXRGGGXG 882
P PGGG PP P + GGG G GG G
Sbjct: 83 PYPGGGGQPPYPGSNSNQGGGGYPGQGGAPYPGGSG 118
>U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical protein
F41F3.8 protein.
Length = 118
Score = 28.7 bits (61), Expect = 8.4
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = -3
Query: 1046 PXXXXPPXPXPXGGXXXAXPPXPGGGXPPXPXXSXLPGGGXXXGPPXLXRGG 891
P PP P P PP P P GGG G RGG
Sbjct: 46 PPFAPPPPPSPPLPPKCECPPPTCNSCAPAPSSCGCGGGGGGGGYASYPRGG 97
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical protein
F41F3.3 protein.
Length = 156
Score = 28.7 bits (61), Expect = 8.4
Identities = 24/69 (34%), Positives = 24/69 (34%)
Frame = -3
Query: 1088 FFLXXGGXXXXXXXPXXXXPPXPXPXGGXXXAXPPXPGGGXPPXPXXSXLPGGGXXXGPP 909
F L GG P PP P GG P PP S L GGG PP
Sbjct: 17 FLLPSGGGGGCGCAPPPP-PPSPCGCGGGGGLALPQ----LPPLSLPS-LGGGGGCCPPP 70
Query: 908 XLXRGGGXG 882
GGG G
Sbjct: 71 APACGGGCG 79
>U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protein 175
protein.
Length = 287
Score = 28.7 bits (61), Expect = 8.4
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = +3
Query: 852 AGXRXXKXXXXRPPPPXXGGGPXPXTTPG*XTXXXXGGXPPPRXGGXGXXXPPXXXG 1022
AG R + P PP GG P TPG G P GG G P G
Sbjct: 147 AGPRGPRGDAGPPGPPGNGGRPGQRGTPGEAGTPGPVG-EPGETGGPGPQGRPGQRG 202
>U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protein 15,
isoform a protein.
Length = 780
Score = 28.7 bits (61), Expect = 8.4
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +1
Query: 910 GGPXXXPPPGKXLXXGXGGXPPPGXGGXAXXXPPXGXG 1023
GGP PP + GG PP G GG P G G
Sbjct: 206 GGPAMGQPPPQMGAPNMGG-PPNGYGGYGMMNGPPGSG 242
>U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protein 15,
isoform b protein.
Length = 777
Score = 28.7 bits (61), Expect = 8.4
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +1
Query: 910 GGPXXXPPPGKXLXXGXGGXPPPGXGGXAXXXPPXGXG 1023
GGP PP + GG PP G GG P G G
Sbjct: 203 GGPAMGQPPPQMGAPNMGG-PPNGYGGYGMMNGPPGSG 239
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen protein
112 protein.
Length = 297
Score = 28.7 bits (61), Expect = 8.4
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 5/51 (9%)
Frame = -3
Query: 1046 PXXXXPPXPXPXGGXXXAXPPXPGG-----GXPPXPXXSXLPGGGXXXGPP 909
P P P P G PP P G G P P PG GPP
Sbjct: 137 PITPPPCKPCPQGPPGVQGPPGPAGDAGLDGQPGGPGQDGQPGQPGPKGPP 187
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.147 0.484
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,940,932
Number of Sequences: 27780
Number of extensions: 261007
Number of successful extensions: 1709
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1308
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3203378606
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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