Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_P23
         (1232 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0339 - 22400534-22400647,22401264-22401398,22401491-224015...    99   6e-21
08_02_1576 + 27965862-27965864,27965952-27966026,27966113-279662...    99   8e-21
11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,249...    66   4e-11
08_02_1431 + 27057706-27057900,27058701-27058815,27059123-270591...    31   1.9  
03_06_0617 - 35124114-35124148,35124243-35124335,35124415-351249...    29   9.9  
03_01_0620 - 4566616-4567374,4567455-4567977,4568106-4568635           29   9.9  

>09_06_0339 -
           22400534-22400647,22401264-22401398,22401491-22401565,
           22401646-22401648
          Length = 108

 Score = 99.1 bits (236), Expect = 6e-21
 Identities = 46/85 (54%), Positives = 62/85 (72%)
 Frame = +1

Query: 139 KPSHQQWSKGKVRXKLNNQVLFDKPTYXQLYKEVPQYKLITPAVVSESLKVRGSLAXXAL 318
           K   ++WSKGK + K+NN VLFD+ TY +L  EVP+YK ITP+V+SE L++ GSLA  A+
Sbjct: 22  KQKKKKWSKGKQKEKVNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAM 81

Query: 319 IELREKGLIKQVVQHHGQVIYTRAT 393
            +L ++GLI+ V  H  Q IYTRAT
Sbjct: 82  KDLMDRGLIRMVSVHCSQQIYTRAT 106


>08_02_1576 +
           27965862-27965864,27965952-27966026,27966113-27966247,
           27967080-27967193
          Length = 108

 Score = 98.7 bits (235), Expect = 8e-21
 Identities = 46/85 (54%), Positives = 61/85 (71%)
 Frame = +1

Query: 139 KPSHQQWSKGKVRXKLNNQVLFDKPTYXQLYKEVPQYKLITPAVVSESLKVRGSLAXXAL 318
           K   ++WSKGK + K+NN VLFD+ TY +L  EVP+YK ITP+V+SE L++ GSLA  A+
Sbjct: 22  KQKKKKWSKGKQKEKVNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAI 81

Query: 319 IELREKGLIKQVVQHHGQVIYTRAT 393
            +L  +GLI+ V  H  Q IYTRAT
Sbjct: 82  NDLMTRGLIRMVSVHSSQQIYTRAT 106


>11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,
            2496476-2496577,2496853-2497003,2497173-2497222,
            2497432-2497557,2497761-2497863,2498104-2498204,
            2498540-2498677,2498768-2498911,2499028-2499103,
            2499224-2499309,2499432-2499560,2500572-2500674,
            2500776-2500843,2500912-2501013,2501432-2501527,
            2501723-2501848,2502152-2502254,2502427-2502569,
            2503017-2503154,2503248-2503391,2503535-2503610,
            2503883-2503968,2504135-2504212,2505180-2505254,
            2505362-2505496,2506240-2506272,2507886-2507905,
            2508570-2508666,2508899-2509000,2510612-2510725
          Length = 1126

 Score = 66.5 bits (155), Expect = 4e-11
 Identities = 29/50 (58%), Positives = 38/50 (76%)
 Frame = +1

Query: 139  KPSHQQWSKGKVRXKLNNQVLFDKPTYXQLYKEVPQYKLITPAVVSESLK 288
            K   ++WSKGK + K+NN VLFDK TY +L  EVP+YK ITP+V+SE L+
Sbjct: 956  KQKKKKWSKGKQKEKVNNSVLFDKATYDKLLSEVPKYKQITPSVLSERLR 1005



 Score = 37.1 bits (82), Expect = 0.028
 Identities = 17/35 (48%), Positives = 23/35 (65%)
 Frame = +1

Query: 289  VRGSLAXXALIELREKGLIKQVVQHHGQVIYTRAT 393
            + GSLA  A+ +L  +G I+ V  H  Q+IYTRAT
Sbjct: 1090 INGSLARQAIKDLESRGAIRVVSVHSSQLIYTRAT 1124


>08_02_1431 +
           27057706-27057900,27058701-27058815,27059123-27059170,
           27059272-27059524,27059689-27059776,27059883-27059948,
           27060335-27060403,27060492-27060597,27060639-27060793,
           27061208-27061537
          Length = 474

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -3

Query: 231 VQLXICGFIKQHLVVQLXTNFXFGPLLMTWLCRHRSL 121
           VQL + GFI+ H      TNF  G L   W+C  R L
Sbjct: 315 VQLVLVGFIELHDAFFHSTNFNDGALTYRWICICRRL 351


>03_06_0617 -
           35124114-35124148,35124243-35124335,35124415-35124919,
           35125039-35125238,35125514-35125604,35125699-35126769
          Length = 664

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -3

Query: 132 HRSLPDDXVFFEAVWPKPARPDWAAXFEXKSQGDEGGPSRG 10
           H S  DD    +++  +PA+ + AA F+ + +   GG S G
Sbjct: 258 HNSTIDDVANSDSIMEEPAQEEMAAKFQPRLRPKAGGASPG 298


>03_01_0620 - 4566616-4567374,4567455-4567977,4568106-4568635
          Length = 603

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 350 CLMRPFSLSSMSALLAREPRTFKL 279
           C +RP S +++ AL+AR PR  +L
Sbjct: 217 CYVRPVSFAALEALVARSPRLTRL 240


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,158,032
Number of Sequences: 37544
Number of extensions: 236852
Number of successful extensions: 618
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3794526552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)