Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_P18
         (1180 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006685-2|AAK84573.1|  334|Caenorhabditis elegans Hypothetical ...    65   8e-11
Z81073-9|CAB03030.2|  583|Caenorhabditis elegans Hypothetical pr...    31   2.1  
Z79752-7|CAC70084.1|  583|Caenorhabditis elegans Hypothetical pr...    31   2.1  
Z68227-10|CAA92515.1|   95|Caenorhabditis elegans Hypothetical p...    29   4.8  
Z79755-5|CAB02110.2|  244|Caenorhabditis elegans Hypothetical pr...    29   6.4  
U41273-3|AAA82455.2|  257|Caenorhabditis elegans Hypothetical pr...    29   8.4  

>AC006685-2|AAK84573.1|  334|Caenorhabditis elegans Hypothetical
           protein T13G4.4 protein.
          Length = 334

 Score = 65.3 bits (152), Expect = 8e-11
 Identities = 42/136 (30%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
 Frame = +2

Query: 569 GSVGPYGAHLHDGSEYDGSYADTTSIETMREWHRPRIQALVE--AGVDLLALETIPCQEE 742
           GSVG      HD SEY G+Y D +  +     +   I  L    + +  L  ETIP  +E
Sbjct: 169 GSVGTLATMYHDLSEYTGAYMDQSEAKKTAYDYFKIILTLFHNRSSIRKLIFETIPSADE 228

Query: 743 AETLCDLLREFPGTKAWLAFSCKDDQSIAHGESFQKVAKKCWELNPDQLVAVGVNCCARS 922
                D+L+EFP  +A ++F+ K+   + HGE    VA++  + +P Q++ +G+NC   +
Sbjct: 229 GSVALDVLQEFPEFEAVISFTFKEHGCLRHGEKITSVAQQ-MKQSP-QVLGIGINC---T 283

Query: 923 FVSNLMKGXNDDRPQA 970
             +N++   N+ +P A
Sbjct: 284 DPNNVLPALNELQPFA 299


>Z81073-9|CAB03030.2|  583|Caenorhabditis elegans Hypothetical
           protein F30F8.2 protein.
          Length = 583

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 19/75 (25%), Positives = 32/75 (42%)
 Frame = +2

Query: 560 LIVGSVGPYGAHLHDGSEYDGSYADTTSIETMREWHRPRIQALVEAGVDLLALETIPCQE 739
           L+   +GP   H H G E  G   +  S++  ++ H P I A       LL    +P  +
Sbjct: 225 LVHDDIGPEELHAHVGQEPSGRLFNDISLDHNKKPHNPLINAGAIVVASLLK-NKLPLAD 283

Query: 740 EAETLCDLLREFPGT 784
             + +    R+F G+
Sbjct: 284 RFDFMIHACRKFVGS 298


>Z79752-7|CAC70084.1|  583|Caenorhabditis elegans Hypothetical
           protein F30F8.2 protein.
          Length = 583

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 19/75 (25%), Positives = 32/75 (42%)
 Frame = +2

Query: 560 LIVGSVGPYGAHLHDGSEYDGSYADTTSIETMREWHRPRIQALVEAGVDLLALETIPCQE 739
           L+   +GP   H H G E  G   +  S++  ++ H P I A       LL    +P  +
Sbjct: 225 LVHDDIGPEELHAHVGQEPSGRLFNDISLDHNKKPHNPLINAGAIVVASLLK-NKLPLAD 283

Query: 740 EAETLCDLLREFPGT 784
             + +    R+F G+
Sbjct: 284 RFDFMIHACRKFVGS 298


>Z68227-10|CAA92515.1|   95|Caenorhabditis elegans Hypothetical
           protein F49C12.12 protein.
          Length = 95

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 559 WNVIILNVVTVFFQIEGAGLFSELNCAGY 473
           W VI L ++ VFF I+   LF +L+  G+
Sbjct: 22  WGVIFLGLLGVFFYIQAVTLFPDLHFEGH 50


>Z79755-5|CAB02110.2|  244|Caenorhabditis elegans Hypothetical
           protein F43G9.8 protein.
          Length = 244

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -3

Query: 101 SQKNIXSEEQSETPTTHDATXKXV 30
           +QK    +  SETP+THD T K V
Sbjct: 137 TQKRTTKDGNSETPSTHDGTRKIV 160


>U41273-3|AAA82455.2|  257|Caenorhabditis elegans Hypothetical
           protein C26B9.3 protein.
          Length = 257

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -1

Query: 793 PSL-CTRKLP*KITQCLCFLLTWNCL*CE 710
           PSL C++K+  K+ QC C  L  +C+ C+
Sbjct: 103 PSLPCSKKIDEKVNQCPCAKLEGSCVFCD 131


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,785,380
Number of Sequences: 27780
Number of extensions: 535537
Number of successful extensions: 1347
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1346
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3224247522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)