Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_P17
         (1214 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    27   0.21 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   8.1  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   8.1  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 27.5 bits (58), Expect = 0.21
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 755 NLKLLHSKLCNISAVARWLFRPVAMRL 675
           N+K+L     NI++VA+  FRPV + L
Sbjct: 224 NIKVLDLSFNNITSVAKQFFRPVELSL 250


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 882 DNRDPEC*QHC 914
           DNR P+C Q+C
Sbjct: 556 DNRPPDCGQNC 566


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
 Frame = +2

Query: 689 QAETTNEQLQIYYKVC---YARVLDYRRKFIEAAQRYNELSYRNIIHEDERMTCLRNALI 859
           Q E  ++ L+   K+    +  V + R+ FIE  ++YN +     I  D     L     
Sbjct: 199 QCEIVSDTLRNLDKIVTNGFRNVAESRKIFIECIEQYNVILRYTKIVSDTYQGILVVQFF 258

Query: 860 CTVLA 874
           C+++A
Sbjct: 259 CSLVA 263


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,973
Number of Sequences: 336
Number of extensions: 4726
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35452545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)