Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_P17
         (1214 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0026 - 5086596-5086755,5087035-5087105,5087407-5087466,508...   213   3e-55
04_03_0461 - 16165126-16165419,16165947-16166195,16168510-161686...    30   3.2  
08_01_0319 + 2848751-2848762,2849516-2850449,2850476-2851234,285...    29   7.4  
03_06_0609 - 35042276-35042388,35042476-35042527,35042624-350427...    29   7.4  
08_02_1437 - 27096364-27097252,27098931-27099022,27099382-270996...    29   9.8  

>03_02_0026 -
           5086596-5086755,5087035-5087105,5087407-5087466,
           5087625-5087684,5088012-5088054,5088130-5088221,
           5088304-5088372,5088458-5088502,5089209-5089317,
           5089579-5089679,5089769-5089861,5089936-5089996,
           5090084-5090187,5091592-5091972
          Length = 482

 Score =  213 bits (519), Expect = 3e-55
 Identities = 114/229 (49%), Positives = 151/229 (65%), Gaps = 7/229 (3%)
 Frame = +2

Query: 317 AXVNENVSLVISRQLLTDVSTHLALLADNVSQEVSHFALDVIQPRVISFEEQVASIRQHL 496
           A V++ V LV+SRQLL   +  L  L     +EV+H+AL  IQPRV+SFEEQV  IR+ L
Sbjct: 76  AVVSDEVPLVVSRQLLQTFAQELGRLEPEAQKEVAHYALTQIQPRVVSFEEQVVVIREKL 135

Query: 497 ADIYERNQNWKEAANVLVGIPLETGQKQYSVDYKLETYLKIARLYLEVDDPVQAEAFVNR 676
           A++YE  Q W +AA +L GI L++G +      KL   ++IARLYLE DD V AEAF+N+
Sbjct: 136 AELYESEQQWSKAAQMLSGIDLDSGIRMLDDTNKLSKCVQIARLYLEDDDSVNAEAFINK 195

Query: 677 ASLLQAETTNEQLQIYYKVCYARVLDYRRKFIEAAQRYNELS---YRNI----IHEDERM 835
           AS L   +  E L + YKVCYAR+LD +R+F+EAA RY ++S    R I    I E+   
Sbjct: 196 ASFLVTNSHQELLNLQYKVCYARILDLKRRFLEAALRYYDISQIEQRQIGDEEIDENALE 255

Query: 836 TCLRNALICTVLASAGQQRSRMLATLFKDERGQQLPAYSILXKMYLDRI 982
             L  A+ CT+LA AG QRSR+LATL+KDER  +L  Y IL K++L+RI
Sbjct: 256 QALSAAVTCTILAGAGPQRSRVLATLYKDERCSKLKIYPILQKVFLERI 304


>04_03_0461 -
           16165126-16165419,16165947-16166195,16168510-16168645,
           16171251-16171469,16172738-16173116,16173660-16173918,
           16176052-16176315
          Length = 599

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
 Frame = +2

Query: 491 HLADIYERNQNWKEAAN-VLVGIPLETGQKQYSVDYKL--ETYLKIARLYLE---VDDPV 652
           HL ++   +Q WK+    V +    +   + Y   Y L  E  L + R+ L    V   +
Sbjct: 292 HLKELKAFSQWWKDLYGYVELSHVRDRAVESYLWSYALFYEENLTLTRMILAKIIVFIVL 351

Query: 653 QAEAFVNRASLLQAETTNEQLQIYYKVCYARVLDYRRKFIEAAQRYNELSYRNIIHEDE- 829
             + + + A++ +    NE +Q + +   + + +Y +KF  A Q Y   +   +   D+ 
Sbjct: 352 MDDTYDDHATIEECRKLNEAIQRWDESAISLLPEYMKKFYRALQNYFRETEAQVEASDKY 411

Query: 830 RMTCLR 847
           R+TC++
Sbjct: 412 RVTCMK 417


>08_01_0319 +
           2848751-2848762,2849516-2850449,2850476-2851234,
           2851793-2851850,2851900-2852179
          Length = 680

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 387 HCWLIMFHRRFHTLHLMLYNPELFHLKNRWP 479
           H WL++ H    T   ML   +LFHL    P
Sbjct: 481 HVWLLLAHAGMETFPEMLQRRQLFHLPTEEP 511


>03_06_0609 -
           35042276-35042388,35042476-35042527,35042624-35042725,
           35043546-35043745,35045258-35045336,35045541-35045595,
           35045947-35046122,35046386-35046988,35047077-35047265,
           35048150-35048201,35048289-35048356,35048873-35048911,
           35048912-35048970,35049639-35049782,35050136-35050238,
           35050368-35050467,35050596-35050612
          Length = 716

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +2

Query: 503 IYERNQNWKEAANVLVGIPLETGQKQYSVDYKLETYLKIARLY 631
           + +R +N ++AANV +   L+  QK YSVD+     L+ A  +
Sbjct: 461 LLKRYENNRKAANVAMAALLDGFQKMYSVDFGPLNVLRAAAFH 503


>08_02_1437 -
           27096364-27097252,27098931-27099022,27099382-27099654,
           27099872-27100819
          Length = 733

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 880 SRCQHGAYKGIPEARHPLVFVDNVTI*QFI 791
           S   H  Y  +PE +H L+  D + + QFI
Sbjct: 56  SDSSHATYVSLPEEQHDLILSDTIQLGQFI 85


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,791,165
Number of Sequences: 37544
Number of extensions: 483747
Number of successful extensions: 1280
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1279
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3724688640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)