Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_P16
         (1210 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98185-1|CAA66860.1|  123|Anopheles gambiae histone H2B protein.      171   3e-44
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    26   2.5  

>X98185-1|CAA66860.1|  123|Anopheles gambiae histone H2B protein.
          Length = 123

 Score =  171 bits (417), Expect = 3e-44
 Identities = 87/103 (84%), Positives = 91/103 (88%)
 Frame = +1

Query: 199 NISKXDKXKXXHKXKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASR 378
           NISK DK K     K +  IYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIA + SR
Sbjct: 19  NISKSDKKKKRKTRKRATPIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIARK-SR 77

Query: 379 LAHYNKRSTITSREVQTSVRLLLPGELAKHAVSEGTKAVTKYT 507
           LAHYNKRSTITSRE+QT+VRLLLPGELAKHAVSEGTKAVTKYT
Sbjct: 78  LAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYT 120


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 25.8 bits (54), Expect = 2.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 624 RAFCRCKCNRNTHTNSVRSCISF 556
           R FC   CN +T  N +  CI F
Sbjct: 846 RIFCHWLCNHSTFGNIILVCIMF 868


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 876,842
Number of Sequences: 2352
Number of extensions: 14677
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 137338992
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)