Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_P15
(1208 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 46 1e-05
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 38 0.004
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 29 0.98
SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein Ug... 28 3.0
SPAC821.04c |cid13||poly|Schizosaccharomyces pombe|chr 1|||Manual 27 4.0
SPCC1840.08c |||protein disulfide isomerase |Schizosaccharomyces... 27 5.2
SPAC6C3.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 6.9
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 27 6.9
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 46.0 bits (104), Expect = 1e-05
Identities = 16/61 (26%), Positives = 34/61 (55%)
Frame = +2
Query: 716 WFVMFYGAACVECQRLHAVWESVGATLKSRINVARIDASLAGVNTAKRFHVGKXPAFLLF 895
WF+ FY + C +C + W ++ ++ ++NVA I+ +++ K++ + P FL F
Sbjct: 301 WFIQFYSSECDDCDDVSTAWYAMANRMRGKLNVAHINCAVS-KRACKQYSIQYFPTFLFF 359
Query: 896 R 898
+
Sbjct: 360 K 360
Score = 32.3 bits (70), Expect = 0.14
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +2
Query: 710 GDWFVMFYGAACVECQRLHAVWESVGATLKSRI 808
G WF+ +Y +C C+RL +W+++ K ++
Sbjct: 43 GTWFIKYYLPSCGACKRLGPMWDNMVEKAKEQV 75
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 37.5 bits (83), Expect = 0.004
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 3/115 (2%)
Frame = +2
Query: 359 LLELIXXKXKLIVLFTKQNCETCKKLEQHVESLQEDFKKH-LNAMSVK-TVNSHLARLYN 532
L ELI L+V F C CK L ES ++ +K ++ + V T L Y+
Sbjct: 32 LNELITADKVLMVKFYAPWCGHCKALAPEYESAADELEKDGISLVEVDCTEEGDLCSEYS 91
Query: 533 PSKEPALIFYRHGVAL-LYSGEADENEIYGFFEKNQTPAVKELTDKIFEHLTQAA 694
P L +++G + YSG + + + K P VK ++ E+ + A
Sbjct: 92 IRGYPTLNVFKNGKQISQYSGPRKHDALVKYMRKQLLPTVKPISKDTLENFVEKA 146
Score = 34.3 bits (75), Expect = 0.034
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Frame = +2
Query: 578 LLYSGEADENEIYGFFEKNQTPAVKELTDKIFEHLTQAATGATTGDWFVMFYGAACVECQ 757
L+Y+G+ D I F + P + EL F Q+ G G ++FY +
Sbjct: 210 LVYTGDWDPASIADFIGVSSIPLLDELNQMTFGKYQQS--GLPLG---IIFYNST-ESRD 263
Query: 758 RLHAVWESVGATLKSRINVARIDASLAGVNTAKRFHV-GKXPAFLLFRLGKVYRYDLP 928
L+ V++ + + + A +DA G AK+ +V PAF++ L + +Y P
Sbjct: 264 ELYDVFQPLAKKYQDTLRFAFLDAVRYGA-VAKQMNVESDWPAFVIANLKSMLKYPFP 320
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 29.5 bits (63), Expect = 0.98
Identities = 43/183 (23%), Positives = 66/183 (36%), Gaps = 11/183 (6%)
Frame = +2
Query: 380 KXKLIVLFTKQNCETCKKLEQHVESLQEDFKKHLNAMSVKT---VNSHLARLYNPSKEPA 550
K ++ F C CK L E L F+ H + + K +S +A Y+ + P
Sbjct: 39 KKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGKIDADTHSDVADKYHITGFPT 98
Query: 551 LIFYRHGVA--LLYSGEADENEIYGFF-EKNQTPAVKELTDKIFEHLTQAATGATT---- 709
LI++ + + YS D + + F EK K + L
Sbjct: 99 LIWFPPDGSEPVQYSNARDVDSLTQFVSEKTGIKKRKIVLPSNVVELDSLNFDKVVMDDK 158
Query: 710 GDWFVMFYGAACVECQRLHAVWESVGATLKSRINVARIDASLAGVNTAKRFH-VGKXPAF 886
D V FY C C+RL +E++G K+ NV + + R H V P
Sbjct: 159 KDVLVEFYADWCGYCKRLAPTYETLGKVFKNEPNVEIVKINADVFADIGRLHEVASFPTI 218
Query: 887 LLF 895
F
Sbjct: 219 KFF 221
>SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein
Ugo1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 27.9 bits (59), Expect = 3.0
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 599 DENEIYGFFEKNQTPAVKELTDKIFEHLTQAATGATT 709
DE+EIY +FE T K +T+++ E L A+G T
Sbjct: 103 DEHEIYAYFETPTTE--KAVTEQLAEKLCVDASGYVT 137
>SPAC821.04c |cid13||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 578
Score = 27.5 bits (58), Expect = 4.0
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -2
Query: 1039 FYTPFTTSSMVXQNCHX--FSLEFYTHLEXMXPKISHHF 929
F P+T + + N + ++FYT PK SHHF
Sbjct: 460 FVDPYTYACYINNNSYLPPSYMDFYTWYNSPYPKSSHHF 498
>SPCC1840.08c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 561
Score = 27.1 bits (57), Expect = 5.2
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +2
Query: 497 KTVNSHLARLYNPSKEPALIFYRHGVALLYSGEA-----DENEIYGFFEKNQTPAVKELT 661
+T + + + N ++ P L+ RHGVA YS + + ++ + + P V ELT
Sbjct: 270 RTDDEKVIKTLNVTRLPHLVAIRHGVAFSYSERSVSAMRNTFQLIKWASLLKYPLVPELT 329
Query: 662 DKIFEHL 682
+ E+L
Sbjct: 330 PAVVENL 336
>SPAC6C3.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 269
Score = 26.6 bits (56), Expect = 6.9
Identities = 14/67 (20%), Positives = 30/67 (44%)
Frame = -2
Query: 1012 MVXQNCHXFSLEFYTHLEXMXPKISHHFWQVISVHFAQAKQKECWXFSNMKSFSSVDTS* 833
+ Q+ +E + + ++ H W V +V+ A + + S +K+F ++
Sbjct: 49 LTVQDLKDTRMELNNMIRILTEAMAAHEWTVDNVNIADIQSLQSTIHSTLKNFQKINVLQ 108
Query: 832 TCINASN 812
INAS+
Sbjct: 109 LNINASD 115
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 26.6 bits (56), Expect = 6.9
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +2
Query: 653 ELTDKIFEHLTQAATGATTGDWFVMFYGAACVECQRLHAVWESVGATLKSRINVARID 826
EL K F +A G V+FY C C++L ++ + + L S + V +D
Sbjct: 35 ELNSKNFRKFVKAK-----GPSLVVFYAPWCGYCKKLVPTYQKLASNLHSLLPVTAVD 87
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,805,391
Number of Sequences: 5004
Number of extensions: 68521
Number of successful extensions: 175
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 175
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 653435696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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